RNA–Protein interactions for RNA: ENST00000502367.1

NFKB1-203, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 456 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-203ENST00000502367 PEG3Q9GZU2 1588 aa10.14□□□□□ -0.79
NFKB1-203ENST00000502367 SPINT1O43278 529 aa10.13□□□□□ -0.79
NFKB1-203ENST00000502367 STAU1O95793 577 aaKnown RBP10.13□□□□□ -0.79
NFKB1-203ENST00000502367 FLIIQ13045 1269 aa10.13□□□□□ -0.79
NFKB1-203ENST00000502367 PIK3CDO00329 1044 aa10.12□□□□□ -0.79
NFKB1-203ENST00000502367 PTGIRP43119 386 aa10.12□□□□□ -0.79
NFKB1-203ENST00000502367 LCE2AQ5TA79 106 aaPredicted RBP10.12□□□□□ -0.79
NFKB1-203ENST00000502367 TTLL8A6PVC2 850 aa10.11□□□□□ -0.79
NFKB1-203ENST00000502367 TERTO14746 1132 aaKnown RBP10.11□□□□□ -0.79
NFKB1-203ENST00000502367 ERVK-9P63128 1117 aa10.11□□□□□ -0.79
NFKB1-203ENST00000502367 RNF20Q5VTR2 975 aa10.11□□□□□ -0.79
NFKB1-203ENST00000502367 TREML4Q6UXN2 200 aa10.11□□□□□ -0.79
NFKB1-203ENST00000502367 OSBPL3Q9H4L5 887 aa10.11□□□□□ -0.79
NFKB1-203ENST00000502367 POLMQ9NP87 494 aaPredicted RBP10.11□□□□□ -0.79
NFKB1-203ENST00000502367 RAD21O60216 631 aa10.1□□□□□ -0.79
NFKB1-203ENST00000502367 MCCD1P59942 119 aaPredicted RBP10.1□□□□□ -0.79
NFKB1-203ENST00000502367 SEMA3FQ13275 785 aa10.1□□□□□ -0.79
NFKB1-203ENST00000502367 WASHC4Q2M389 1173 aa10.1□□□□□ -0.79
NFKB1-203ENST00000502367 CC2D2BQ6DHV5 1058 aa10.1□□□□□ -0.79
NFKB1-203ENST00000502367 ADAMTS19Q8TE59 1207 aa10.1□□□□□ -0.79
NFKB1-203ENST00000502367 RAB6BQ9NRW1 208 aa10.1□□□□□ -0.79
NFKB1-203ENST00000502367 WFS1O76024 890 aa10.09□□□□□ -0.79
NFKB1-203ENST00000502367 SLFNL1Q499Z3 407 aa10.09□□□□□ -0.79
NFKB1-203ENST00000502367 NXF1Q9UBU9 619 aaKnown RBP10.09□□□□□ -0.79
NFKB1-203ENST00000502367 SMARCA2P51531 1590 aa10.09□□□□□ -0.79
NFKB1-203ENST00000502367 A0A1W2PRU2 124 aa10.08□□□□□ -0.8
NFKB1-203ENST00000502367 ATP5J2-PTCD1G3V325 749 aa10.08□□□□□ -0.8
NFKB1-203ENST00000502367 FOXD4L5Q5VV16 416 aaPredicted RBP10.08□□□□□ -0.8
NFKB1-203ENST00000502367 RNF135Q8IUD6 432 aa10.08□□□□□ -0.8
NFKB1-203ENST00000502367 MEN1O00255 615 aa10.07□□□□□ -0.8
NFKB1-203ENST00000502367 OXLD1Q5BKU9 147 aa10.07□□□□□ -0.8
NFKB1-203ENST00000502367 ALG2Q9H553 416 aa10.07□□□□□ -0.8
NFKB1-203ENST00000502367 TRAK2O60296 914 aa10.06□□□□□ -0.8
NFKB1-203ENST00000502367 PRICKLE2Q7Z3G6 844 aa10.06□□□□□ -0.8
NFKB1-203ENST00000502367 RNF217Q8TC41 542 aa10.06□□□□□ -0.8
NFKB1-203ENST00000502367 ARHGEF10LQ9HCE6 1279 aa10.06□□□□□ -0.8
NFKB1-203ENST00000502367 ERBB4Q15303 1308 aa10.06□□□□□ -0.8
NFKB1-203ENST00000502367 DOLKQ9UPQ8 538 aa10.05□□□□□ -0.8
NFKB1-203ENST00000502367 RHOQP17081 205 aa10.04□□□□□ -0.8
NFKB1-203ENST00000502367 PTSQ03393 145 aa10.04□□□□□ -0.8
NFKB1-203ENST00000502367 PPFIA3O75145 1194 aa10.03□□□□□ -0.8
NFKB1-203ENST00000502367 HDGFL1Q5TGJ6 251 aa10.03□□□□□ -0.8
NFKB1-203ENST00000502367 FNBP4Q8N3X1 1017 aaPredicted RBP10.03□□□□□ -0.8
NFKB1-203ENST00000502367 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.02□□□□□ -0.81
NFKB1-203ENST00000502367 DEPDC4Q8N2C3 294 aa10.02□□□□□ -0.81
NFKB1-203ENST00000502367 PLPP7Q8NBV4 271 aa10.02□□□□□ -0.81
NFKB1-203ENST00000502367 ZNF592Q92610 1267 aa10.02□□□□□ -0.81
NFKB1-203ENST00000502367 CHIC2Q9UKJ5 165 aa10.02□□□□□ -0.81
NFKB1-203ENST00000502367 CCDC88BA6NC98 1476 aa10.02□□□□□ -0.81
NFKB1-203ENST00000502367 H3BM21 787 aa10.01□□□□□ -0.81
NFKB1-203ENST00000502367 ESF1Q9H501 851 aaKnown RBP10.01□□□□□ -0.81
NFKB1-203ENST00000502367 IL2RAP01589 272 aa10□□□□□ -0.81
NFKB1-203ENST00000502367 SKIP12755 728 aa10□□□□□ -0.81
NFKB1-203ENST00000502367 PROSER2Q86WR7 435 aaPredicted RBP10□□□□□ -0.81
NFKB1-203ENST00000502367 ATAD2BQ9ULI0 1458 aa9.99□□□□□ -0.81
NFKB1-203ENST00000502367 MYCP01106 439 aaPredicted RBP9.99□□□□□ -0.81
NFKB1-203ENST00000502367 CYP2U1Q7Z449 544 aa9.99□□□□□ -0.81
NFKB1-203ENST00000502367 UCN2Q96RP3 112 aa9.99□□□□□ -0.81
NFKB1-203ENST00000502367 SENP3-EIF4A1A0A087X0R7 540 aa9.98□□□□□ -0.81
NFKB1-203ENST00000502367 SOX11P35716 441 aa9.98□□□□□ -0.81
NFKB1-203ENST00000502367 GMPRP36959 345 aa9.98□□□□□ -0.81
NFKB1-203ENST00000502367 RNF144AP50876 292 aaPredicted RBP9.98□□□□□ -0.81
NFKB1-203ENST00000502367 POU4F2Q12837 409 aa9.98□□□□□ -0.81
NFKB1-203ENST00000502367 USP4Q13107 963 aa9.98□□□□□ -0.81
NFKB1-203ENST00000502367 LYSMD3Q7Z3D4 306 aa9.98□□□□□ -0.81
NFKB1-203ENST00000502367 CCDC125Q86Z20 511 aa9.98□□□□□ -0.81
NFKB1-203ENST00000502367 WWC1Q8IX03 1113 aa9.98□□□□□ -0.81
NFKB1-203ENST00000502367 CCDC155Q8N6L0 562 aa9.98□□□□□ -0.81
NFKB1-203ENST00000502367 CNKSR1Q969H4 720 aa9.98□□□□□ -0.81
NFKB1-203ENST00000502367 SLC35F4A4IF30 521 aa9.97□□□□□ -0.81
NFKB1-203ENST00000502367 CLN3Q13286 438 aa9.97□□□□□ -0.81
NFKB1-203ENST00000502367 TBC1D9Q6ZT07 1266 aa9.97□□□□□ -0.81
NFKB1-203ENST00000502367 GPR161Q8N6U8 529 aaKnown RBP9.97□□□□□ -0.81
NFKB1-203ENST00000502367 NLRP3Q96P20 1036 aa9.97□□□□□ -0.81
NFKB1-203ENST00000502367 ETNK1Q9HBU6 452 aa9.97□□□□□ -0.81
NFKB1-203ENST00000502367 SLC27A3Q5K4L6 730 aa9.96□□□□□ -0.82
NFKB1-203ENST00000502367 SLC16A10Q8TF71 515 aa9.96□□□□□ -0.82
NFKB1-203ENST00000502367 CUEDC1Q9NWM3 386 aaPredicted RBP9.96□□□□□ -0.82
NFKB1-203ENST00000502367 CENPCQ03188 943 aa9.95□□□□□ -0.82
NFKB1-203ENST00000502367 GRIP2Q9C0E4 1043 aa9.95□□□□□ -0.82
NFKB1-203ENST00000502367 GNRH1P01148 92 aa9.94□□□□□ -0.82
NFKB1-203ENST00000502367 PHKA2P46019 1235 aa9.94□□□□□ -0.82
NFKB1-203ENST00000502367 NCOA4Q13772 614 aa9.94□□□□□ -0.82
NFKB1-203ENST00000502367 GLMNQ92990 594 aa9.94□□□□□ -0.82
NFKB1-203ENST00000502367 ESYT1Q9BSJ8 1104 aa9.94□□□□□ -0.82
NFKB1-203ENST00000502367 ZNF777Q9ULD5 760 aaPredicted RBP9.94□□□□□ -0.82
NFKB1-203ENST00000502367 SCNN1DP51172 638 aa9.93□□□□□ -0.82
NFKB1-203ENST00000502367 MAP7D1Q3KQU3 841 aa9.93□□□□□ -0.82
NFKB1-203ENST00000502367 VWA5B2Q8N398 1253 aa9.93□□□□□ -0.82
NFKB1-203ENST00000502367 XAGE2Q96GT9 111 aa9.93□□□□□ -0.82
NFKB1-203ENST00000502367 SERTAD1Q9UHV2 236 aa9.93□□□□□ -0.82
NFKB1-203ENST00000502367 PCDHGA11Q9Y5H2 935 aa9.93□□□□□ -0.82
NFKB1-203ENST00000502367 HRH3Q9Y5N1 445 aa9.93□□□□□ -0.82
NFKB1-203ENST00000502367 A6NJR5 290 aa9.92□□□□□ -0.82
NFKB1-203ENST00000502367 NPAS3Q8IXF0 933 aa9.92□□□□□ -0.82
NFKB1-203ENST00000502367 IRF7Q92985 503 aa9.92□□□□□ -0.82
NFKB1-203ENST00000502367 USP17L5A8MUK1 530 aa9.91□□□□□ -0.82
NFKB1-203ENST00000502367 HMGXB3Q12766 1538 aa9.91□□□□□ -0.82
NFKB1-203ENST00000502367 CDC14CA4D256 554 aa9.9□□□□□ -0.82
NFKB1-203ENST00000502367 TMEM229AB2RXF0 380 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms