RNA–Protein interactions for RNA: ENST00000503613.5

FBXO38-206, Transcript of F-box protein 38, human

TSL 3

Gene FBXO38, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FBXO38-206	ENST00000503613	NCAPD2	Q15021	1401 aa		13.73	□□□□□ -0.21
FBXO38-206	ENST00000503613	KIAA0232	Q92628	1395 aa		13.73	□□□□□ -0.21
FBXO38-206	ENST00000503613	DCTN1	Q14203	1278 aa		13.73	□□□□□ -0.21
FBXO38-206	ENST00000503613	MVP	Q14764	893 aa	Known RBP	13.73	□□□□□ -0.21
FBXO38-206	ENST00000503613	MTHFSD	Q2M296	383 aa	Known RBP	13.73	□□□□□ -0.21
FBXO38-206	ENST00000503613	ARHGEF25	Q86VW2	580 aa		13.73	□□□□□ -0.21
FBXO38-206	ENST00000503613	FTSJ3	Q8IY81	847 aa	Known RBP	13.73	□□□□□ -0.21
FBXO38-206	ENST00000503613	RTF1	Q92541	710 aa	Known RBP	13.73	□□□□□ -0.21
FBXO38-206	ENST00000503613	PXDN	Q92626	1479 aa		13.73	□□□□□ -0.21
FBXO38-206	ENST00000503613	NPHP3	Q7Z494	1330 aa		13.72	□□□□□ -0.21
FBXO38-206	ENST00000503613	XPC	Q01831	940 aa	Predicted RBP	13.72	□□□□□ -0.21
FBXO38-206	ENST00000503613	TWISTNB	Q3B726	338 aa	Predicted RBP	13.72	□□□□□ -0.21
FBXO38-206	ENST00000503613	ARHGAP45	Q92619	1136 aa		13.72	□□□□□ -0.21
FBXO38-206	ENST00000503613	NOB1	Q9ULX3	412 aa	Known RBP	13.72	□□□□□ -0.21
FBXO38-206	ENST00000503613	TRIM27	P14373	513 aa		13.71	□□□□□ -0.21
FBXO38-206	ENST00000503613	MCM10	Q7L590	875 aa		13.71	□□□□□ -0.21
FBXO38-206	ENST00000503613	MRPL50	Q8N5N7	158 aa	Known RBP	13.71	□□□□□ -0.21
FBXO38-206	ENST00000503613	LTV1	Q96GA3	475 aa	Predicted RBP	13.71	□□□□□ -0.21
FBXO38-206	ENST00000503613	TNN	Q9UQP3	1299 aa		13.71	□□□□□ -0.21
FBXO38-206	ENST00000503613	TNS3	Q68CZ2	1445 aa		13.71	□□□□□ -0.22
FBXO38-206	ENST00000503613	MAP3K5	Q99683	1374 aa		13.71	□□□□□ -0.22
FBXO38-206	ENST00000503613	LMOD2	Q6P5Q4	547 aa		13.7	□□□□□ -0.22
FBXO38-206	ENST00000503613	C8orf58	Q8NAV2	365 aa		13.7	□□□□□ -0.22
FBXO38-206	ENST00000503613	DDX19B	Q9UMR2	479 aa		13.7	□□□□□ -0.22
FBXO38-206	ENST00000503613	KDM3B	Q7LBC6	1761 aa		13.7	□□□□□ -0.22
FBXO38-206	ENST00000503613	GNAT3	A8MTJ3	354 aa		13.69	□□□□□ -0.22
FBXO38-206	ENST00000503613	TSPYL6	Q8N831	410 aa		13.69	□□□□□ -0.22
FBXO38-206	ENST00000503613	BABAM1	Q9NWV8	329 aa		13.69	□□□□□ -0.22
FBXO38-206	ENST00000503613	SIPA1L3	O60292	1781 aa	Predicted RBP	13.68	□□□□□ -0.22
FBXO38-206	ENST00000503613	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.68	□□□□□ -0.22
FBXO38-206	ENST00000503613	NHSL1	Q5SYE7	1610 aa		13.68	□□□□□ -0.22
FBXO38-206	ENST00000503613	ABCA3	Q99758	1704 aa		13.67	□□□□□ -0.22
FBXO38-206	ENST00000503613	NBPF6	Q5VWK0	638 aa		13.67	□□□□□ -0.22
FBXO38-206	ENST00000503613	NBPF4	Q96M43	638 aa		13.67	□□□□□ -0.22
FBXO38-206	ENST00000503613	CHMP4B	Q9H444	224 aa	Known RBP	13.67	□□□□□ -0.22
FBXO38-206	ENST00000503613	ADAMTS7	Q9UKP4	1686 aa		13.66	□□□□□ -0.22
FBXO38-206	ENST00000503613	ZBTB7C	A1YPR0	619 aa		13.66	□□□□□ -0.22
FBXO38-206	ENST00000503613	IGHD	P01880	384 aa		13.66	□□□□□ -0.22
FBXO38-206	ENST00000503613	ANKRD24	Q8TF21	1146 aa		13.66	□□□□□ -0.22
FBXO38-206	ENST00000503613	SCN11A	Q9UI33	1791 aa		13.66	□□□□□ -0.22
FBXO38-206	ENST00000503613	SOS1	Q07889	1333 aa	Predicted RBP	13.65	□□□□□ -0.22
FBXO38-206	ENST00000503613	SPATA31A3	Q5VYP0	1347 aa		13.65	□□□□□ -0.22
FBXO38-206	ENST00000503613	ELL2	O00472	640 aa	Predicted RBP	13.65	□□□□□ -0.22
FBXO38-206	ENST00000503613	ITPRIP	Q8IWB1	547 aa		13.65	□□□□□ -0.22
FBXO38-206	ENST00000503613	TMEM57	Q8N5G2	664 aa		13.65	□□□□□ -0.22
FBXO38-206	ENST00000503613	USHBP1	Q8N6Y0	703 aa		13.65	□□□□□ -0.22
FBXO38-206	ENST00000503613	API5	Q9BZZ5	524 aa	Known RBP	13.65	□□□□□ -0.22
FBXO38-206	ENST00000503613	RWDD1	Q9H446	243 aa	Predicted RBP	13.65	□□□□□ -0.22
FBXO38-206	ENST00000503613	TSPYL4	Q9UJ04	414 aa		13.65	□□□□□ -0.22
FBXO38-206	ENST00000503613	PCDHB15	Q9Y5E8	787 aa		13.65	□□□□□ -0.22
FBXO38-206	ENST00000503613	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.64	□□□□□ -0.23
FBXO38-206	ENST00000503613	OVOS2	A0A0G2JMS6	1433 aa		13.64	□□□□□ -0.23
FBXO38-206	ENST00000503613	PLEKHG2	Q9H7P9	1386 aa		13.64	□□□□□ -0.23
FBXO38-206	ENST00000503613	AMOT	Q4VCS5	1084 aa		13.64	□□□□□ -0.23
FBXO38-206	ENST00000503613	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.64	□□□□□ -0.23
FBXO38-206	ENST00000503613	ABCC4	O15439	1325 aa		13.64	□□□□□ -0.23
FBXO38-206	ENST00000503613	CPD	O75976	1380 aa		13.63	□□□□□ -0.23
FBXO38-206	ENST00000503613	CEMIP	Q8WUJ3	1361 aa		13.63	□□□□□ -0.23
FBXO38-206	ENST00000503613	BRINP3	Q76B58	766 aa		13.63	□□□□□ -0.23
FBXO38-206	ENST00000503613	IL17RE	Q8NFR9	667 aa		13.63	□□□□□ -0.23
FBXO38-206	ENST00000503613	PKD1L3	Q7Z443	1732 aa		13.63	□□□□□ -0.23
FBXO38-206	ENST00000503613	TAF7	Q15545	349 aa	Predicted RBP	13.62	□□□□□ -0.23
FBXO38-206	ENST00000503613	DDX17	Q92841	729 aa	Known RBP	13.62	□□□□□ -0.23
FBXO38-206	ENST00000503613	LRRC59	Q96AG4	307 aa	Known RBP	13.62	□□□□□ -0.23
FBXO38-206	ENST00000503613	ZBTB40	Q9NUA8	1239 aa		13.62	□□□□□ -0.23
FBXO38-206	ENST00000503613	SLAIN2	Q9P270	581 aa		13.62	□□□□□ -0.23
FBXO38-206	ENST00000503613	ERBB3	P21860	1342 aa		13.62	□□□□□ -0.23
FBXO38-206	ENST00000503613	PDE4A	P27815	886 aa		13.61	□□□□□ -0.23
FBXO38-206	ENST00000503613	ZC3H6	P61129	1189 aa	Known RBP	13.61	□□□□□ -0.23
FBXO38-206	ENST00000503613	HDAC1	Q13547	482 aa	Predicted RBP	13.61	□□□□□ -0.23
FBXO38-206	ENST00000503613	AKAP4	Q5JQC9	854 aa		13.61	□□□□□ -0.23
FBXO38-206	ENST00000503613	AXIN2	Q9Y2T1	843 aa		13.61	□□□□□ -0.23
FBXO38-206	ENST00000503613	PARP4	Q9UKK3	1724 aa	Known RBP	13.61	□□□□□ -0.23
FBXO38-206	ENST00000503613	PTPRC	P08575	1304 aa		13.61	□□□□□ -0.23
FBXO38-206	ENST00000503613	SOS2	Q07890	1332 aa	Predicted RBP	13.61	□□□□□ -0.23
FBXO38-206	ENST00000503613	KRT24	Q2M2I5	525 aa		13.6	□□□□□ -0.23
FBXO38-206	ENST00000503613	BACH2	Q9BYV9	841 aa		13.6	□□□□□ -0.23
FBXO38-206	ENST00000503613	RGS12	O14924	1447 aa		13.59	□□□□□ -0.23
FBXO38-206	ENST00000503613	PLEKHG5	O94827	1062 aa		13.59	□□□□□ -0.23
FBXO38-206	ENST00000503613	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.59	□□□□□ -0.23
FBXO38-206	ENST00000503613	MIS18A	Q9NYP9	233 aa		13.59	□□□□□ -0.23
FBXO38-206	ENST00000503613	ZBTB7B	O15156	539 aa	Predicted RBP	13.58	□□□□□ -0.24
FBXO38-206	ENST00000503613	C1orf141	Q5JVX7	400 aa		13.57	□□□□□ -0.24
FBXO38-206	ENST00000503613	INTS3	Q68E01	1043 aa	Known RBP	13.57	□□□□□ -0.24
FBXO38-206	ENST00000503613	SKAP1	Q86WV1	359 aa		13.57	□□□□□ -0.24
FBXO38-206	ENST00000503613	CHMP4A	Q9BY43	222 aa		13.57	□□□□□ -0.24
FBXO38-206	ENST00000503613	CCDC30	Q5VVM6	783 aa		13.56	□□□□□ -0.24
FBXO38-206	ENST00000503613	CABLES1	Q8TDN4	633 aa		13.56	□□□□□ -0.24
FBXO38-206	ENST00000503613	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.56	□□□□□ -0.24	8e-7	■■■■□ 21.3
FBXO38-206	ENST00000503613	RNMT	O43148	476 aa	Known RBP	13.55	□□□□□ -0.24
FBXO38-206	ENST00000503613	SLC4A2	P04920	1241 aa		13.55	□□□□□ -0.24
FBXO38-206	ENST00000503613	HOXB7	P09629	217 aa		13.55	□□□□□ -0.24
FBXO38-206	ENST00000503613	RGS3	P49796	1198 aa		13.55	□□□□□ -0.24
FBXO38-206	ENST00000503613	TEF	Q10587	303 aa		13.55	□□□□□ -0.24
FBXO38-206	ENST00000503613	FAM161A	Q3B820	660 aa		13.55	□□□□□ -0.24
FBXO38-206	ENST00000503613	SMC5	Q8IY18	1101 aa		13.55	□□□□□ -0.24
FBXO38-206	ENST00000503613	RAPGEF4	Q8WZA2	1011 aa		13.55	□□□□□ -0.24
FBXO38-206	ENST00000503613	STK31	Q9BXU1	1019 aa		13.55	□□□□□ -0.24
FBXO38-206	ENST00000503613	LGR6	Q9HBX8	967 aa		13.55	□□□□□ -0.24
FBXO38-206	ENST00000503613	PDZRN3	Q9UPQ7	1066 aa		13.55	□□□□□ -0.24

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