RNA–Protein interactions for RNA: ENST00000503850.1

APBB3-207, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 1 (best)

Gene APBB3, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-207ENST00000503850 EIF4A2Q14240 407 aaKnown RBP28.17■■■□□ 2.1
APBB3-207ENST00000503850 USHBP1Q8N6Y0 703 aa28.17■■■□□ 2.1
APBB3-207ENST00000503850 EYA1Q99502 592 aa28.16■■■□□ 2.1
APBB3-207ENST00000503850 NHSQ6T4R5 1651 aa28.14■■■□□ 2.1
APBB3-207ENST00000503850 CC2D1BQ5T0F9 858 aaKnown RBP28.14■■■□□ 2.1
APBB3-207ENST00000503850 DDX54Q8TDD1 881 aaKnown RBP28.14■■■□□ 2.1
APBB3-207ENST00000503850 PCDH11XQ9BZA7 1347 aa28.14■■■□□ 2.09
APBB3-207ENST00000503850 PCDH11YQ9BZA8 1340 aa28.14■■■□□ 2.09
APBB3-207ENST00000503850 EZH2Q15910 746 aaKnown RBP28.13■■■□□ 2.09
APBB3-207ENST00000503850 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.13■■■□□ 2.09
APBB3-207ENST00000503850 IGSF1Q8N6C5 1336 aa28.12■■■□□ 2.09
APBB3-207ENST00000503850 SPG7Q9UQ90 795 aa28.1■■■□□ 2.09
APBB3-207ENST00000503850 RREB1Q92766 1687 aa28.1■■■□□ 2.09
APBB3-207ENST00000503850 SHANK3Q9BYB0 1731 aa28.09■■■□□ 2.09
APBB3-207ENST00000503850 MTHFSP49914 203 aa28.08■■■□□ 2.09
APBB3-207ENST00000503850 PKD1L3Q7Z443 1732 aa28.08■■■□□ 2.09
APBB3-207ENST00000503850 NBPF14Q5TI25 921 aa28.05■■■□□ 2.08
APBB3-207ENST00000503850 ACSBG1Q96GR2 724 aa28.05■■■□□ 2.08
APBB3-207ENST00000503850 KCNQ2O43526 872 aa28.04■■■□□ 2.08
APBB3-207ENST00000503850 IL13P35225 146 aa28.03■■■□□ 2.08
APBB3-207ENST00000503850 KAT6BQ8WYB5 2073 aa28.03■■■□□ 2.08
APBB3-207ENST00000503850 PTF1AQ7RTS3 328 aa28.01■■■□□ 2.07
APBB3-207ENST00000503850 NUP188Q5SRE5 1749 aa28.01■■■□□ 2.07
APBB3-207ENST00000503850 KDRP35968 1356 aa28■■■□□ 2.07
APBB3-207ENST00000503850 AMOTQ4VCS5 1084 aa28■■■□□ 2.07
APBB3-207ENST00000503850 BTAF1O14981 1849 aa27.99■■■□□ 2.07
APBB3-207ENST00000503850 DOT1LQ8TEK3 1739 aa27.99■■■□□ 2.07
APBB3-207ENST00000503850 CYP27B1O15528 508 aa27.99■■■□□ 2.07
APBB3-207ENST00000503850 DIAPH1O60610 1272 aaKnown RBP27.99■■■□□ 2.07
APBB3-207ENST00000503850 NKX1-1Q15270 411 aaPredicted RBP27.99■■■□□ 2.07
APBB3-207ENST00000503850 PRIM1P49642 420 aaKnown RBP27.98■■■□□ 2.07
APBB3-207ENST00000503850 IFNL2Q8IZJ0 200 aa27.98■■■□□ 2.07
APBB3-207ENST00000503850 HMGB2P26583 209 aaKnown RBP27.97■■■□□ 2.07
APBB3-207ENST00000503850 TXNRD1Q16881 649 aa27.97■■■□□ 2.07
APBB3-207ENST00000503850 PLEKHO1Q53GL0 409 aaPredicted RBP27.97■■■□□ 2.07
APBB3-207ENST00000503850 SYTL4Q96C24 671 aaPredicted RBP27.97■■■□□ 2.07
APBB3-207ENST00000503850 CFAP53Q96M91 514 aa27.96■■■□□ 2.07
APBB3-207ENST00000503850 HSP90AB1P08238 724 aaKnown RBP27.95■■■□□ 2.06
APBB3-207ENST00000503850 SULT6B1Q6IMI4 303 aa27.94■■■□□ 2.06
APBB3-207ENST00000503850 PHKG2P15735 406 aa27.93■■■□□ 2.06
APBB3-207ENST00000503850 SLC27A3Q5K4L6 730 aa27.93■■■□□ 2.06
APBB3-207ENST00000503850 PROM2Q8N271 834 aa27.93■■■□□ 2.06
APBB3-207ENST00000503850 CNGB1Q14028 1251 aaPredicted RBP27.92■■■□□ 2.06
APBB3-207ENST00000503850 COL3A1P02461 1466 aaPredicted RBP27.91■■■□□ 2.06
APBB3-207ENST00000503850 R3HDM1Q15032 1099 aaKnown RBP27.91■■■□□ 2.06
APBB3-207ENST00000503850 PSDA5PKW4 1024 aaPredicted RBP27.89■■■□□ 2.06
APBB3-207ENST00000503850 PPP2R1AP30153 589 aa27.89■■■□□ 2.06
APBB3-207ENST00000503850 AEBP1Q8IUX7 1158 aa27.89■■■□□ 2.06
APBB3-207ENST00000503850 DCAF5Q96JK2 942 aa27.87■■■□□ 2.05
APBB3-207ENST00000503850 NUDCQ9Y266 331 aa27.87■■■□□ 2.05
APBB3-207ENST00000503850 C1orf141Q5JVX7 400 aa27.86■■■□□ 2.05
APBB3-207ENST00000503850 ZNF530Q6P9A1 599 aaPredicted RBP27.86■■■□□ 2.05
APBB3-207ENST00000503850 SMARCC1Q92922 1105 aaPredicted RBP27.86■■■□□ 2.05
APBB3-207ENST00000503850 STK32BQ9NY57 414 aa27.86■■■□□ 2.05
APBB3-207ENST00000503850 LY75O60449 1722 aa27.84■■■□□ 2.05
APBB3-207ENST00000503850 TOGARAM1Q9Y4F4 1720 aa27.84■■■□□ 2.05
APBB3-207ENST00000503850 ERVV-2B6SEH9 535 aa27.84■■■□□ 2.05
APBB3-207ENST00000503850 MPRIPQ6WCQ1 1025 aa27.84■■■□□ 2.05
APBB3-207ENST00000503850 DDX10Q13206 875 aaKnown RBP27.83■■■□□ 2.05
APBB3-207ENST00000503850 RALBP1Q15311 655 aa27.83■■■□□ 2.05
APBB3-207ENST00000503850 TMOD3Q9NYL9 352 aa27.83■■■□□ 2.05
APBB3-207ENST00000503850 ITGB4P16144 1822 aa27.83■■■□□ 2.05
APBB3-207ENST00000503850 SLC15A2Q16348 729 aa27.82■■■□□ 2.04
APBB3-207ENST00000503850 U2SURPO15042 1029 aaKnown RBP27.81■■■□□ 2.04
APBB3-207ENST00000503850 HMOX1P09601 288 aa27.81■■■□□ 2.04
APBB3-207ENST00000503850 ANO8Q9HCE9 1232 aaPredicted RBP27.81■■■□□ 2.04
APBB3-207ENST00000503850 LRP5O75197 1615 aa27.81■■■□□ 2.04
APBB3-207ENST00000503850 PAPPAQ13219 1627 aa27.81■■■□□ 2.04
APBB3-207ENST00000503850 AKAP4Q5JQC9 854 aa27.8■■■□□ 2.04
APBB3-207ENST00000503850 PALLDQ8WX93 1383 aa27.79■■■□□ 2.04
APBB3-207ENST00000503850 PIGBQ92521 554 aa27.79■■■□□ 2.04
APBB3-207ENST00000503850 LRRC4BQ9NT99 713 aa27.78■■■□□ 2.04
APBB3-207ENST00000503850 CCNL1Q9UK58 526 aaPredicted RBP27.78■■■□□ 2.04
APBB3-207ENST00000503850 KDM6AO15550 1401 aaPredicted RBP27.75■■■□□ 2.03
APBB3-207ENST00000503850 CABP4P57796 275 aa27.74■■■□□ 2.03
APBB3-207ENST00000503850 GAS2L2Q8NHY3 880 aa27.73■■■□□ 2.03
APBB3-207ENST00000503850 FCHSD2O94868 740 aa27.72■■■□□ 2.03
APBB3-207ENST00000503850 AKT1S1Q96B36 256 aa27.71■■■□□ 2.03
APBB3-207ENST00000503850 SRCAPQ6ZRS2 3230 aa27.7■■■□□ 2.03
APBB3-207ENST00000503850 U2AF1L5P0DN76 240 aaPredicted RBP27.7■■■□□ 2.02
APBB3-207ENST00000503850 U2AF1Q01081 240 aaKnown RBP eCLIP27.7■■■□□ 2.02
APBB3-207ENST00000503850 MTHFSDQ2M296 383 aaKnown RBP27.7■■■□□ 2.02
APBB3-207ENST00000503850 RSPH6AQ9H0K4 717 aa27.7■■■□□ 2.02
APBB3-207ENST00000503850 CASZ1Q86V15 1759 aa27.7■■■□□ 2.02
APBB3-207ENST00000503850 QSER1Q2KHR3 1735 aa27.7■■■□□ 2.02
APBB3-207ENST00000503850 SCN11AQ9UI33 1791 aa27.69■■■□□ 2.02
APBB3-207ENST00000503850 SPON1Q9HCB6 807 aa27.69■■■□□ 2.02
APBB3-207ENST00000503850 LOC102724428A0A0B4J2F2 783 aa27.67■■■□□ 2.02
APBB3-207ENST00000503850 SIK1P57059 783 aa27.67■■■□□ 2.02
APBB3-207ENST00000503850 ZNF827Q17R98 1081 aa27.67■■■□□ 2.02
APBB3-207ENST00000503850 MYBBP1AQ9BQG0 1328 aaKnown RBP27.67■■■□□ 2.02
APBB3-207ENST00000503850 C5P01031 1676 aa27.66■■■□□ 2.02
APBB3-207ENST00000503850 PRKAR2BP31323 418 aa27.66■■■□□ 2.02
APBB3-207ENST00000503850 SLC16A10Q8TF71 515 aa27.66■■■□□ 2.02
APBB3-207ENST00000503850 ATG3Q9NT62 314 aa27.66■■■□□ 2.02
APBB3-207ENST00000503850 TFCP2L1Q9NZI6 479 aa27.66■■■□□ 2.02
APBB3-207ENST00000503850 ASAP1Q9ULH1 1129 aa27.66■■■□□ 2.02
APBB3-207ENST00000503850 RNMTO43148 476 aaKnown RBP27.65■■■□□ 2.02
APBB3-207ENST00000503850 NEFMP07197 916 aa27.65■■■□□ 2.02
APBB3-207ENST00000503850 PNNQ9H307 717 aaKnown RBP27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms