RNA–Protein interactions for RNA: ENST00000499732.2

NEAT1-201, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 1,811 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-201ENST00000499732 MAP3K19Q56UN5 1328 aa18.48■□□□□ 0.55
NEAT1-201ENST00000499732 UPF1Q92900 1129 aaKnown RBP eCLIP18.48■□□□□ 0.55
NEAT1-201ENST00000499732 HMOX1P09601 288 aa18.47■□□□□ 0.55
NEAT1-201ENST00000499732 SLIT3O75094 1523 aa18.47■□□□□ 0.55
NEAT1-201ENST00000499732 EIF4A2Q14240 407 aaKnown RBP18.46■□□□□ 0.55
NEAT1-201ENST00000499732 FRAT1Q92837 279 aaPredicted RBP18.46■□□□□ 0.55
NEAT1-201ENST00000499732 FLT4P35916 1363 aa18.46■□□□□ 0.55
NEAT1-201ENST00000499732 NFAT5O94916 1531 aa18.46■□□□□ 0.55
NEAT1-201ENST00000499732 DLG5Q8TDM6 1919 aa18.45■□□□□ 0.54
NEAT1-201ENST00000499732 RIPK4P57078 832 aa18.45■□□□□ 0.54
NEAT1-201ENST00000499732 BECN1Q14457 450 aa18.45■□□□□ 0.54
NEAT1-201ENST00000499732 USP21Q9UK80 565 aa18.45■□□□□ 0.54
NEAT1-201ENST00000499732 AMPHP49418 695 aa18.44■□□□□ 0.54
NEAT1-201ENST00000499732 HSP90AB2PQ58FF8 381 aa18.44■□□□□ 0.54
NEAT1-201ENST00000499732 PHACTR3Q96KR7 559 aa18.44■□□□□ 0.54
NEAT1-201ENST00000499732 TRPC5Q9UL62 973 aaPredicted RBP18.44■□□□□ 0.54
NEAT1-201ENST00000499732 COG6Q9Y2V7 657 aa18.44■□□□□ 0.54
NEAT1-201ENST00000499732 SPATA31A3Q5VYP0 1347 aa18.44■□□□□ 0.54
NEAT1-201ENST00000499732 ARHGEF10O15013 1369 aa18.44■□□□□ 0.54
NEAT1-201ENST00000499732 RARSP54136 660 aaKnown RBP18.44■□□□□ 0.54
NEAT1-201ENST00000499732 LTN1O94822 1766 aa18.43■□□□□ 0.54
NEAT1-201ENST00000499732 RTL1A6NKG5 1358 aa18.43■□□□□ 0.54
NEAT1-201ENST00000499732 PLEKHG5O94827 1062 aa18.43■□□□□ 0.54
NEAT1-201ENST00000499732 GCP02774 474 aa18.43■□□□□ 0.54
NEAT1-201ENST00000499732 FNBP4Q8N3X1 1017 aaPredicted RBP18.43■□□□□ 0.54
NEAT1-201ENST00000499732 PANK1Q8TE04 598 aa18.43■□□□□ 0.54
NEAT1-201ENST00000499732 PHRF1Q9P1Y6 1649 aaKnown RBP18.43■□□□□ 0.54
NEAT1-201ENST00000499732 FRAT2O75474 233 aaPredicted RBP18.42■□□□□ 0.54
NEAT1-201ENST00000499732 MYH16Q9H6N6 1097 aa18.42■□□□□ 0.54
NEAT1-201ENST00000499732 NFE2L2Q16236 605 aa18.42■□□□□ 0.54
NEAT1-201ENST00000499732 CRYBG1Q9Y4K1 1723 aa18.41■□□□□ 0.54
NEAT1-201ENST00000499732 IL16Q14005 1332 aa18.41■□□□□ 0.54
NEAT1-201ENST00000499732 HOXC9P31274 260 aa18.4■□□□□ 0.54
NEAT1-201ENST00000499732 AEBP1Q8IUX7 1158 aa18.39■□□□□ 0.54
NEAT1-201ENST00000499732 RGS12O14924 1447 aa18.39■□□□□ 0.53
NEAT1-201ENST00000499732 ARHGEF25Q86VW2 580 aa18.39■□□□□ 0.53
NEAT1-201ENST00000499732 IP6K1Q92551 441 aa18.39■□□□□ 0.53
NEAT1-201ENST00000499732 COL22A1Q8NFW1 1626 aaPredicted RBP18.39■□□□□ 0.53
NEAT1-201ENST00000499732 SULT6B1Q6IMI4 303 aa18.38■□□□□ 0.53
NEAT1-201ENST00000499732 UPF2Q9HAU5 1272 aaKnown RBP18.38■□□□□ 0.53
NEAT1-201ENST00000499732 BRPF3Q9ULD4 1205 aa18.38■□□□□ 0.53
NEAT1-201ENST00000499732 ABCA3Q99758 1704 aa18.37■□□□□ 0.53
NEAT1-201ENST00000499732 CT47B1P0C2W7 299 aaPredicted RBP18.37■□□□□ 0.53
NEAT1-201ENST00000499732 TSR2Q969E8 191 aaKnown RBP18.37■□□□□ 0.53
NEAT1-201ENST00000499732 RTN4Q9NQC3 1192 aaKnown RBP18.37■□□□□ 0.53
NEAT1-201ENST00000499732 ZBTB7CA1YPR0 619 aa18.35■□□□□ 0.53
NEAT1-201ENST00000499732 SEC24BO95487 1268 aa18.35■□□□□ 0.53
NEAT1-201ENST00000499732 RWDD1Q9H446 243 aaPredicted RBP18.35■□□□□ 0.53
NEAT1-201ENST00000499732 ATRNO75882 1429 aa18.35■□□□□ 0.53
NEAT1-201ENST00000499732 KDRP35968 1356 aa18.35■□□□□ 0.53
NEAT1-201ENST00000499732 CABLES1Q8TDN4 633 aa18.35■□□□□ 0.53
NEAT1-201ENST00000499732 TBC1D32Q96NH3 1257 aa18.35■□□□□ 0.53
NEAT1-201ENST00000499732 PCDHB15Q9Y5E8 787 aa18.35■□□□□ 0.53
NEAT1-201ENST00000499732 IGSF1Q8N6C5 1336 aa18.34■□□□□ 0.53
NEAT1-201ENST00000499732 RLBP1P12271 317 aa18.33■□□□□ 0.53
NEAT1-201ENST00000499732 HAP1P54257 671 aaPredicted RBP18.33■□□□□ 0.53
NEAT1-201ENST00000499732 EXOSC9Q06265 439 aaKnown RBP18.33■□□□□ 0.52
NEAT1-201ENST00000499732 PDZRN3Q9UPQ7 1066 aa18.33■□□□□ 0.52
NEAT1-201ENST00000499732 LMOD3Q0VAK6 560 aa18.32■□□□□ 0.52
NEAT1-201ENST00000499732 MVPQ14764 893 aaKnown RBP18.32■□□□□ 0.52
NEAT1-201ENST00000499732 EYA1Q99502 592 aa18.32■□□□□ 0.52
NEAT1-201ENST00000499732 THUMPD2Q9BTF0 503 aaKnown RBP18.31■□□□□ 0.52
NEAT1-201ENST00000499732 ZC3H6P61129 1189 aaKnown RBP18.3■□□□□ 0.52
NEAT1-201ENST00000499732 CALD1Q05682 793 aaKnown RBP18.3■□□□□ 0.52
NEAT1-201ENST00000499732 ANTXR1Q9H6X2 564 aa18.3■□□□□ 0.52
NEAT1-201ENST00000499732 CPDO75976 1380 aa18.3■□□□□ 0.52
NEAT1-201ENST00000499732 ABCC6O95255 1503 aa18.3■□□□□ 0.52
NEAT1-201ENST00000499732 BCL9LQ86UU0 1499 aa18.3■□□□□ 0.52
NEAT1-201ENST00000499732 ZKSCAN2Q63HK3 967 aa18.3■□□□□ 0.52
NEAT1-201ENST00000499732 UNC5CLQ8IV45 518 aa18.3■□□□□ 0.52
NEAT1-201ENST00000499732 GJD4Q96KN9 370 aaPredicted RBP18.3■□□□□ 0.52
NEAT1-201ENST00000499732 ANO8Q9HCE9 1232 aaPredicted RBP18.29■□□□□ 0.52
NEAT1-201ENST00000499732 ZNF853P0CG23 659 aa18.28■□□□□ 0.52
NEAT1-201ENST00000499732 IFT57Q9NWB7 429 aa18.28■□□□□ 0.52
NEAT1-201ENST00000499732 COL18A1P39060 1754 aa18.28■□□□□ 0.52
NEAT1-201ENST00000499732 FAM83GA6ND36 823 aa18.28■□□□□ 0.52
NEAT1-201ENST00000499732 LTV1Q96GA3 475 aaPredicted RBP18.28■□□□□ 0.52
NEAT1-201ENST00000499732 KIAA0232Q92628 1395 aa18.28■□□□□ 0.52
NEAT1-201ENST00000499732 RGPD5Q99666 1765 aa18.27■□□□□ 0.52
NEAT1-201ENST00000499732 TNNQ9UQP3 1299 aa18.27■□□□□ 0.52
NEAT1-201ENST00000499732 GNAI1P63096 354 aa18.26■□□□□ 0.51
NEAT1-201ENST00000499732 CCDC125Q86Z20 511 aa18.26■□□□□ 0.51
NEAT1-201ENST00000499732 DZIP1LQ8IYY4 767 aaKnown RBP18.26■□□□□ 0.51
NEAT1-201ENST00000499732 FAM43AQ8N2R8 423 aa18.26■□□□□ 0.51
NEAT1-201ENST00000499732 BCL2L13Q9BXK5 485 aa18.26■□□□□ 0.51
NEAT1-201ENST00000499732 RGPD2P0DJD1 1756 aa18.26■□□□□ 0.51
NEAT1-201ENST00000499732 FTSJ3Q8IY81 847 aaKnown RBP18.26■□□□□ 0.51
NEAT1-201ENST00000499732 AXIN2Q9Y2T1 843 aa18.26■□□□□ 0.51
NEAT1-201ENST00000499732 HDAC1Q13547 482 aaPredicted RBP18.25■□□□□ 0.51
NEAT1-201ENST00000499732 DCTN1Q14203 1278 aa18.25■□□□□ 0.51
NEAT1-201ENST00000499732 L1TD1Q5T7N2 865 aaKnown RBP18.25■□□□□ 0.51
NEAT1-201ENST00000499732 ANKRD24Q8TF21 1146 aa18.25■□□□□ 0.51
NEAT1-201ENST00000499732 TBC1D2Q9BYX2 928 aa18.25■□□□□ 0.51
NEAT1-201ENST00000499732 SLKQ9H2G2 1235 aaPredicted RBP18.25■□□□□ 0.51
NEAT1-201ENST00000499732 SLIT2O94813 1529 aa18.25■□□□□ 0.51
NEAT1-201ENST00000499732 CFAP44Q96MT7 982 aa18.24■□□□□ 0.51
NEAT1-201ENST00000499732 CHRNA2Q15822 529 aa18.23■□□□□ 0.51
NEAT1-201ENST00000499732 MTHFSDQ2M296 383 aaKnown RBP18.23■□□□□ 0.51
NEAT1-201ENST00000499732 MBIPQ9NS73 344 aa18.23■□□□□ 0.51
NEAT1-201ENST00000499732 ERBB3P21860 1342 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms