RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 A0A0G2JLW4 131 aa7.3□□□□□ -1.24
HTT-202ENST00000502820 DIEXFQ68CQ4 756 aaKnown RBP7.3□□□□□ -1.24
HTT-202ENST00000502820 ANKRD24Q8TF21 1146 aa7.3□□□□□ -1.24
HTT-202ENST00000502820 LMO7Q8WWI1 1683 aa7.3□□□□□ -1.24
HTT-202ENST00000502820 KDM2BQ8NHM5 1336 aa7.29□□□□□ -1.24
HTT-202ENST00000502820 CPSF1Q10570 1443 aaKnown RBP7.29□□□□□ -1.24
HTT-202ENST00000502820 CCDC85CA6NKD9 419 aa7.29□□□□□ -1.24
HTT-202ENST00000502820 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.29□□□□□ -1.24
HTT-202ENST00000502820 SMC1BQ8NDV3 1235 aa7.29□□□□□ -1.24
HTT-202ENST00000502820 MKRN1Q9UHC7 482 aaKnown RBP7.29□□□□□ -1.24
HTT-202ENST00000502820 USP47Q96K76 1375 aa7.29□□□□□ -1.24
HTT-202ENST00000502820 FLAD1Q8NFF5 587 aa7.28□□□□□ -1.24
HTT-202ENST00000502820 AIDAQ96BJ3 306 aa7.28□□□□□ -1.24
HTT-202ENST00000502820 RNF181Q9P0P0 153 aa7.28□□□□□ -1.24
HTT-202ENST00000502820 SBF2Q86WG5 1849 aa7.27□□□□□ -1.25
HTT-202ENST00000502820 MPRIPQ6WCQ1 1025 aa7.27□□□□□ -1.25
HTT-202ENST00000502820 ADGRB1O14514 1584 aa7.26□□□□□ -1.25
HTT-202ENST00000502820 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.26□□□□□ -1.25
HTT-202ENST00000502820 FOXN1O15353 648 aa7.26□□□□□ -1.25
HTT-202ENST00000502820 MLLT1Q03111 559 aaPredicted RBP7.26□□□□□ -1.25
HTT-202ENST00000502820 TTC21BQ7Z4L5 1316 aa7.26□□□□□ -1.25
HTT-202ENST00000502820 MMP10P09238 476 aa7.25□□□□□ -1.25
HTT-202ENST00000502820 DPEP1P16444 411 aa7.25□□□□□ -1.25
HTT-202ENST00000502820 STAC3Q96MF2 364 aa7.25□□□□□ -1.25
HTT-202ENST00000502820 PAPPAQ13219 1627 aa7.25□□□□□ -1.25
HTT-202ENST00000502820 KCPQ6ZWJ8 1503 aa7.25□□□□□ -1.25
HTT-202ENST00000502820 AKAP12Q02952 1782 aa7.25□□□□□ -1.25
HTT-202ENST00000502820 ERBB3P21860 1342 aa7.25□□□□□ -1.25
HTT-202ENST00000502820 ANKRD36BQ8N2N9 1353 aa7.24□□□□□ -1.25
HTT-202ENST00000502820 LBX1P52954 281 aa7.24□□□□□ -1.25
HTT-202ENST00000502820 AMIGO3Q86WK7 504 aa7.24□□□□□ -1.25
HTT-202ENST00000502820 ZCRB1Q8TBF4 217 aaKnown RBP7.24□□□□□ -1.25
HTT-202ENST00000502820 NHSQ6T4R5 1651 aa7.24□□□□□ -1.25
HTT-202ENST00000502820 GNPATO15228 680 aa7.23□□□□□ -1.25
HTT-202ENST00000502820 ABHD8Q96I13 439 aa7.23□□□□□ -1.25
HTT-202ENST00000502820 WDR90Q96KV7 1748 aa7.23□□□□□ -1.25
HTT-202ENST00000502820 CENPJQ9HC77 1338 aaPredicted RBP7.23□□□□□ -1.25
HTT-202ENST00000502820 CTCFP49711 727 aaPredicted RBP7.22□□□□□ -1.25
HTT-202ENST00000502820 TGFB2P61812 414 aa7.22□□□□□ -1.25
HTT-202ENST00000502820 NBPF1Q3BBV0 1214 aa7.22□□□□□ -1.25
HTT-202ENST00000502820 NME9Q86XW9 330 aa7.22□□□□□ -1.25
HTT-202ENST00000502820 USHBP1Q8N6Y0 703 aa7.22□□□□□ -1.25
HTT-202ENST00000502820 CCER1Q8TC90 406 aaPredicted RBP7.22□□□□□ -1.25
HTT-202ENST00000502820 TMC1Q8TDI8 760 aa7.22□□□□□ -1.25
HTT-202ENST00000502820 ZNF692Q9BU19 519 aaPredicted RBP7.22□□□□□ -1.25
HTT-202ENST00000502820 CCDC87Q9NVE4 849 aa7.22□□□□□ -1.25
HTT-202ENST00000502820 BTAF1O14981 1849 aa7.22□□□□□ -1.25
HTT-202ENST00000502820 PALLDQ8WX93 1383 aa7.21□□□□□ -1.25
HTT-202ENST00000502820 ITSN1Q15811 1721 aa7.21□□□□□ -1.25
HTT-202ENST00000502820 ZNF316A6NFI3 1004 aaPredicted RBP7.21□□□□□ -1.26
HTT-202ENST00000502820 VEGFAP15692 232 aaPredicted RBP7.21□□□□□ -1.26
HTT-202ENST00000502820 GRM1Q13255 1194 aa7.21□□□□□ -1.26
HTT-202ENST00000502820 DALRD3Q5D0E6 543 aaKnown RBP7.21□□□□□ -1.26
HTT-202ENST00000502820 PIM2Q9P1W9 311 aa7.21□□□□□ -1.26
HTT-202ENST00000502820 PARP3Q9Y6F1 533 aa7.21□□□□□ -1.26
HTT-202ENST00000502820 SLIT3O75094 1523 aa7.21□□□□□ -1.26
HTT-202ENST00000502820 ABCC6O95255 1503 aa7.21□□□□□ -1.26
HTT-202ENST00000502820 PCNTO95613 3336 aa7.21□□□□□ -1.26
HTT-202ENST00000502820 KTN1Q86UP2 1357 aaKnown RBP7.2□□□□□ -1.26
HTT-202ENST00000502820 PLEKHG2Q9H7P9 1386 aa7.2□□□□□ -1.26
HTT-202ENST00000502820 AMPHP49418 695 aa7.2□□□□□ -1.26
HTT-202ENST00000502820 RASSF7Q02833 373 aa7.2□□□□□ -1.26
HTT-202ENST00000502820 PRDM10Q9NQV6 1147 aa7.2□□□□□ -1.26
HTT-202ENST00000502820 EVC2Q86UK5 1308 aa7.2□□□□□ -1.26
HTT-202ENST00000502820 TTC21AQ8NDW8 1320 aa7.2□□□□□ -1.26
HTT-202ENST00000502820 NSD2O96028 1365 aa7.2□□□□□ -1.26
HTT-202ENST00000502820 HMGB2P26583 209 aaKnown RBP7.19□□□□□ -1.26
HTT-202ENST00000502820 CHRNA5P30532 468 aa7.19□□□□□ -1.26
HTT-202ENST00000502820 ATP6V1AP38606 617 aa7.19□□□□□ -1.26
HTT-202ENST00000502820 TMF1P82094 1093 aa7.19□□□□□ -1.26
HTT-202ENST00000502820 PAXIP1Q6ZW49 1069 aaPredicted RBP7.19□□□□□ -1.26
HTT-202ENST00000502820 RAPGEF4Q8WZA2 1011 aa7.19□□□□□ -1.26
HTT-202ENST00000502820 ANP32EQ9BTT0 268 aa7.19□□□□□ -1.26
HTT-202ENST00000502820 ARHGEF28Q8N1W1 1705 aaKnown RBP7.18□□□□□ -1.26
HTT-202ENST00000502820 PXDNLA1KZ92 1463 aa7.18□□□□□ -1.26
HTT-202ENST00000502820 FBLN1P23142 703 aa7.18□□□□□ -1.26
HTT-202ENST00000502820 SSFA2P28290 1259 aa7.18□□□□□ -1.26
HTT-202ENST00000502820 RFC4P35249 363 aa7.18□□□□□ -1.26
HTT-202ENST00000502820 TRAPPC3LQ5T215 181 aa7.18□□□□□ -1.26
HTT-202ENST00000502820 ERICH6Q7L0X2 663 aa7.18□□□□□ -1.26
HTT-202ENST00000502820 LINC00116Q8NCU8 138 aa7.18□□□□□ -1.26
HTT-202ENST00000502820 SMARCC1Q92922 1105 aaPredicted RBP7.18□□□□□ -1.26
HTT-202ENST00000502820 ZNF219Q9P2Y4 722 aaPredicted RBP7.18□□□□□ -1.26
HTT-202ENST00000502820 KAT6BQ8WYB5 2073 aa7.18□□□□□ -1.26
HTT-202ENST00000502820 TRPM1Q7Z4N2 1603 aa7.17□□□□□ -1.26
HTT-202ENST00000502820 TATP17735 454 aaPredicted RBP7.17□□□□□ -1.26
HTT-202ENST00000502820 VEGFBP49765 207 aa7.17□□□□□ -1.26
HTT-202ENST00000502820 DPY19L2Q6NUT2 758 aa7.17□□□□□ -1.26
HTT-202ENST00000502820 NLGN1Q8N2Q7 840 aa7.17□□□□□ -1.26
HTT-202ENST00000502820 IP6K1Q92551 441 aa7.17□□□□□ -1.26
HTT-202ENST00000502820 CREBZFQ9NS37 354 aa7.17□□□□□ -1.26
HTT-202ENST00000502820 RTCBQ9Y3I0 505 aaKnown RBP7.17□□□□□ -1.26
HTT-202ENST00000502820 COL18A1P39060 1754 aa7.16□□□□□ -1.26
HTT-202ENST00000502820 LOC102724428A0A0B4J2F2 783 aa7.16□□□□□ -1.26
HTT-202ENST00000502820 GLTPD2A6NH11 291 aa7.16□□□□□ -1.26
HTT-202ENST00000502820 SIK1P57059 783 aa7.16□□□□□ -1.26
HTT-202ENST00000502820 HDGFL2Q7Z4V5 671 aaPredicted RBP7.16□□□□□ -1.26
HTT-202ENST00000502820 RBM42Q9BTD8 480 aaKnown RBP7.16□□□□□ -1.26
HTT-202ENST00000502820 BEGAINQ9BUH8 593 aa7.16□□□□□ -1.26
HTT-202ENST00000502820 TSKSQ9UJT2 592 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms