RNA–Protein interactions for RNA: ENST00000503123.5

RNF4-203, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-203ENST00000503123 CAMKK2Q96RR4 588 aa12□□□□□ -0.49
RNF4-203ENST00000503123 BCL11BQ9C0K0 894 aaPredicted RBP12□□□□□ -0.49
RNF4-203ENST00000503123 PLSCR1O15162 318 aa11.99□□□□□ -0.49
RNF4-203ENST00000503123 APBA3O96018 575 aa11.99□□□□□ -0.49
RNF4-203ENST00000503123 EN1Q05925 392 aaPredicted RBP11.99□□□□□ -0.49
RNF4-203ENST00000503123 QSER1Q2KHR3 1735 aa11.98□□□□□ -0.49
RNF4-203ENST00000503123 TOGARAM1Q9Y4F4 1720 aa11.98□□□□□ -0.49
RNF4-203ENST00000503123 PPM1GO15355 546 aaPredicted RBP11.98□□□□□ -0.49
RNF4-203ENST00000503123 RAPGEF4Q8WZA2 1011 aa11.98□□□□□ -0.49
RNF4-203ENST00000503123 LRP5O75197 1615 aa11.97□□□□□ -0.49
RNF4-203ENST00000503123 TNNT2P45379 298 aaPredicted RBP11.97□□□□□ -0.49
RNF4-203ENST00000503123 ZCRB1Q8TBF4 217 aaKnown RBP11.97□□□□□ -0.49
RNF4-203ENST00000503123 TAF1LQ8IZX4 1826 aa11.97□□□□□ -0.49
RNF4-203ENST00000503123 SRCAPQ6ZRS2 3230 aa11.96□□□□□ -0.49
RNF4-203ENST00000503123 TATP17735 454 aaPredicted RBP11.96□□□□□ -0.49
RNF4-203ENST00000503123 EZH2Q15910 746 aaKnown RBP11.96□□□□□ -0.49
RNF4-203ENST00000503123 SCN11AQ9UI33 1791 aa11.95□□□□□ -0.5
RNF4-203ENST00000503123 IGSF1Q8N6C5 1336 aa11.95□□□□□ -0.5
RNF4-203ENST00000503123 PCDH11XQ9BZA7 1347 aa11.95□□□□□ -0.5
RNF4-203ENST00000503123 PCDH11YQ9BZA8 1340 aa11.95□□□□□ -0.5
RNF4-203ENST00000503123 EIF4A2Q14240 407 aaKnown RBP11.95□□□□□ -0.5
RNF4-203ENST00000503123 USHBP1Q8N6Y0 703 aa11.95□□□□□ -0.5
RNF4-203ENST00000503123 EYA1Q99502 592 aa11.95□□□□□ -0.5
RNF4-203ENST00000503123 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.95□□□□□ -0.5
RNF4-203ENST00000503123 PAPPAQ13219 1627 aa11.94□□□□□ -0.5
RNF4-203ENST00000503123 TUBGCP6Q96RT7 1819 aa11.93□□□□□ -0.5
RNF4-203ENST00000503123 CASZ1Q86V15 1759 aa11.93□□□□□ -0.5
RNF4-203ENST00000503123 DDX54Q8TDD1 881 aaKnown RBP11.93□□□□□ -0.5
RNF4-203ENST00000503123 KDRP35968 1356 aa11.92□□□□□ -0.5
RNF4-203ENST00000503123 C5P01031 1676 aa11.92□□□□□ -0.5
RNF4-203ENST00000503123 KCNQ2O43526 872 aa11.92□□□□□ -0.5
RNF4-203ENST00000503123 PTF1AQ7RTS3 328 aa11.92□□□□□ -0.5
RNF4-203ENST00000503123 COL3A1P02461 1466 aaPredicted RBP11.91□□□□□ -0.5
RNF4-203ENST00000503123 CC2D1BQ5T0F9 858 aaKnown RBP11.91□□□□□ -0.5
RNF4-203ENST00000503123 ACSBG1Q96GR2 724 aa11.91□□□□□ -0.5
RNF4-203ENST00000503123 SPG7Q9UQ90 795 aa11.91□□□□□ -0.5
RNF4-203ENST00000503123 ZNF831Q5JPB2 1677 aa11.91□□□□□ -0.5
RNF4-203ENST00000503123 CYP27B1O15528 508 aa11.9□□□□□ -0.5
RNF4-203ENST00000503123 MTHFSP49914 203 aa11.9□□□□□ -0.5
RNF4-203ENST00000503123 NKX1-1Q15270 411 aaPredicted RBP11.9□□□□□ -0.5
RNF4-203ENST00000503123 NBPF14Q5TI25 921 aa11.9□□□□□ -0.5
RNF4-203ENST00000503123 IL13P35225 146 aa11.89□□□□□ -0.51
RNF4-203ENST00000503123 ZEB1P37275 1124 aaPredicted RBP11.89□□□□□ -0.51
RNF4-203ENST00000503123 PROM2Q8N271 834 aa11.89□□□□□ -0.51
RNF4-203ENST00000503123 ADAMTS7Q9UKP4 1686 aa11.88□□□□□ -0.51
RNF4-203ENST00000503123 PRIM1P49642 420 aaKnown RBP11.88□□□□□ -0.51
RNF4-203ENST00000503123 TXNRD1Q16881 649 aa11.88□□□□□ -0.51
RNF4-203ENST00000503123 COL24A1Q17RW2 1714 aa11.88□□□□□ -0.51
RNF4-203ENST00000503123 R3HDM1Q15032 1099 aaKnown RBP11.87□□□□□ -0.51
RNF4-203ENST00000503123 AMOTQ4VCS5 1084 aa11.87□□□□□ -0.51
RNF4-203ENST00000503123 SLC27A3Q5K4L6 730 aa11.87□□□□□ -0.51
RNF4-203ENST00000503123 IFNL2Q8IZJ0 200 aa11.87□□□□□ -0.51
RNF4-203ENST00000503123 UBR3Q6ZT12 1888 aa11.87□□□□□ -0.51
RNF4-203ENST00000503123 DLG5Q8TDM6 1919 aa11.86□□□□□ -0.51
RNF4-203ENST00000503123 PSDA5PKW4 1024 aaPredicted RBP11.86□□□□□ -0.51
RNF4-203ENST00000503123 DIAPH1O60610 1272 aaKnown RBP11.86□□□□□ -0.51
RNF4-203ENST00000503123 HMGB2P26583 209 aaKnown RBP11.86□□□□□ -0.51
RNF4-203ENST00000503123 SYTL4Q96C24 671 aaPredicted RBP11.86□□□□□ -0.51
RNF4-203ENST00000503123 CICQ96RK0 1608 aaPredicted RBP11.86□□□□□ -0.51
RNF4-203ENST00000503123 SIPA1L3O60292 1781 aaPredicted RBP11.85□□□□□ -0.51
RNF4-203ENST00000503123 HSP90AB1P08238 724 aaKnown RBP11.85□□□□□ -0.51
RNF4-203ENST00000503123 PHKG2P15735 406 aa11.85□□□□□ -0.51
RNF4-203ENST00000503123 PLEKHO1Q53GL0 409 aaPredicted RBP11.85□□□□□ -0.51
RNF4-203ENST00000503123 SULT6B1Q6IMI4 303 aa11.85□□□□□ -0.51
RNF4-203ENST00000503123 COL5A3P25940 1745 aaPredicted RBP11.85□□□□□ -0.51
RNF4-203ENST00000503123 AEBP1Q8IUX7 1158 aa11.84□□□□□ -0.51
RNF4-203ENST00000503123 ANO8Q9HCE9 1232 aaPredicted RBP11.84□□□□□ -0.51
RNF4-203ENST00000503123 C4BP0C0L5 1744 aa11.83□□□□□ -0.52
RNF4-203ENST00000503123 SMARCC1Q92922 1105 aaPredicted RBP11.83□□□□□ -0.52
RNF4-203ENST00000503123 DCAF5Q96JK2 942 aa11.83□□□□□ -0.52
RNF4-203ENST00000503123 CFAP53Q96M91 514 aa11.83□□□□□ -0.52
RNF4-203ENST00000503123 STK32BQ9NY57 414 aa11.83□□□□□ -0.52
RNF4-203ENST00000503123 UBR2Q8IWV8 1755 aa11.82□□□□□ -0.52
RNF4-203ENST00000503123 MYH14Q7Z406 1995 aaKnown RBP11.82□□□□□ -0.52
RNF4-203ENST00000503123 ERVV-2B6SEH9 535 aa11.82□□□□□ -0.52
RNF4-203ENST00000503123 PPP2R1AP30153 589 aa11.82□□□□□ -0.52
RNF4-203ENST00000503123 SLC15A2Q16348 729 aa11.82□□□□□ -0.52
RNF4-203ENST00000503123 ZNF530Q6P9A1 599 aaPredicted RBP11.82□□□□□ -0.52
RNF4-203ENST00000503123 LRRC4BQ9NT99 713 aa11.82□□□□□ -0.52
RNF4-203ENST00000503123 KDM6AO15550 1401 aaPredicted RBP11.82□□□□□ -0.52
RNF4-203ENST00000503123 MRC1P22897 1456 aa11.82□□□□□ -0.52
RNF4-203ENST00000503123 PALLDQ8WX93 1383 aa11.81□□□□□ -0.52
RNF4-203ENST00000503123 C1orf141Q5JVX7 400 aa11.81□□□□□ -0.52
RNF4-203ENST00000503123 MPRIPQ6WCQ1 1025 aa11.81□□□□□ -0.52
RNF4-203ENST00000503123 TMOD3Q9NYL9 352 aa11.81□□□□□ -0.52
RNF4-203ENST00000503123 PIGBQ92521 554 aa11.8□□□□□ -0.52
RNF4-203ENST00000503123 CCNL1Q9UK58 526 aaPredicted RBP11.8□□□□□ -0.52
RNF4-203ENST00000503123 HMOX1P09601 288 aa11.79□□□□□ -0.52
RNF4-203ENST00000503123 CNGB1Q14028 1251 aaPredicted RBP11.79□□□□□ -0.52
RNF4-203ENST00000503123 AKAP4Q5JQC9 854 aa11.79□□□□□ -0.52
RNF4-203ENST00000503123 AKT1S1Q96B36 256 aa11.79□□□□□ -0.52
RNF4-203ENST00000503123 NUDCQ9Y266 331 aa11.79□□□□□ -0.52
RNF4-203ENST00000503123 TJP1Q07157 1748 aa11.78□□□□□ -0.52
RNF4-203ENST00000503123 RALBP1Q15311 655 aa11.78□□□□□ -0.52
RNF4-203ENST00000503123 SPON1Q9HCB6 807 aa11.78□□□□□ -0.52
RNF4-203ENST00000503123 U2SURPO15042 1029 aaKnown RBP11.77□□□□□ -0.53
RNF4-203ENST00000503123 DDX10Q13206 875 aaKnown RBP11.77□□□□□ -0.53
RNF4-203ENST00000503123 ZNF827Q17R98 1081 aa11.77□□□□□ -0.53
RNF4-203ENST00000503123 C4AP0C0L4 1744 aa11.76□□□□□ -0.53
RNF4-203ENST00000503123 LOC102724428A0A0B4J2F2 783 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms