RNA–Protein interactions for RNA: ENST00000503564.5

POLR2J3-207, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 875 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-207ENST00000503564 AMPHP49418 695 aa19.89■□□□□ 0.77
POLR2J3-207ENST00000503564 SLC27A3Q5K4L6 730 aa19.89■□□□□ 0.77
POLR2J3-207ENST00000503564 USP47Q96K76 1375 aa19.89■□□□□ 0.77
POLR2J3-207ENST00000503564 ARXQ96QS3 562 aa19.87■□□□□ 0.77
POLR2J3-207ENST00000503564 PNPLA7Q6ZV29 1317 aa19.86■□□□□ 0.77
POLR2J3-207ENST00000503564 FYB1O15117 783 aa19.86■□□□□ 0.77
POLR2J3-207ENST00000503564 RRS1Q15050 365 aaKnown RBP19.86■□□□□ 0.77
POLR2J3-207ENST00000503564 PRIM1P49642 420 aaKnown RBP19.85■□□□□ 0.77
POLR2J3-207ENST00000503564 ZCRB1Q8TBF4 217 aaKnown RBP19.85■□□□□ 0.77
POLR2J3-207ENST00000503564 TMF1P82094 1093 aa19.84■□□□□ 0.77
POLR2J3-207ENST00000503564 NBPF6Q5VWK0 638 aa19.84■□□□□ 0.77
POLR2J3-207ENST00000503564 SYTL4Q96C24 671 aaPredicted RBP19.84■□□□□ 0.77
POLR2J3-207ENST00000503564 NBPF4Q96M43 638 aa19.84■□□□□ 0.77
POLR2J3-207ENST00000503564 GGNBP2Q9H3C7 697 aa19.84■□□□□ 0.77
POLR2J3-207ENST00000503564 KCNQ4P56696 695 aa19.83■□□□□ 0.77
POLR2J3-207ENST00000503564 SLC16A10Q8TF71 515 aa19.83■□□□□ 0.77
POLR2J3-207ENST00000503564 SMG6Q86US8 1419 aaKnown RBP19.83■□□□□ 0.76
POLR2J3-207ENST00000503564 ANKRD26Q9UPS8 1709 aa19.82■□□□□ 0.76
POLR2J3-207ENST00000503564 TOGARAM1Q9Y4F4 1720 aa19.82■□□□□ 0.76
POLR2J3-207ENST00000503564 C5P01031 1676 aa19.81■□□□□ 0.76
POLR2J3-207ENST00000503564 CGNL1Q0VF96 1302 aa19.81■□□□□ 0.76
POLR2J3-207ENST00000503564 USHBP1Q8N6Y0 703 aa19.81■□□□□ 0.76
POLR2J3-207ENST00000503564 PKD1L3Q7Z443 1732 aa19.81■□□□□ 0.76
POLR2J3-207ENST00000503564 UTRNP46939 3433 aa19.81■□□□□ 0.76
POLR2J3-207ENST00000503564 INSRP06213 1382 aa19.81■□□□□ 0.76
POLR2J3-207ENST00000503564 TAF1LQ8IZX4 1826 aa19.81■□□□□ 0.76
POLR2J3-207ENST00000503564 ZNF784Q8NCA9 323 aaPredicted RBP19.8■□□□□ 0.76
POLR2J3-207ENST00000503564 FLT4P35916 1363 aa19.8■□□□□ 0.76
POLR2J3-207ENST00000503564 KIF24Q5T7B8 1368 aa19.8■□□□□ 0.76
POLR2J3-207ENST00000503564 HSP90AB2PQ58FF8 381 aa19.78■□□□□ 0.76
POLR2J3-207ENST00000503564 TFCP2L1Q9NZI6 479 aa19.78■□□□□ 0.76
POLR2J3-207ENST00000503564 CCNL1Q9UK58 526 aaPredicted RBP19.78■□□□□ 0.76
POLR2J3-207ENST00000503564 ITGB4P16144 1822 aa19.78■□□□□ 0.76
POLR2J3-207ENST00000503564 NCAPD2Q15021 1401 aa19.77■□□□□ 0.76
POLR2J3-207ENST00000503564 RAPGEF4Q8WZA2 1011 aa19.77■□□□□ 0.76
POLR2J3-207ENST00000503564 POLD1P28340 1107 aa19.76■□□□□ 0.75
POLR2J3-207ENST00000503564 NSD3Q9BZ95 1437 aa19.76■□□□□ 0.75
POLR2J3-207ENST00000503564 PCDH11XQ9BZA7 1347 aa19.76■□□□□ 0.75
POLR2J3-207ENST00000503564 PCDH11YQ9BZA8 1340 aa19.76■□□□□ 0.75
POLR2J3-207ENST00000503564 TATP17735 454 aaPredicted RBP19.75■□□□□ 0.75
POLR2J3-207ENST00000503564 CDCA8Q53HL2 280 aa19.75■□□□□ 0.75
POLR2J3-207ENST00000503564 CARD14Q9BXL6 1004 aa19.75■□□□□ 0.75
POLR2J3-207ENST00000503564 MAP2P11137 1827 aaKnown RBP19.72■□□□□ 0.75
POLR2J3-207ENST00000503564 TRIM26Q12899 539 aaPredicted RBP19.72■□□□□ 0.75
POLR2J3-207ENST00000503564 COL23A1Q86Y22 540 aaPredicted RBP19.72■□□□□ 0.75
POLR2J3-207ENST00000503564 KLHL34Q8N239 644 aa19.72■□□□□ 0.75
POLR2J3-207ENST00000503564 NLGN2Q8NFZ4 835 aa19.72■□□□□ 0.75
POLR2J3-207ENST00000503564 EMILIN1Q9Y6C2 1016 aa19.72■□□□□ 0.75
POLR2J3-207ENST00000503564 PALLDQ8WX93 1383 aa19.71■□□□□ 0.75
POLR2J3-207ENST00000503564 C4BP0C0L5 1744 aa19.71■□□□□ 0.75
POLR2J3-207ENST00000503564 CYP27B1O15528 508 aa19.71■□□□□ 0.75
POLR2J3-207ENST00000503564 GPR162Q16538 588 aa19.71■□□□□ 0.75
POLR2J3-207ENST00000503564 UBR3Q6ZT12 1888 aa19.7■□□□□ 0.74
POLR2J3-207ENST00000503564 MSL1Q68DK7 614 aa19.66■□□□□ 0.74
POLR2J3-207ENST00000503564 MPRIPQ6WCQ1 1025 aa19.66■□□□□ 0.74
POLR2J3-207ENST00000503564 MSH5O43196 834 aa19.65■□□□□ 0.74
POLR2J3-207ENST00000503564 NKX1-1Q15270 411 aaPredicted RBP19.65■□□□□ 0.74
POLR2J3-207ENST00000503564 WASHC2AQ641Q2 1341 aa19.65■□□□□ 0.74
POLR2J3-207ENST00000503564 PELP1Q8IZL8 1130 aaKnown RBP19.64■□□□□ 0.73
POLR2J3-207ENST00000503564 YBX3P16989 372 aaKnown RBP eCLIP19.63■□□□□ 0.73
POLR2J3-207ENST00000503564 AMIGO3Q86WK7 504 aa19.63■□□□□ 0.73
POLR2J3-207ENST00000503564 TIMELESSQ9UNS1 1208 aa19.63■□□□□ 0.73
POLR2J3-207ENST00000503564 FLAD1Q8NFF5 587 aa19.62■□□□□ 0.73
POLR2J3-207ENST00000503564 PIGBQ92521 554 aa19.62■□□□□ 0.73
POLR2J3-207ENST00000503564 SMARCC1Q92922 1105 aaPredicted RBP19.62■□□□□ 0.73
POLR2J3-207ENST00000503564 PPM1GO15355 546 aaPredicted RBP19.61■□□□□ 0.73
POLR2J3-207ENST00000503564 HMGB2P26583 209 aaKnown RBP19.61■□□□□ 0.73
POLR2J3-207ENST00000503564 EYA1Q99502 592 aa19.61■□□□□ 0.73
POLR2J3-207ENST00000503564 GOLGB1Q14789 3259 aaKnown RBP19.61■□□□□ 0.73
POLR2J3-207ENST00000503564 C1QTNF8P60827 252 aa19.6■□□□□ 0.73
POLR2J3-207ENST00000503564 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.6■□□□□ 0.73
POLR2J3-207ENST00000503564 POLKQ9UBT6 870 aa19.6■□□□□ 0.73
POLR2J3-207ENST00000503564 SPG7Q9UQ90 795 aa19.6■□□□□ 0.73
POLR2J3-207ENST00000503564 PLEKHG2Q9H7P9 1386 aa19.58■□□□□ 0.73
POLR2J3-207ENST00000503564 CLSPNQ9HAW4 1339 aa19.58■□□□□ 0.73
POLR2J3-207ENST00000503564 AK7Q96M32 723 aa19.58■□□□□ 0.72
POLR2J3-207ENST00000503564 CD2APQ9Y5K6 639 aa19.58■□□□□ 0.72
POLR2J3-207ENST00000503564 GRIN3BO60391 1043 aa19.57■□□□□ 0.72
POLR2J3-207ENST00000503564 LINC00116Q8NCU8 138 aa19.57■□□□□ 0.72
POLR2J3-207ENST00000503564 ZNF831Q5JPB2 1677 aa19.56■□□□□ 0.72
POLR2J3-207ENST00000503564 LOC102724428A0A0B4J2F2 783 aa19.56■□□□□ 0.72
POLR2J3-207ENST00000503564 PHKG2P15735 406 aa19.56■□□□□ 0.72
POLR2J3-207ENST00000503564 SIK1P57059 783 aa19.56■□□□□ 0.72
POLR2J3-207ENST00000503564 EIF4A2Q14240 407 aaKnown RBP19.56■□□□□ 0.72
POLR2J3-207ENST00000503564 SMIM5Q71RC9 77 aa19.56■□□□□ 0.72
POLR2J3-207ENST00000503564 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.55■□□□□ 0.72
POLR2J3-207ENST00000503564 TMOD3Q9NYL9 352 aa19.55■□□□□ 0.72
POLR2J3-207ENST00000503564 KDRP35968 1356 aa19.55■□□□□ 0.72
POLR2J3-207ENST00000503564 COL5A3P25940 1745 aaPredicted RBP19.54■□□□□ 0.72
POLR2J3-207ENST00000503564 SENP3-EIF4A1A0A087X0R7 540 aa19.54■□□□□ 0.72
POLR2J3-207ENST00000503564 PHF14O94880 888 aa19.54■□□□□ 0.72
POLR2J3-207ENST00000503564 SSFA2P28290 1259 aa19.54■□□□□ 0.72
POLR2J3-207ENST00000503564 ITPK1Q13572 414 aa19.54■□□□□ 0.72
POLR2J3-207ENST00000503564 IFNL2Q8IZJ0 200 aa19.54■□□□□ 0.72
POLR2J3-207ENST00000503564 ASAP1Q9ULH1 1129 aa19.54■□□□□ 0.72
POLR2J3-207ENST00000503564 IGSF1Q8N6C5 1336 aa19.53■□□□□ 0.72
POLR2J3-207ENST00000503564 GIGYF1O75420 1035 aaPredicted RBP19.53■□□□□ 0.72
POLR2J3-207ENST00000503564 KIAA1551Q9HCM1 1747 aa19.52■□□□□ 0.72
POLR2J3-207ENST00000503564 KIF13BQ9NQT8 1826 aa19.52■□□□□ 0.72
POLR2J3-207ENST00000503564 ATP10DQ9P241 1426 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms