RNA–Protein interactions for RNA: ENST00000502557.5

CCHCR1-216, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 662 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-216ENST00000502557 SULT6B1Q6IMI4 303 aa23.97■■□□□ 1.43
CCHCR1-216ENST00000502557 KDRP35968 1356 aa23.95■■□□□ 1.42
CCHCR1-216ENST00000502557 DDX54Q8TDD1 881 aaKnown RBP23.95■■□□□ 1.42
CCHCR1-216ENST00000502557 U2SURPO15042 1029 aaKnown RBP23.94■■□□□ 1.42
CCHCR1-216ENST00000502557 RGPD1P0DJD0 1748 aa23.93■■□□□ 1.42
CCHCR1-216ENST00000502557 BCL9O00512 1426 aa23.93■■□□□ 1.42
CCHCR1-216ENST00000502557 HMOX1P09601 288 aa23.92■■□□□ 1.42
CCHCR1-216ENST00000502557 NUDCQ9Y266 331 aa23.92■■□□□ 1.42
CCHCR1-216ENST00000502557 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.91■■□□□ 1.42
CCHCR1-216ENST00000502557 SPG7Q9UQ90 795 aa23.91■■□□□ 1.42
CCHCR1-216ENST00000502557 PLEKHG2Q9H7P9 1386 aa23.91■■□□□ 1.42
CCHCR1-216ENST00000502557 PCDH11XQ9BZA7 1347 aa23.9■■□□□ 1.42
CCHCR1-216ENST00000502557 PCDH11YQ9BZA8 1340 aa23.9■■□□□ 1.42
CCHCR1-216ENST00000502557 CCDC125Q86Z20 511 aa23.9■■□□□ 1.42
CCHCR1-216ENST00000502557 CYP27B1O15528 508 aa23.89■■□□□ 1.41
CCHCR1-216ENST00000502557 TRIM37O94972 964 aa23.89■■□□□ 1.41
CCHCR1-216ENST00000502557 PLEKHO1Q53GL0 409 aaPredicted RBP23.87■■□□□ 1.41
CCHCR1-216ENST00000502557 ANP32CO43423 234 aa23.86■■□□□ 1.41
CCHCR1-216ENST00000502557 U2AF1L5P0DN76 240 aaPredicted RBP23.86■■□□□ 1.41
CCHCR1-216ENST00000502557 U2AF1Q01081 240 aaKnown RBP eCLIP23.86■■□□□ 1.41
CCHCR1-216ENST00000502557 AMOTQ4VCS5 1084 aa23.86■■□□□ 1.41
CCHCR1-216ENST00000502557 SF3B2Q13435 895 aaKnown RBP23.84■■□□□ 1.41
CCHCR1-216ENST00000502557 PTF1AQ7RTS3 328 aa23.84■■□□□ 1.41
CCHCR1-216ENST00000502557 ACSBG1Q96GR2 724 aa23.84■■□□□ 1.41
CCHCR1-216ENST00000502557 RSPH6AQ9H0K4 717 aa23.84■■□□□ 1.41
CCHCR1-216ENST00000502557 PHKG2P15735 406 aa23.83■■□□□ 1.41
CCHCR1-216ENST00000502557 BCL11BQ9C0K0 894 aaPredicted RBP23.83■■□□□ 1.41
CCHCR1-216ENST00000502557 PKD1L3Q7Z443 1732 aa23.82■■□□□ 1.4
CCHCR1-216ENST00000502557 KCNQ2O43526 872 aa23.82■■□□□ 1.4
CCHCR1-216ENST00000502557 NKX1-1Q15270 411 aaPredicted RBP23.82■■□□□ 1.4
CCHCR1-216ENST00000502557 ZNF530Q6P9A1 599 aaPredicted RBP23.82■■□□□ 1.4
CCHCR1-216ENST00000502557 IFNL2Q8IZJ0 200 aa23.82■■□□□ 1.4
CCHCR1-216ENST00000502557 SHANK3Q9BYB0 1731 aa23.81■■□□□ 1.4
CCHCR1-216ENST00000502557 FCHSD2O94868 740 aa23.8■■□□□ 1.4
CCHCR1-216ENST00000502557 PRKAR2BP31323 418 aa23.8■■□□□ 1.4
CCHCR1-216ENST00000502557 APBA3O96018 575 aa23.79■■□□□ 1.4
CCHCR1-216ENST00000502557 DEFB132Q7Z7B7 95 aa23.79■■□□□ 1.4
CCHCR1-216ENST00000502557 BAG6P46379 1132 aa23.78■■□□□ 1.4
CCHCR1-216ENST00000502557 PRIM1P49642 420 aaKnown RBP23.78■■□□□ 1.4
CCHCR1-216ENST00000502557 MTHFSDQ2M296 383 aaKnown RBP23.78■■□□□ 1.4
CCHCR1-216ENST00000502557 PHACTR3Q96KR7 559 aa23.77■■□□□ 1.4
CCHCR1-216ENST00000502557 CCDC184Q52MB2 194 aa23.76■■□□□ 1.39
CCHCR1-216ENST00000502557 C1orf141Q5JVX7 400 aa23.76■■□□□ 1.39
CCHCR1-216ENST00000502557 EN1Q05925 392 aaPredicted RBP23.75■■□□□ 1.39
CCHCR1-216ENST00000502557 SYTL4Q96C24 671 aaPredicted RBP23.75■■□□□ 1.39
CCHCR1-216ENST00000502557 HSP90AB1P08238 724 aaKnown RBP23.74■■□□□ 1.39
CCHCR1-216ENST00000502557 AKAP4Q5JQC9 854 aa23.74■■□□□ 1.39
CCHCR1-216ENST00000502557 EP400Q96L91 3159 aa23.73■■□□□ 1.39
CCHCR1-216ENST00000502557 DCAF5Q96JK2 942 aa23.73■■□□□ 1.39
CCHCR1-216ENST00000502557 TNS1Q9HBL0 1735 aaKnown RBP23.73■■□□□ 1.39
CCHCR1-216ENST00000502557 GAS2L2Q8NHY3 880 aa23.72■■□□□ 1.39
CCHCR1-216ENST00000502557 CAMKK2Q96RR4 588 aa23.72■■□□□ 1.39
CCHCR1-216ENST00000502557 PLEKHF1Q96S99 279 aa23.72■■□□□ 1.39
CCHCR1-216ENST00000502557 KDM6AO15550 1401 aaPredicted RBP23.72■■□□□ 1.39
CCHCR1-216ENST00000502557 NHSQ6T4R5 1651 aa23.71■■□□□ 1.39
CCHCR1-216ENST00000502557 WDR43Q15061 677 aaKnown RBP eCLIP23.71■■□□□ 1.39
CCHCR1-216ENST00000502557 MPRIPQ6WCQ1 1025 aa23.71■■□□□ 1.39
CCHCR1-216ENST00000502557 PLSCR1O15162 318 aa23.7■■□□□ 1.38
CCHCR1-216ENST00000502557 EZH2Q15910 746 aaKnown RBP23.7■■□□□ 1.38
CCHCR1-216ENST00000502557 PNNQ9H307 717 aaKnown RBP23.69■■□□□ 1.38
CCHCR1-216ENST00000502557 ADAMTS8Q9UP79 889 aa23.69■■□□□ 1.38
CCHCR1-216ENST00000502557 ERVV-2B6SEH9 535 aa23.68■■□□□ 1.38
CCHCR1-216ENST00000502557 PIGBQ92521 554 aa23.68■■□□□ 1.38
CCHCR1-216ENST00000502557 SBF2Q86WG5 1849 aa23.68■■□□□ 1.38
CCHCR1-216ENST00000502557 DOT1LQ8TEK3 1739 aa23.67■■□□□ 1.38
CCHCR1-216ENST00000502557 LGR6Q9HBX8 967 aa23.67■■□□□ 1.38
CCHCR1-216ENST00000502557 MRS2Q9HD23 443 aa23.67■■□□□ 1.38
CCHCR1-216ENST00000502557 MAP3K5Q99683 1374 aa23.66■■□□□ 1.38
CCHCR1-216ENST00000502557 RNMTO43148 476 aaKnown RBP23.66■■□□□ 1.38
CCHCR1-216ENST00000502557 TMOD3Q9NYL9 352 aa23.66■■□□□ 1.38
CCHCR1-216ENST00000502557 TOGARAM1Q9Y4F4 1720 aa23.65■■□□□ 1.38
CCHCR1-216ENST00000502557 GNAT3A8MTJ3 354 aa23.65■■□□□ 1.38
CCHCR1-216ENST00000502557 NEFMP07197 916 aa23.65■■□□□ 1.38
CCHCR1-216ENST00000502557 CABP4P57796 275 aa23.64■■□□□ 1.37
CCHCR1-216ENST00000502557 PROM2Q8N271 834 aa23.64■■□□□ 1.37
CCHCR1-216ENST00000502557 MAPK8IP3Q9UPT6 1336 aa23.63■■□□□ 1.37
CCHCR1-216ENST00000502557 DIEXFQ68CQ4 756 aaKnown RBP23.63■■□□□ 1.37
CCHCR1-216ENST00000502557 CCDC146Q8IYE0 955 aa23.63■■□□□ 1.37
CCHCR1-216ENST00000502557 NFE2L2Q16236 605 aa23.62■■□□□ 1.37
CCHCR1-216ENST00000502557 TXNRD1Q16881 649 aa23.62■■□□□ 1.37
CCHCR1-216ENST00000502557 IL17REQ8NFR9 667 aa23.62■■□□□ 1.37
CCHCR1-216ENST00000502557 PNISRQ8TF01 805 aaKnown RBP23.62■■□□□ 1.37
CCHCR1-216ENST00000502557 RUNDC1Q96C34 613 aa23.61■■□□□ 1.37
CCHCR1-216ENST00000502557 NFATC2IPQ8NCF5 419 aa23.6■■□□□ 1.37
CCHCR1-216ENST00000502557 SLC52A2Q9HAB3 445 aa23.6■■□□□ 1.37
CCHCR1-216ENST00000502557 ASAP1Q9ULH1 1129 aa23.59■■□□□ 1.37
CCHCR1-216ENST00000502557 PALLDQ8WX93 1383 aa23.59■■□□□ 1.37
CCHCR1-216ENST00000502557 BTAF1O14981 1849 aa23.59■■□□□ 1.37
CCHCR1-216ENST00000502557 HTATSF1O43719 755 aaKnown RBP23.58■■□□□ 1.37
CCHCR1-216ENST00000502557 SMARCC1Q92922 1105 aaPredicted RBP23.58■■□□□ 1.37
CCHCR1-216ENST00000502557 ATG3Q9NT62 314 aa23.58■■□□□ 1.37
CCHCR1-216ENST00000502557 MRC1P22897 1456 aa23.57■■□□□ 1.36
CCHCR1-216ENST00000502557 CEMIPQ8WUJ3 1361 aa23.57■■□□□ 1.36
CCHCR1-216ENST00000502557 RTF1Q92541 710 aaKnown RBP23.57■■□□□ 1.36
CCHCR1-216ENST00000502557 TMPOP42166 694 aaKnown RBP23.56■■□□□ 1.36
CCHCR1-216ENST00000502557 MCM10Q7L590 875 aa23.56■■□□□ 1.36
CCHCR1-216ENST00000502557 LRRC4BQ9NT99 713 aa23.56■■□□□ 1.36
CCHCR1-216ENST00000502557 ADAMTS7Q9UKP4 1686 aa23.56■■□□□ 1.36
CCHCR1-216ENST00000502557 DCTN1Q14203 1278 aa23.55■■□□□ 1.36
CCHCR1-216ENST00000502557 RGPD3A6NKT7 1758 aaPredicted RBP23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms