RNA–Protein interactions for RNA: ENST00000498524.5

ANKRD28-213, Transcript of ankyrin repeat domain 28, human

TSL 2

Gene ANKRD28, Length 4,289 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ANKRD28-213	ENST00000498524	CD2AP	Q9Y5K6	639 aa		4.97	□□□□□ -1.61
ANKRD28-213	ENST00000498524	PTPN23	Q9H3S7	1636 aa		4.97	□□□□□ -1.61
ANKRD28-213	ENST00000498524	KIF7	Q2M1P5	1343 aa		4.97	□□□□□ -1.61
ANKRD28-213	ENST00000498524	GC	P02774	474 aa		4.97	□□□□□ -1.61
ANKRD28-213	ENST00000498524	TRAPPC3L	Q5T215	181 aa		4.97	□□□□□ -1.61
ANKRD28-213	ENST00000498524	WAPL	Q7Z5K2	1190 aa		4.97	□□□□□ -1.61
ANKRD28-213	ENST00000498524	GCC1	Q96CN9	775 aa		4.97	□□□□□ -1.61
ANKRD28-213	ENST00000498524	RBM42	Q9BTD8	480 aa	Known RBP	4.97	□□□□□ -1.61
ANKRD28-213	ENST00000498524	KNSTRN	Q9Y448	316 aa		4.97	□□□□□ -1.61
ANKRD28-213	ENST00000498524	SPATA31A5	Q5VU36	1347 aa		4.96	□□□□□ -1.61
ANKRD28-213	ENST00000498524	SPATA31A7	Q8IWB4	1347 aa		4.96	□□□□□ -1.61
ANKRD28-213	ENST00000498524	KTN1	Q86UP2	1357 aa	Known RBP	4.96	□□□□□ -1.61
ANKRD28-213	ENST00000498524	INO80	Q9ULG1	1556 aa	Predicted RBP	4.96	□□□□□ -1.61
ANKRD28-213	ENST00000498524	MAST1	Q9Y2H9	1570 aa		4.96	□□□□□ -1.61
ANKRD28-213	ENST00000498524	TXNRD1	Q16881	649 aa		4.96	□□□□□ -1.61
ANKRD28-213	ENST00000498524	GRIPAP1	Q4V328	841 aa		4.96	□□□□□ -1.61
ANKRD28-213	ENST00000498524	CABLES1	Q8TDN4	633 aa		4.96	□□□□□ -1.61
ANKRD28-213	ENST00000498524	PDE6B	P35913	854 aa		4.96	□□□□□ -1.62
ANKRD28-213	ENST00000498524	CABP4	P57796	275 aa		4.96	□□□□□ -1.62
ANKRD28-213	ENST00000498524	EZH2	Q15910	746 aa	Known RBP	4.96	□□□□□ -1.62
ANKRD28-213	ENST00000498524	ZNF330	Q9Y3S2	320 aa	Predicted RBP	4.96	□□□□□ -1.62
ANKRD28-213	ENST00000498524	LMTK2	Q8IWU2	1503 aa		4.96	□□□□□ -1.62
ANKRD28-213	ENST00000498524	MAP3K5	Q99683	1374 aa		4.96	□□□□□ -1.62
ANKRD28-213	ENST00000498524	RRP1	P56182	461 aa	Known RBP	4.96	□□□□□ -1.62
ANKRD28-213	ENST00000498524	EIF6	P56537	245 aa	Known RBP	4.96	□□□□□ -1.62
ANKRD28-213	ENST00000498524	AMOT	Q4VCS5	1084 aa		4.96	□□□□□ -1.62
ANKRD28-213	ENST00000498524	CFAP70	Q5T0N1	1121 aa		4.96	□□□□□ -1.62
ANKRD28-213	ENST00000498524	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	4.96	□□□□□ -1.62	6e-7	■■■■□ 23.3
ANKRD28-213	ENST00000498524	MYBBP1A	Q9BQG0	1328 aa	Known RBP	4.96	□□□□□ -1.62
ANKRD28-213	ENST00000498524	POLR3A	O14802	1390 aa	Predicted RBP	4.96	□□□□□ -1.62
ANKRD28-213	ENST00000498524	PDE4A	P27815	886 aa		4.95	□□□□□ -1.62
ANKRD28-213	ENST00000498524	ZNF142	P52746	1687 aa	Predicted RBP	4.95	□□□□□ -1.62
ANKRD28-213	ENST00000498524	SET	Q01105	290 aa	Predicted RBP	4.95	□□□□□ -1.62
ANKRD28-213	ENST00000498524	GOLGA2	Q08379	1002 aa		4.95	□□□□□ -1.62
ANKRD28-213	ENST00000498524	ZFYVE9	O95405	1425 aa		4.95	□□□□□ -1.62
ANKRD28-213	ENST00000498524	MFAP1	P55081	439 aa	Known RBP	4.95	□□□□□ -1.62
ANKRD28-213	ENST00000498524	DALRD3	Q5D0E6	543 aa	Known RBP	4.95	□□□□□ -1.62
ANKRD28-213	ENST00000498524	SUPT20H	Q8NEM7	779 aa		4.95	□□□□□ -1.62
ANKRD28-213	ENST00000498524	PLEKHG2	Q9H7P9	1386 aa		4.95	□□□□□ -1.62
ANKRD28-213	ENST00000498524	PLXNC1	O60486	1568 aa		4.95	□□□□□ -1.62
ANKRD28-213	ENST00000498524	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	4.94	□□□□□ -1.62
ANKRD28-213	ENST00000498524	PHLPP1	O60346	1717 aa		4.94	□□□□□ -1.62
ANKRD28-213	ENST00000498524	ADGRL2	O95490	1459 aa		4.94	□□□□□ -1.62
ANKRD28-213	ENST00000498524	YTHDC2	Q9H6S0	1430 aa	Known RBP	4.94	□□□□□ -1.62
ANKRD28-213	ENST00000498524	PCDH11X	Q9BZA7	1347 aa		4.94	□□□□□ -1.62
ANKRD28-213	ENST00000498524	PCDH11Y	Q9BZA8	1340 aa		4.94	□□□□□ -1.62
ANKRD28-213	ENST00000498524		H0YIN7	160 aa		4.94	□□□□□ -1.62
ANKRD28-213	ENST00000498524	FSTL1	Q12841	308 aa		4.94	□□□□□ -1.62
ANKRD28-213	ENST00000498524	ATP7B	P35670	1465 aa		4.94	□□□□□ -1.62
ANKRD28-213	ENST00000498524	MST1R	Q04912	1400 aa		4.94	□□□□□ -1.62
ANKRD28-213	ENST00000498524	ACE	P12821	1306 aa		4.94	□□□□□ -1.62
ANKRD28-213	ENST00000498524	CC2D2B	Q6DHV5	1058 aa		4.94	□□□□□ -1.62
ANKRD28-213	ENST00000498524	CNKSR1	Q969H4	720 aa		4.94	□□□□□ -1.62
ANKRD28-213	ENST00000498524	PIM2	Q9P1W9	311 aa		4.94	□□□□□ -1.62
ANKRD28-213	ENST00000498524	ATRN	O75882	1429 aa		4.94	□□□□□ -1.62
ANKRD28-213	ENST00000498524	SPATA31A1	Q5TZJ5	1347 aa		4.94	□□□□□ -1.62
ANKRD28-213	ENST00000498524	CA12	O43570	354 aa		4.93	□□□□□ -1.62
ANKRD28-213	ENST00000498524	AAMP	Q13685	434 aa		4.93	□□□□□ -1.62
ANKRD28-213	ENST00000498524	CCDC184	Q52MB2	194 aa		4.93	□□□□□ -1.62
ANKRD28-213	ENST00000498524	IFNL2	Q8IZJ0	200 aa		4.93	□□□□□ -1.62
ANKRD28-213	ENST00000498524	ANKRD24	Q8TF21	1146 aa		4.93	□□□□□ -1.62
ANKRD28-213	ENST00000498524	FBXW7	Q969H0	707 aa		4.93	□□□□□ -1.62
ANKRD28-213	ENST00000498524	GZF1	Q9H116	711 aa	Predicted RBP	4.93	□□□□□ -1.62
ANKRD28-213	ENST00000498524	ASXL1	Q8IXJ9	1541 aa		4.93	□□□□□ -1.62
ANKRD28-213	ENST00000498524	KIDINS220	Q9ULH0	1771 aa		4.93	□□□□□ -1.62
ANKRD28-213	ENST00000498524	WDR17	Q8IZU2	1322 aa		4.93	□□□□□ -1.62
ANKRD28-213	ENST00000498524	PTMA	P06454	111 aa	Known RBP	4.93	□□□□□ -1.62
ANKRD28-213	ENST00000498524	HSPA6	P17066	643 aa		4.93	□□□□□ -1.62
ANKRD28-213	ENST00000498524	VASP	P50552	380 aa	Predicted RBP	4.93	□□□□□ -1.62
ANKRD28-213	ENST00000498524	HDAC9	Q9UKV0	1011 aa		4.93	□□□□□ -1.62
ANKRD28-213	ENST00000498524	MAPK8IP3	Q9UPT6	1336 aa		4.93	□□□□□ -1.62
ANKRD28-213	ENST00000498524	CAPN15	O75808	1086 aa		4.93	□□□□□ -1.62
ANKRD28-213	ENST00000498524	GSE1	Q14687	1217 aa		4.93	□□□□□ -1.62
ANKRD28-213	ENST00000498524	OTUD7B	Q6GQQ9	843 aa		4.93	□□□□□ -1.62
ANKRD28-213	ENST00000498524	MORC1	Q86VD1	984 aa		4.93	□□□□□ -1.62
ANKRD28-213	ENST00000498524	EXOC6	Q8TAG9	804 aa		4.93	□□□□□ -1.62
ANKRD28-213	ENST00000498524	ACSBG1	Q96GR2	724 aa		4.93	□□□□□ -1.62
ANKRD28-213	ENST00000498524	PRDM10	Q9NQV6	1147 aa		4.93	□□□□□ -1.62
ANKRD28-213	ENST00000498524	WDR70	Q9NW82	654 aa		4.93	□□□□□ -1.62
ANKRD28-213	ENST00000498524	HDAC5	Q9UQL6	1122 aa		4.93	□□□□□ -1.62
ANKRD28-213	ENST00000498524	PPIP5K1	Q6PFW1	1433 aa		4.93	□□□□□ -1.62
ANKRD28-213	ENST00000498524	PLEKHG3	A1L390	1219 aa		4.92	□□□□□ -1.62
ANKRD28-213	ENST00000498524	LMOD3	Q0VAK6	560 aa		4.92	□□□□□ -1.62
ANKRD28-213	ENST00000498524	DDX17	Q92841	729 aa	Known RBP	4.92	□□□□□ -1.62
ANKRD28-213	ENST00000498524	TOMM70	O94826	608 aa		4.92	□□□□□ -1.62
ANKRD28-213	ENST00000498524	VEGFA	P15692	232 aa	Predicted RBP	4.92	□□□□□ -1.62
ANKRD28-213	ENST00000498524	CTCF	P49711	727 aa	Predicted RBP	4.92	□□□□□ -1.62
ANKRD28-213	ENST00000498524	RGS3	P49796	1198 aa		4.92	□□□□□ -1.62
ANKRD28-213	ENST00000498524	CALD1	Q05682	793 aa	Known RBP	4.92	□□□□□ -1.62
ANKRD28-213	ENST00000498524	KIAA0232	Q92628	1395 aa		4.92	□□□□□ -1.62
ANKRD28-213	ENST00000498524	RGS12	O14924	1447 aa		4.92	□□□□□ -1.62
ANKRD28-213	ENST00000498524	POLR1A	O95602	1720 aa	Predicted RBP	4.92	□□□□□ -1.62
ANKRD28-213	ENST00000498524	L1TD1	Q5T7N2	865 aa	Known RBP	4.92	□□□□□ -1.62
ANKRD28-213	ENST00000498524	ZNF622	Q969S3	477 aa	Known RBP eCLIP	4.92	□□□□□ -1.62	1e-9	■□□□□ 8.3
ANKRD28-213	ENST00000498524	BCL2L13	Q9BXK5	485 aa		4.92	□□□□□ -1.62
ANKRD28-213	ENST00000498524	TGFB2	P61812	414 aa		4.92	□□□□□ -1.62
ANKRD28-213	ENST00000498524	CC2D1B	Q5T0F9	858 aa	Known RBP	4.92	□□□□□ -1.62
ANKRD28-213	ENST00000498524	KIF6	Q6ZMV9	814 aa		4.92	□□□□□ -1.62
ANKRD28-213	ENST00000498524	ANP32B	Q92688	251 aa	Known RBP	4.92	□□□□□ -1.62
ANKRD28-213	ENST00000498524	CRB1	P82279	1406 aa		4.91	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms