RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 LRRC4BQ9NT99 713 aa22.51■■□□□ 1.19
SCLT1-204ENST00000503215 BTAF1O14981 1849 aa22.51■■□□□ 1.19
SCLT1-204ENST00000503215 SLC15A2Q16348 729 aa22.5■■□□□ 1.19
SCLT1-204ENST00000503215 ZBTB7AO95365 584 aa22.5■■□□□ 1.19
SCLT1-204ENST00000503215 STK32BQ9NY57 414 aa22.5■■□□□ 1.19
SCLT1-204ENST00000503215 CGNL1Q0VF96 1302 aa22.49■■□□□ 1.19
SCLT1-204ENST00000503215 SYTL4Q96C24 671 aaPredicted RBP22.49■■□□□ 1.19
SCLT1-204ENST00000503215 PANK3Q9H999 370 aa22.49■■□□□ 1.19
SCLT1-204ENST00000503215 SHANK3Q9BYB0 1731 aa22.48■■□□□ 1.19
SCLT1-204ENST00000503215 TNNT2P45379 298 aaPredicted RBP22.48■■□□□ 1.19
SCLT1-204ENST00000503215 KCNQ4P56696 695 aa22.48■■□□□ 1.19
SCLT1-204ENST00000503215 RAPGEF4Q8WZA2 1011 aa22.48■■□□□ 1.19
SCLT1-204ENST00000503215 SMG6Q86US8 1419 aaKnown RBP22.48■■□□□ 1.19
SCLT1-204ENST00000503215 POLKQ9UBT6 870 aa22.47■■□□□ 1.19
SCLT1-204ENST00000503215 KIF24Q5T7B8 1368 aa22.47■■□□□ 1.19
SCLT1-204ENST00000503215 CASZ1Q86V15 1759 aa22.47■■□□□ 1.19
SCLT1-204ENST00000503215 NSD2O96028 1365 aa22.46■■□□□ 1.19
SCLT1-204ENST00000503215 ZNF827Q17R98 1081 aa22.46■■□□□ 1.19
SCLT1-204ENST00000503215 ATF5Q9Y2D1 282 aaPredicted RBP22.46■■□□□ 1.19
SCLT1-204ENST00000503215 TATP17735 454 aaPredicted RBP22.45■■□□□ 1.18
SCLT1-204ENST00000503215 PPP1R1BQ9UD71 204 aaPredicted RBP22.44■■□□□ 1.18
SCLT1-204ENST00000503215 WASHC2AQ641Q2 1341 aa22.43■■□□□ 1.18
SCLT1-204ENST00000503215 PTGER2P43116 358 aa22.42■■□□□ 1.18
SCLT1-204ENST00000503215 EYA1Q99502 592 aa22.42■■□□□ 1.18
SCLT1-204ENST00000503215 PAPPAQ13219 1627 aa22.42■■□□□ 1.18
SCLT1-204ENST00000503215 CYP27B1O15528 508 aa22.41■■□□□ 1.18
SCLT1-204ENST00000503215 DOT1LQ8TEK3 1739 aa22.41■■□□□ 1.18
SCLT1-204ENST00000503215 MAP2P11137 1827 aaKnown RBP22.4■■□□□ 1.18
SCLT1-204ENST00000503215 AKT1S1Q96B36 256 aa22.39■■□□□ 1.18
SCLT1-204ENST00000503215 ANKRD26Q9UPS8 1709 aa22.38■■□□□ 1.17
SCLT1-204ENST00000503215 NCAPD2Q15021 1401 aa22.38■■□□□ 1.17
SCLT1-204ENST00000503215 EIF4A2Q14240 407 aaKnown RBP22.38■■□□□ 1.17
SCLT1-204ENST00000503215 SLC27A3Q5K4L6 730 aa22.38■■□□□ 1.17
SCLT1-204ENST00000503215 PCDH11XQ9BZA7 1347 aa22.37■■□□□ 1.17
SCLT1-204ENST00000503215 PCDH11YQ9BZA8 1340 aa22.37■■□□□ 1.17
SCLT1-204ENST00000503215 SGIP1Q9BQI5 828 aa22.36■■□□□ 1.17
SCLT1-204ENST00000503215 MTFR1LQ9H019 292 aa22.36■■□□□ 1.17
SCLT1-204ENST00000503215 MPRIPQ6WCQ1 1025 aa22.34■■□□□ 1.17
SCLT1-204ENST00000503215 CCNL1Q9UK58 526 aaPredicted RBP22.34■■□□□ 1.17
SCLT1-204ENST00000503215 KIF7Q2M1P5 1343 aa22.32■■□□□ 1.16
SCLT1-204ENST00000503215 PNPLA7Q6ZV29 1317 aa22.32■■□□□ 1.16
SCLT1-204ENST00000503215 MORC1Q86VD1 984 aa22.31■■□□□ 1.16
SCLT1-204ENST00000503215 TFCP2L1Q9NZI6 479 aa22.31■■□□□ 1.16
SCLT1-204ENST00000503215 LY75O60449 1722 aa22.31■■□□□ 1.16
SCLT1-204ENST00000503215 SPG7Q9UQ90 795 aa22.3■■□□□ 1.16
SCLT1-204ENST00000503215 PKD1L3Q7Z443 1732 aa22.3■■□□□ 1.16
SCLT1-204ENST00000503215 NKX1-1Q15270 411 aaPredicted RBP22.29■■□□□ 1.16
SCLT1-204ENST00000503215 PIGBQ92521 554 aa22.29■■□□□ 1.16
SCLT1-204ENST00000503215 FHDC1Q9C0D6 1143 aaPredicted RBP22.29■■□□□ 1.16
SCLT1-204ENST00000503215 KNSTRNQ9Y448 316 aa22.29■■□□□ 1.16
SCLT1-204ENST00000503215 TOGARAM1Q9Y4F4 1720 aa22.29■■□□□ 1.16
SCLT1-204ENST00000503215 AMER1Q5JTC6 1135 aaPredicted RBP22.27■■□□□ 1.16
SCLT1-204ENST00000503215 SYT17Q9BSW7 474 aa22.26■■□□□ 1.15
SCLT1-204ENST00000503215 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.26■■□□□ 1.157e-6■■□□□ 12.8
SCLT1-204ENST00000503215 IGSF1Q8N6C5 1336 aa22.26■■□□□ 1.15
SCLT1-204ENST00000503215 PALLDQ8WX93 1383 aa22.26■■□□□ 1.15
SCLT1-204ENST00000503215 PHKG2P15735 406 aa22.25■■□□□ 1.15
SCLT1-204ENST00000503215 ARXQ96QS3 562 aa22.25■■□□□ 1.15
SCLT1-204ENST00000503215 TUBGCP6Q96RT7 1819 aa22.25■■□□□ 1.15
SCLT1-204ENST00000503215 COL23A1Q86Y22 540 aaPredicted RBP22.25■■□□□ 1.15
SCLT1-204ENST00000503215 AEBP1Q8IUX7 1158 aa22.25■■□□□ 1.15
SCLT1-204ENST00000503215 ITGB4P16144 1822 aa22.23■■□□□ 1.15
SCLT1-204ENST00000503215 PER1O15534 1290 aaPredicted RBP22.23■■□□□ 1.15
SCLT1-204ENST00000503215 IFNL2Q8IZJ0 200 aa22.23■■□□□ 1.15
SCLT1-204ENST00000503215 SLC16A10Q8TF71 515 aa22.23■■□□□ 1.15
SCLT1-204ENST00000503215 SMIM5Q71RC9 77 aa22.22■■□□□ 1.15
SCLT1-204ENST00000503215 AMIGO3Q86WK7 504 aa22.22■■□□□ 1.15
SCLT1-204ENST00000503215 ASAP1Q9ULH1 1129 aa22.22■■□□□ 1.15
SCLT1-204ENST00000503215 QSER1Q2KHR3 1735 aa22.2■■□□□ 1.14
SCLT1-204ENST00000503215 MSH5O43196 834 aa22.2■■□□□ 1.14
SCLT1-204ENST00000503215 SMARCC1Q92922 1105 aaPredicted RBP22.2■■□□□ 1.14
SCLT1-204ENST00000503215 TMOD3Q9NYL9 352 aa22.2■■□□□ 1.14
SCLT1-204ENST00000503215 IL13P35225 146 aa22.19■■□□□ 1.14
SCLT1-204ENST00000503215 CC2D1BQ5T0F9 858 aaKnown RBP22.18■■□□□ 1.14
SCLT1-204ENST00000503215 LOC102724428A0A0B4J2F2 783 aa22.17■■□□□ 1.14
SCLT1-204ENST00000503215 YY1P25490 414 aa22.17■■□□□ 1.14
SCLT1-204ENST00000503215 MTHFSP49914 203 aa22.17■■□□□ 1.14
SCLT1-204ENST00000503215 SIK1P57059 783 aa22.17■■□□□ 1.14
SCLT1-204ENST00000503215 MSL1Q68DK7 614 aa22.17■■□□□ 1.14
SCLT1-204ENST00000503215 SULT6B1Q6IMI4 303 aa22.17■■□□□ 1.14
SCLT1-204ENST00000503215 ATG3Q9NT62 314 aa22.17■■□□□ 1.14
SCLT1-204ENST00000503215 C5P01031 1676 aa22.16■■□□□ 1.14
SCLT1-204ENST00000503215 DCAF8L1A6NGE4 600 aa22.16■■□□□ 1.14
SCLT1-204ENST00000503215 CNGB1Q14028 1251 aaPredicted RBP22.16■■□□□ 1.14
SCLT1-204ENST00000503215 PLEKHO1Q53GL0 409 aaPredicted RBP22.16■■□□□ 1.14
SCLT1-204ENST00000503215 ZNF530Q6P9A1 599 aaPredicted RBP22.16■■□□□ 1.14
SCLT1-204ENST00000503215 KLHL34Q8N239 644 aa22.16■■□□□ 1.14
SCLT1-204ENST00000503215 LINC00116Q8NCU8 138 aa22.16■■□□□ 1.14
SCLT1-204ENST00000503215 POLD1P28340 1107 aa22.15■■□□□ 1.14
SCLT1-204ENST00000503215 ITPK1Q13572 414 aa22.15■■□□□ 1.14
SCLT1-204ENST00000503215 TAF1LQ8IZX4 1826 aa22.14■■□□□ 1.14
SCLT1-204ENST00000503215 COL24A1Q17RW2 1714 aa22.13■■□□□ 1.13
SCLT1-204ENST00000503215 KDM6AO15550 1401 aaPredicted RBP22.13■■□□□ 1.13
SCLT1-204ENST00000503215 MAP3K5Q99683 1374 aa22.12■■□□□ 1.13
SCLT1-204ENST00000503215 C4BP0C0L5 1744 aa22.12■■□□□ 1.13
SCLT1-204ENST00000503215 PHF14O94880 888 aa22.12■■□□□ 1.13
SCLT1-204ENST00000503215 NLGN2Q8NFZ4 835 aa22.12■■□□□ 1.13
SCLT1-204ENST00000503215 DCAF5Q96JK2 942 aa22.12■■□□□ 1.13
SCLT1-204ENST00000503215 AK7Q96M32 723 aa22.12■■□□□ 1.13
SCLT1-204ENST00000503215 SLC4A9Q96Q91 983 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms