RNA–Protein interactions for RNA: ENST00000503180.5

DDR1-248, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-248ENST00000503180 LRRC37A3O60309 1634 aa21.23■□□□□ 0.99
DDR1-248ENST00000503180 SULT6B1Q6IMI4 303 aa21.23■□□□□ 0.99
DDR1-248ENST00000503180 PARD3Q8TEW0 1356 aa21.23■□□□□ 0.99
DDR1-248ENST00000503180 BAG6P46379 1132 aa21.22■□□□□ 0.99
DDR1-248ENST00000503180 NCAPD2Q15021 1401 aa21.21■□□□□ 0.99
DDR1-248ENST00000503180 MEGF6O75095 1541 aa21.21■□□□□ 0.99
DDR1-248ENST00000503180 BCL9O00512 1426 aa21.21■□□□□ 0.99
DDR1-248ENST00000503180 U2SURPO15042 1029 aaKnown RBP21.2■□□□□ 0.98
DDR1-248ENST00000503180 APBA3O96018 575 aa21.2■□□□□ 0.98
DDR1-248ENST00000503180 PLEKHO1Q53GL0 409 aaPredicted RBP21.2■□□□□ 0.98
DDR1-248ENST00000503180 BCL11BQ9C0K0 894 aaPredicted RBP21.2■□□□□ 0.98
DDR1-248ENST00000503180 PCDH11XQ9BZA7 1347 aa21.2■□□□□ 0.98
DDR1-248ENST00000503180 PCDH11YQ9BZA8 1340 aa21.2■□□□□ 0.98
DDR1-248ENST00000503180 AMOTQ4VCS5 1084 aa21.19■□□□□ 0.98
DDR1-248ENST00000503180 PLEKHG2Q9H7P9 1386 aa21.19■□□□□ 0.98
DDR1-248ENST00000503180 AEBP1Q8IUX7 1158 aa21.17■□□□□ 0.98
DDR1-248ENST00000503180 HMOX1P09601 288 aa21.16■□□□□ 0.98
DDR1-248ENST00000503180 DEFB132Q7Z7B7 95 aa21.16■□□□□ 0.98
DDR1-248ENST00000503180 IFNL2Q8IZJ0 200 aa21.16■□□□□ 0.98
DDR1-248ENST00000503180 KDRP35968 1356 aa21.15■□□□□ 0.98
DDR1-248ENST00000503180 ACSBG1Q96GR2 724 aa21.15■□□□□ 0.98
DDR1-248ENST00000503180 MYBBP1AQ9BQG0 1328 aaKnown RBP21.14■□□□□ 0.97
DDR1-248ENST00000503180 CYP27B1O15528 508 aa21.14■□□□□ 0.97
DDR1-248ENST00000503180 PRKRIP1Q9H875 184 aaPredicted RBP21.14■□□□□ 0.97
DDR1-248ENST00000503180 KCNQ2O43526 872 aa21.13■□□□□ 0.97
DDR1-248ENST00000503180 EN1Q05925 392 aaPredicted RBP21.13■□□□□ 0.97
DDR1-248ENST00000503180 SYTL4Q96C24 671 aaPredicted RBP21.13■□□□□ 0.97
DDR1-248ENST00000503180 RGPD1P0DJD0 1748 aa21.12■□□□□ 0.97
DDR1-248ENST00000503180 PLSCR1O15162 318 aa21.12■□□□□ 0.97
DDR1-248ENST00000503180 HSP90AB1P08238 724 aaKnown RBP21.12■□□□□ 0.97
DDR1-248ENST00000503180 U2AF1L5P0DN76 240 aaPredicted RBP21.12■□□□□ 0.97
DDR1-248ENST00000503180 U2AF1Q01081 240 aaKnown RBP eCLIP21.12■□□□□ 0.97
DDR1-248ENST00000503180 NKX1-1Q15270 411 aaPredicted RBP21.12■□□□□ 0.97
DDR1-248ENST00000503180 PHKG2P15735 406 aa21.11■□□□□ 0.97
DDR1-248ENST00000503180 PRIM1P49642 420 aaKnown RBP21.11■□□□□ 0.97
DDR1-248ENST00000503180 C1orf141Q5JVX7 400 aa21.11■□□□□ 0.97
DDR1-248ENST00000503180 COL3A1P02461 1466 aaPredicted RBP21.11■□□□□ 0.97
DDR1-248ENST00000503180 KAT6BQ8WYB5 2073 aa21.1■□□□□ 0.97
DDR1-248ENST00000503180 FCHSD2O94868 740 aa21.1■□□□□ 0.97
DDR1-248ENST00000503180 ZNF530Q6P9A1 599 aaPredicted RBP21.1■□□□□ 0.97
DDR1-248ENST00000503180 CAMKK2Q96RR4 588 aa21.09■□□□□ 0.97
DDR1-248ENST00000503180 ANP32CO43423 234 aa21.08■□□□□ 0.97
DDR1-248ENST00000503180 PTF1AQ7RTS3 328 aa21.08■□□□□ 0.97
DDR1-248ENST00000503180 PNNQ9H307 717 aaKnown RBP21.08■□□□□ 0.97
DDR1-248ENST00000503180 SBF2Q86WG5 1849 aa21.07■□□□□ 0.96
DDR1-248ENST00000503180 EZH2Q15910 746 aaKnown RBP21.07■□□□□ 0.96
DDR1-248ENST00000503180 DCAF5Q96JK2 942 aa21.07■□□□□ 0.96
DDR1-248ENST00000503180 NEFMP07197 916 aa21.06■□□□□ 0.96
DDR1-248ENST00000503180 PKD1L3Q7Z443 1732 aa21.06■□□□□ 0.96
DDR1-248ENST00000503180 AKAP4Q5JQC9 854 aa21.05■□□□□ 0.96
DDR1-248ENST00000503180 MPRIPQ6WCQ1 1025 aa21.05■□□□□ 0.96
DDR1-248ENST00000503180 ERVV-2B6SEH9 535 aa21.04■□□□□ 0.96
DDR1-248ENST00000503180 PRKAR2BP31323 418 aa21.04■□□□□ 0.96
DDR1-248ENST00000503180 RSPH6AQ9H0K4 717 aa21.04■□□□□ 0.96
DDR1-248ENST00000503180 SHANK3Q9BYB0 1731 aa21.04■□□□□ 0.96
DDR1-248ENST00000503180 MTHFSDQ2M296 383 aaKnown RBP21.03■□□□□ 0.96
DDR1-248ENST00000503180 GAS2L2Q8NHY3 880 aa21.03■□□□□ 0.96
DDR1-248ENST00000503180 TNS1Q9HBL0 1735 aaKnown RBP21.03■□□□□ 0.96
DDR1-248ENST00000503180 TMOD3Q9NYL9 352 aa21.02■□□□□ 0.96
DDR1-248ENST00000503180 NBPF14Q5TI25 921 aa21.01■□□□□ 0.95
DDR1-248ENST00000503180 NHSQ6T4R5 1651 aa21.01■□□□□ 0.95
DDR1-248ENST00000503180 WDR43Q15061 677 aaKnown RBP eCLIP21■□□□□ 0.95
DDR1-248ENST00000503180 TXNRD1Q16881 649 aa21■□□□□ 0.95
DDR1-248ENST00000503180 HMGB2P26583 209 aaKnown RBP20.99■□□□□ 0.95
DDR1-248ENST00000503180 CABP4P57796 275 aa20.99■□□□□ 0.95
DDR1-248ENST00000503180 PIGBQ92521 554 aa20.99■□□□□ 0.95
DDR1-248ENST00000503180 SMARCC1Q92922 1105 aaPredicted RBP20.99■□□□□ 0.95
DDR1-248ENST00000503180 PHACTR3Q96KR7 559 aa20.99■□□□□ 0.95
DDR1-248ENST00000503180 GNAT3A8MTJ3 354 aa20.98■□□□□ 0.95
DDR1-248ENST00000503180 PROM2Q8N271 834 aa20.98■□□□□ 0.95
DDR1-248ENST00000503180 SLC27A3Q5K4L6 730 aa20.96■□□□□ 0.95
DDR1-248ENST00000503180 DOT1LQ8TEK3 1739 aa20.95■□□□□ 0.94
DDR1-248ENST00000503180 NFATC2IPQ8NCF5 419 aa20.95■□□□□ 0.94
DDR1-248ENST00000503180 LGR6Q9HBX8 967 aa20.95■□□□□ 0.94
DDR1-248ENST00000503180 MAPK8IP3Q9UPT6 1336 aa20.95■□□□□ 0.94
DDR1-248ENST00000503180 RNMTO43148 476 aaKnown RBP20.94■□□□□ 0.94
DDR1-248ENST00000503180 RTF1Q92541 710 aaKnown RBP20.94■□□□□ 0.94
DDR1-248ENST00000503180 BTAF1O14981 1849 aa20.94■□□□□ 0.94
DDR1-248ENST00000503180 HTATSF1O43719 755 aaKnown RBP20.92■□□□□ 0.94
DDR1-248ENST00000503180 PLEKHF1Q96S99 279 aa20.92■□□□□ 0.94
DDR1-248ENST00000503180 MAP3K5Q99683 1374 aa20.92■□□□□ 0.94
DDR1-248ENST00000503180 RGPD3A6NKT7 1758 aaPredicted RBP20.92■□□□□ 0.94
DDR1-248ENST00000503180 RGPD4Q7Z3J3 1758 aa20.92■□□□□ 0.94
DDR1-248ENST00000503180 KDM6AO15550 1401 aaPredicted RBP20.91■□□□□ 0.94
DDR1-248ENST00000503180 TEFQ10587 303 aa20.91■□□□□ 0.94
DDR1-248ENST00000503180 SLC52A2Q9HAB3 445 aa20.91■□□□□ 0.94
DDR1-248ENST00000503180 CCNL1Q9UK58 526 aaPredicted RBP20.91■□□□□ 0.94
DDR1-248ENST00000503180 ASAP1Q9ULH1 1129 aa20.91■□□□□ 0.94
DDR1-248ENST00000503180 ADAMTS8Q9UP79 889 aa20.91■□□□□ 0.94
DDR1-248ENST00000503180 PALLDQ8WX93 1383 aa20.9■□□□□ 0.94
DDR1-248ENST00000503180 ATG3Q9NT62 314 aa20.9■□□□□ 0.94
DDR1-248ENST00000503180 IL17REQ8NFR9 667 aa20.89■□□□□ 0.93
DDR1-248ENST00000503180 STK32BQ9NY57 414 aa20.89■□□□□ 0.93
DDR1-248ENST00000503180 ITGB4P16144 1822 aa20.89■□□□□ 0.93
DDR1-248ENST00000503180 R3HDM1Q15032 1099 aaKnown RBP20.88■□□□□ 0.93
DDR1-248ENST00000503180 NFE2L2Q16236 605 aa20.88■□□□□ 0.93
DDR1-248ENST00000503180 RUNDC1Q96C34 613 aa20.88■□□□□ 0.93
DDR1-248ENST00000503180 MRS2Q9HD23 443 aa20.88■□□□□ 0.93
DDR1-248ENST00000503180 LRRC4BQ9NT99 713 aa20.88■□□□□ 0.93
DDR1-248ENST00000503180 TOGARAM1Q9Y4F4 1720 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms