RNA–Protein interactions for RNA: ENST00000499786.4

MED28-202, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-202ENST00000499786 MRS2Q9HD23 443 aa9.47□□□□□ -0.89
MED28-202ENST00000499786 TMEM2Q9UHN6 1383 aa9.47□□□□□ -0.89
MED28-202ENST00000499786 DLC1Q96QB1 1528 aa9.46□□□□□ -0.89
MED28-202ENST00000499786 KNDC1Q76NI1 1749 aa9.46□□□□□ -0.89
MED28-202ENST00000499786 NBPF26B4DH59 902 aa9.46□□□□□ -0.9
MED28-202ENST00000499786 TMEM132EQ6IEE7 984 aa9.46□□□□□ -0.9
MED28-202ENST00000499786 ANKRD13DQ6ZTN6 518 aa9.46□□□□□ -0.9
MED28-202ENST00000499786 TMUB1Q9BVT8 246 aa9.46□□□□□ -0.9
MED28-202ENST00000499786 PNMA3Q9UL41 463 aa9.46□□□□□ -0.9
MED28-202ENST00000499786 EID1Q9Y6B2 187 aa9.46□□□□□ -0.9
MED28-202ENST00000499786 EVC2Q86UK5 1308 aa9.46□□□□□ -0.9
MED28-202ENST00000499786 SETD1AO15047 1707 aaKnown RBP9.45□□□□□ -0.9
MED28-202ENST00000499786 SMAPO00193 183 aa9.45□□□□□ -0.9
MED28-202ENST00000499786 CNGB1Q14028 1251 aaPredicted RBP9.45□□□□□ -0.9
MED28-202ENST00000499786 RBM46Q8TBY0 533 aaKnown RBP9.45□□□□□ -0.9
MED28-202ENST00000499786 POGKQ9P215 609 aa9.45□□□□□ -0.9
MED28-202ENST00000499786 KNSTRNQ9Y448 316 aa9.45□□□□□ -0.9
MED28-202ENST00000499786 MYBBP1AQ9BQG0 1328 aaKnown RBP9.45□□□□□ -0.9
MED28-202ENST00000499786 DIP2AQ14689 1571 aa9.45□□□□□ -0.9
MED28-202ENST00000499786 CEP170BQ9Y4F5 1589 aaPredicted RBP9.45□□□□□ -0.9
MED28-202ENST00000499786 ZNF142P52746 1687 aaPredicted RBP9.45□□□□□ -0.9
MED28-202ENST00000499786 ADAMTSL3P82987 1691 aa9.45□□□□□ -0.9
MED28-202ENST00000499786 PANK3Q9H999 370 aa9.44□□□□□ -0.9
MED28-202ENST00000499786 STK26Q9P289 416 aa9.44□□□□□ -0.9
MED28-202ENST00000499786 LRPPRCP42704 1394 aaKnown RBP9.44□□□□□ -0.9
MED28-202ENST00000499786 PLEKHG1Q9ULL1 1385 aa9.44□□□□□ -0.9
MED28-202ENST00000499786 NINLQ9Y2I6 1382 aa9.44□□□□□ -0.9
MED28-202ENST00000499786 SLIT1O75093 1534 aa9.44□□□□□ -0.9
MED28-202ENST00000499786 NRXN3Q9Y4C0 1643 aa9.44□□□□□ -0.9
MED28-202ENST00000499786 TULP4Q9NRJ4 1543 aa9.43□□□□□ -0.9
MED28-202ENST00000499786 PTPRMP28827 1452 aa9.43□□□□□ -0.9
MED28-202ENST00000499786 BRD4O60885 1362 aaPredicted RBP9.43□□□□□ -0.9
MED28-202ENST00000499786 ATAD2Q6PL18 1390 aa9.43□□□□□ -0.9
MED28-202ENST00000499786 PDE4DQ08499 809 aa9.43□□□□□ -0.9
MED28-202ENST00000499786 LAPTM4BQ86VI4 370 aa9.43□□□□□ -0.9
MED28-202ENST00000499786 CPS1P31327 1500 aa9.42□□□□□ -0.9
MED28-202ENST00000499786 PARD3Q8TEW0 1356 aa9.42□□□□□ -0.9
MED28-202ENST00000499786 RCCD1A6NED2 376 aa9.42□□□□□ -0.9
MED28-202ENST00000499786 CEBPAP49715 358 aaPredicted RBP9.42□□□□□ -0.9
MED28-202ENST00000499786 THEMISQ8N1K5 641 aaPredicted RBP9.42□□□□□ -0.9
MED28-202ENST00000499786 TMC1Q8TDI8 760 aa9.42□□□□□ -0.9
MED28-202ENST00000499786 PUS7Q96PZ0 661 aaKnown RBP9.42□□□□□ -0.9
MED28-202ENST00000499786 REPIN1Q9BWE0 567 aaKnown RBP9.42□□□□□ -0.9
MED28-202ENST00000499786 SEPT9Q9UHD8 586 aaPredicted RBP9.42□□□□□ -0.9
MED28-202ENST00000499786 ARHGAP23Q9P227 1491 aa9.41□□□□□ -0.9
MED28-202ENST00000499786 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.41□□□□□ -0.9
MED28-202ENST00000499786 FAM98CQ17RN3 349 aaKnown RBP9.41□□□□□ -0.9
MED28-202ENST00000499786 NLRP13Q86W25 1043 aa9.41□□□□□ -0.9
MED28-202ENST00000499786 PRAM1Q96QH2 718 aa9.41□□□□□ -0.9
MED28-202ENST00000499786 USP32Q8NFA0 1604 aa9.41□□□□□ -0.9
MED28-202ENST00000499786 NPC1L1Q9UHC9 1359 aa9.4□□□□□ -0.9
MED28-202ENST00000499786 BRPF1P55201 1214 aaPredicted RBP9.4□□□□□ -0.9
MED28-202ENST00000499786 SRPK2P78362 688 aaKnown RBP9.4□□□□□ -0.9
MED28-202ENST00000499786 SAFB2Q14151 953 aaKnown RBP eCLIP9.4□□□□□ -0.9
MED28-202ENST00000499786 CC2D1BQ5T0F9 858 aaKnown RBP9.4□□□□□ -0.9
MED28-202ENST00000499786 NBPF3Q9H094 633 aa9.4□□□□□ -0.9
MED28-202ENST00000499786 TECPR2O15040 1411 aa9.39□□□□□ -0.91
MED28-202ENST00000499786 ABCC11Q96J66 1382 aa9.39□□□□□ -0.91
MED28-202ENST00000499786 DNAJB2P25686 324 aa9.39□□□□□ -0.91
MED28-202ENST00000499786 HNRNPUQ00839 825 aaKnown RBP eCLIP9.39□□□□□ -0.91
MED28-202ENST00000499786 TXNDC2Q86VQ3 553 aa9.39□□□□□ -0.91
MED28-202ENST00000499786 PARP9Q8IXQ6 854 aa9.39□□□□□ -0.91
MED28-202ENST00000499786 FAM9BQ8IZU0 186 aa9.39□□□□□ -0.91
MED28-202ENST00000499786 NLRP7Q8WX94 980 aa9.39□□□□□ -0.91
MED28-202ENST00000499786 TMEM134Q9H6X4 195 aa9.39□□□□□ -0.91
MED28-202ENST00000499786 FAM135BQ49AJ0 1406 aa9.39□□□□□ -0.91
MED28-202ENST00000499786 NSD3Q9BZ95 1437 aa9.39□□□□□ -0.91
MED28-202ENST00000499786 NSD2O96028 1365 aa9.37□□□□□ -0.91
MED28-202ENST00000499786 ANKRD36BQ8N2N9 1353 aa9.37□□□□□ -0.91
MED28-202ENST00000499786 PER1O15534 1290 aaPredicted RBP9.37□□□□□ -0.91
MED28-202ENST00000499786 MRPL50Q8N5N7 158 aaKnown RBP9.37□□□□□ -0.91
MED28-202ENST00000499786 ZFRQ96KR1 1074 aaKnown RBP9.37□□□□□ -0.91
MED28-202ENST00000499786 ADAMTS13Q76LX8 1427 aa9.37□□□□□ -0.91
MED28-202ENST00000499786 METP08581 1390 aa9.37□□□□□ -0.91
MED28-202ENST00000499786 CGNL1Q0VF96 1302 aa9.36□□□□□ -0.91
MED28-202ENST00000499786 CLCN1P35523 988 aa9.36□□□□□ -0.91
MED28-202ENST00000499786 MDM2Q00987 491 aaPredicted RBP9.36□□□□□ -0.91
MED28-202ENST00000499786 HDGFL2Q7Z4V5 671 aaPredicted RBP9.36□□□□□ -0.91
MED28-202ENST00000499786 GPCPD1Q9NPB8 672 aa9.36□□□□□ -0.91
MED28-202ENST00000499786 TERF2IPQ9NYB0 399 aa9.36□□□□□ -0.91
MED28-202ENST00000499786 DAXXQ9UER7 740 aaPredicted RBP9.36□□□□□ -0.91
MED28-202ENST00000499786 PTCH1Q13635 1447 aa9.36□□□□□ -0.91
MED28-202ENST00000499786 ADGRB2O60241 1585 aa9.36□□□□□ -0.91
MED28-202ENST00000499786 SETD1BQ9UPS6 1966 aaKnown RBP9.35□□□□□ -0.91
MED28-202ENST00000499786 SIRT1Q96EB6 747 aa9.35□□□□□ -0.91
MED28-202ENST00000499786 GPBP1L1Q9HC44 474 aaPredicted RBP9.35□□□□□ -0.91
MED28-202ENST00000499786 ATP7BP35670 1465 aa9.34□□□□□ -0.91
MED28-202ENST00000499786 LTKP29376 864 aa9.34□□□□□ -0.91
MED28-202ENST00000499786 PIK3R4Q99570 1358 aa9.34□□□□□ -0.91
MED28-202ENST00000499786 MED14O60244 1454 aa9.34□□□□□ -0.91
MED28-202ENST00000499786 ITSN1Q15811 1721 aa9.34□□□□□ -0.92
MED28-202ENST00000499786 ZBED9Q6R2W3 1325 aa9.33□□□□□ -0.92
MED28-202ENST00000499786 KIF20BQ96Q89 1820 aa9.33□□□□□ -0.92
MED28-202ENST00000499786 WDR43Q15061 677 aaKnown RBP eCLIP9.33□□□□□ -0.92
MED28-202ENST00000499786 CCDC184Q52MB2 194 aa9.33□□□□□ -0.92
MED28-202ENST00000499786 SWT1Q5T5J6 900 aaKnown RBP9.33□□□□□ -0.92
MED28-202ENST00000499786 GIGYF2Q6Y7W6 1299 aaKnown RBP9.33□□□□□ -0.92
MED28-202ENST00000499786 ANKLE2Q86XL3 938 aa9.33□□□□□ -0.92
MED28-202ENST00000499786 CDK19Q9BWU1 502 aa9.33□□□□□ -0.92
MED28-202ENST00000499786 KDM4CQ9H3R0 1056 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms