RNA–Protein interactions for RNA: ENST00000503420.5

CCHCR1-217, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-217ENST00000503420 MEGF6O75095 1541 aa30.03■■■□□ 2.4
CCHCR1-217ENST00000503420 ANKRD26Q9UPS8 1709 aa30.02■■■□□ 2.4
CCHCR1-217ENST00000503420 AMER1Q5JTC6 1135 aaPredicted RBP30.02■■■□□ 2.4
CCHCR1-217ENST00000503420 SYTL4Q96C24 671 aaPredicted RBP30.01■■■□□ 2.39
CCHCR1-217ENST00000503420 EYA1Q99502 592 aa30.01■■■□□ 2.39
CCHCR1-217ENST00000503420 EIF4A2Q14240 407 aaKnown RBP30■■■□□ 2.39
CCHCR1-217ENST00000503420 PCDH11XQ9BZA7 1347 aa29.98■■■□□ 2.39
CCHCR1-217ENST00000503420 PCDH11YQ9BZA8 1340 aa29.98■■■□□ 2.39
CCHCR1-217ENST00000503420 TXNRD1Q16881 649 aa29.98■■■□□ 2.39
CCHCR1-217ENST00000503420 PER1O15534 1290 aaPredicted RBP29.97■■■□□ 2.39
CCHCR1-217ENST00000503420 PRIM1P49642 420 aaKnown RBP29.97■■■□□ 2.39
CCHCR1-217ENST00000503420 SPG7Q9UQ90 795 aa29.97■■■□□ 2.39
CCHCR1-217ENST00000503420 CC2D1BQ5T0F9 858 aaKnown RBP29.96■■■□□ 2.39
CCHCR1-217ENST00000503420 PROM2Q8N271 834 aa29.95■■■□□ 2.39
CCHCR1-217ENST00000503420 NHSQ6T4R5 1651 aa29.94■■■□□ 2.38
CCHCR1-217ENST00000503420 RREB1Q92766 1687 aa29.94■■■□□ 2.38
CCHCR1-217ENST00000503420 RGPD3A6NKT7 1758 aaPredicted RBP29.92■■■□□ 2.38
CCHCR1-217ENST00000503420 RGPD4Q7Z3J3 1758 aa29.92■■■□□ 2.38
CCHCR1-217ENST00000503420 CNGB1Q14028 1251 aaPredicted RBP29.91■■■□□ 2.38
CCHCR1-217ENST00000503420 STK32BQ9NY57 414 aa29.91■■■□□ 2.38
CCHCR1-217ENST00000503420 NUP188Q5SRE5 1749 aa29.91■■■□□ 2.38
CCHCR1-217ENST00000503420 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.9■■■□□ 2.38
CCHCR1-217ENST00000503420 NCAPD2Q15021 1401 aa29.88■■■□□ 2.37
CCHCR1-217ENST00000503420 CYP27B1O15528 508 aa29.87■■■□□ 2.37
CCHCR1-217ENST00000503420 MTHFSP49914 203 aa29.87■■■□□ 2.37
CCHCR1-217ENST00000503420 IGSF1Q8N6C5 1336 aa29.86■■■□□ 2.37
CCHCR1-217ENST00000503420 ANO8Q9HCE9 1232 aaPredicted RBP29.85■■■□□ 2.37
CCHCR1-217ENST00000503420 NPC1L1Q9UHC9 1359 aa29.85■■■□□ 2.37
CCHCR1-217ENST00000503420 SLC27A3Q5K4L6 730 aa29.84■■■□□ 2.37
CCHCR1-217ENST00000503420 BTAF1O14981 1849 aa29.83■■■□□ 2.37
CCHCR1-217ENST00000503420 IFNL2Q8IZJ0 200 aa29.83■■■□□ 2.37
CCHCR1-217ENST00000503420 SLC15A2Q16348 729 aa29.82■■■□□ 2.36
CCHCR1-217ENST00000503420 PLEKHO1Q53GL0 409 aaPredicted RBP29.82■■■□□ 2.36
CCHCR1-217ENST00000503420 MPRIPQ6WCQ1 1025 aa29.82■■■□□ 2.36
CCHCR1-217ENST00000503420 SHANK3Q9BYB0 1731 aa29.82■■■□□ 2.36
CCHCR1-217ENST00000503420 SRCAPQ6ZRS2 3230 aa29.81■■■□□ 2.36
CCHCR1-217ENST00000503420 IL13P35225 146 aa29.8■■■□□ 2.36
CCHCR1-217ENST00000503420 NKX1-1Q15270 411 aaPredicted RBP29.8■■■□□ 2.36
CCHCR1-217ENST00000503420 PLEKHG2Q9H7P9 1386 aa29.79■■■□□ 2.36
CCHCR1-217ENST00000503420 AMOTQ4VCS5 1084 aa29.79■■■□□ 2.36
CCHCR1-217ENST00000503420 SULT6B1Q6IMI4 303 aa29.79■■■□□ 2.36
CCHCR1-217ENST00000503420 DOT1LQ8TEK3 1739 aa29.78■■■□□ 2.36
CCHCR1-217ENST00000503420 PHKG2P15735 406 aa29.77■■■□□ 2.36
CCHCR1-217ENST00000503420 HMGB2P26583 209 aaKnown RBP29.77■■■□□ 2.36
CCHCR1-217ENST00000503420 SPON1Q9HCB6 807 aa29.77■■■□□ 2.36
CCHCR1-217ENST00000503420 LRRC4BQ9NT99 713 aa29.77■■■□□ 2.36
CCHCR1-217ENST00000503420 DIAPH1O60610 1272 aaKnown RBP29.76■■■□□ 2.35
CCHCR1-217ENST00000503420 HSP90AB1P08238 724 aaKnown RBP29.75■■■□□ 2.35
CCHCR1-217ENST00000503420 AEBP1Q8IUX7 1158 aa29.75■■■□□ 2.35
CCHCR1-217ENST00000503420 CCNL1Q9UK58 526 aaPredicted RBP29.75■■■□□ 2.35
CCHCR1-217ENST00000503420 LRP5O75197 1615 aa29.74■■■□□ 2.35
CCHCR1-217ENST00000503420 PKD1L3Q7Z443 1732 aa29.74■■■□□ 2.35
CCHCR1-217ENST00000503420 SMARCC1Q92922 1105 aaPredicted RBP29.74■■■□□ 2.35
CCHCR1-217ENST00000503420 ZNF530Q6P9A1 599 aaPredicted RBP29.73■■■□□ 2.35
CCHCR1-217ENST00000503420 TMOD3Q9NYL9 352 aa29.73■■■□□ 2.35
CCHCR1-217ENST00000503420 KCNQ4P56696 695 aa29.71■■■□□ 2.35
CCHCR1-217ENST00000503420 C1orf141Q5JVX7 400 aa29.71■■■□□ 2.35
CCHCR1-217ENST00000503420 PPP1R1BQ9UD71 204 aaPredicted RBP29.71■■■□□ 2.35
CCHCR1-217ENST00000503420 PIGBQ92521 554 aa29.7■■■□□ 2.35
CCHCR1-217ENST00000503420 CFAP53Q96M91 514 aa29.69■■■□□ 2.34
CCHCR1-217ENST00000503420 DCAF5Q96JK2 942 aa29.68■■■□□ 2.34
CCHCR1-217ENST00000503420 TFCP2L1Q9NZI6 479 aa29.68■■■□□ 2.34
CCHCR1-217ENST00000503420 PALLDQ8WX93 1383 aa29.67■■■□□ 2.34
CCHCR1-217ENST00000503420 ZBTB7AO95365 584 aa29.67■■■□□ 2.34
CCHCR1-217ENST00000503420 HMOX1P09601 288 aa29.67■■■□□ 2.34
CCHCR1-217ENST00000503420 ZNF827Q17R98 1081 aa29.67■■■□□ 2.34
CCHCR1-217ENST00000503420 PDGFDQ9GZP0 370 aaPredicted RBP29.67■■■□□ 2.34
CCHCR1-217ENST00000503420 KDRP35968 1356 aa29.66■■■□□ 2.34
CCHCR1-217ENST00000503420 ERVV-2B6SEH9 535 aa29.66■■■□□ 2.34
CCHCR1-217ENST00000503420 AKT1S1Q96B36 256 aa29.66■■■□□ 2.34
CCHCR1-217ENST00000503420 U2SURPO15042 1029 aaKnown RBP29.65■■■□□ 2.34
CCHCR1-217ENST00000503420 ATF5Q9Y2D1 282 aaPredicted RBP29.64■■■□□ 2.34
CCHCR1-217ENST00000503420 CABP4P57796 275 aa29.62■■■□□ 2.33
CCHCR1-217ENST00000503420 MTFR1LQ9H019 292 aa29.62■■■□□ 2.33
CCHCR1-217ENST00000503420 NUDCQ9Y266 331 aa29.6■■■□□ 2.33
CCHCR1-217ENST00000503420 PAPPAQ13219 1627 aa29.6■■■□□ 2.33
CCHCR1-217ENST00000503420 LY75O60449 1722 aa29.59■■■□□ 2.33
CCHCR1-217ENST00000503420 PPP2R1AP30153 589 aa29.59■■■□□ 2.33
CCHCR1-217ENST00000503420 ASAP1Q9ULH1 1129 aa29.59■■■□□ 2.33
CCHCR1-217ENST00000503420 ITGB4P16144 1822 aa29.58■■■□□ 2.33
CCHCR1-217ENST00000503420 AKAP4Q5JQC9 854 aa29.58■■■□□ 2.33
CCHCR1-217ENST00000503420 SLC16A10Q8TF71 515 aa29.58■■■□□ 2.33
CCHCR1-217ENST00000503420 TOGARAM1Q9Y4F4 1720 aa29.58■■■□□ 2.33
CCHCR1-217ENST00000503420 LOC102724428A0A0B4J2F2 783 aa29.57■■■□□ 2.32
CCHCR1-217ENST00000503420 MSH5O43196 834 aa29.57■■■□□ 2.32
CCHCR1-217ENST00000503420 SIK1P57059 783 aa29.57■■■□□ 2.32
CCHCR1-217ENST00000503420 ATG3Q9NT62 314 aa29.56■■■□□ 2.32
CCHCR1-217ENST00000503420 CASZ1Q86V15 1759 aa29.56■■■□□ 2.32
CCHCR1-217ENST00000503420 ZEB1P37275 1124 aaPredicted RBP29.55■■■□□ 2.32
CCHCR1-217ENST00000503420 PNPLA7Q6ZV29 1317 aa29.54■■■□□ 2.32
CCHCR1-217ENST00000503420 AK7Q96M32 723 aa29.54■■■□□ 2.32
CCHCR1-217ENST00000503420 ATP6V1AP38606 617 aa29.53■■■□□ 2.32
CCHCR1-217ENST00000503420 FLAD1Q8NFF5 587 aa29.53■■■□□ 2.32
CCHCR1-217ENST00000503420 PTGER2P43116 358 aa29.52■■■□□ 2.32
CCHCR1-217ENST00000503420 NFATC2IPQ8NCF5 419 aa29.52■■■□□ 2.32
CCHCR1-217ENST00000503420 MTHFSDQ2M296 383 aaKnown RBP29.51■■■□□ 2.31
CCHCR1-217ENST00000503420 RBM42Q9BTD8 480 aaKnown RBP29.51■■■□□ 2.31
CCHCR1-217ENST00000503420 KDM6AO15550 1401 aaPredicted RBP29.51■■■□□ 2.31
CCHCR1-217ENST00000503420 COL3A1P02461 1466 aaPredicted RBP29.5■■■□□ 2.31
CCHCR1-217ENST00000503420 POLD1P28340 1107 aa29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms