RNA–Protein interactions for RNA: ENST00000498474.2

PUDP-205, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 4

Gene PUDP, Length 1,040 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-205ENST00000498474 TSKSQ9UJT2 592 aa11.69□□□□□ -0.54
PUDP-205ENST00000498474 KNDC1Q76NI1 1749 aa11.69□□□□□ -0.54
PUDP-205ENST00000498474 PRAG1Q86YV5 1406 aa11.69□□□□□ -0.54
PUDP-205ENST00000498474 AFF2P51816 1311 aa11.68□□□□□ -0.54
PUDP-205ENST00000498474 C8orf37Q96NL8 207 aa11.68□□□□□ -0.54
PUDP-205ENST00000498474 C14orf93Q9H972 538 aaKnown RBP11.68□□□□□ -0.54
PUDP-205ENST00000498474 ARIH1Q9Y4X5 557 aaPredicted RBP11.68□□□□□ -0.54
PUDP-205ENST00000498474 ABCC11Q96J66 1382 aa11.67□□□□□ -0.54
PUDP-205ENST00000498474 SOWAHBA6NEL2 793 aa11.67□□□□□ -0.54
PUDP-205ENST00000498474 FOXO3O43524 673 aa11.67□□□□□ -0.54
PUDP-205ENST00000498474 TECPR2O15040 1411 aa11.67□□□□□ -0.54
PUDP-205ENST00000498474 CDC42BPGQ6DT37 1551 aa11.67□□□□□ -0.54
PUDP-205ENST00000498474 SOS2Q07890 1332 aaPredicted RBP11.66□□□□□ -0.54
PUDP-205ENST00000498474 NRXN1Q9ULB1 1477 aa11.66□□□□□ -0.54
PUDP-205ENST00000498474 ZNF772Q68DY9 489 aaPredicted RBP11.66□□□□□ -0.54
PUDP-205ENST00000498474 LAMC1P11047 1609 aa11.66□□□□□ -0.54
PUDP-205ENST00000498474 DCAF11Q8TEB1 546 aa11.65□□□□□ -0.54
PUDP-205ENST00000498474 PRAM1Q96QH2 718 aa11.65□□□□□ -0.54
PUDP-205ENST00000498474 TSHZ2Q9NRE2 1034 aa11.65□□□□□ -0.54
PUDP-205ENST00000498474 FMN2Q9NZ56 1722 aa11.65□□□□□ -0.54
PUDP-205ENST00000498474 MYOM2P54296 1465 aa11.64□□□□□ -0.55
PUDP-205ENST00000498474 WBP1LQ9NX94 342 aa11.64□□□□□ -0.55
PUDP-205ENST00000498474 FAM198AQ9UFP1 575 aa11.64□□□□□ -0.55
PUDP-205ENST00000498474 TRAK1Q9UPV9 953 aa11.64□□□□□ -0.55
PUDP-205ENST00000498474 DHX57Q6P158 1386 aaKnown RBP11.64□□□□□ -0.55
PUDP-205ENST00000498474 PXDNQ92626 1479 aa11.63□□□□□ -0.55
PUDP-205ENST00000498474 C3orf80F5H4A9 247 aa11.63□□□□□ -0.55
PUDP-205ENST00000498474 OSBPP22059 807 aa11.63□□□□□ -0.55
PUDP-205ENST00000498474 RXRBP28702 533 aa11.63□□□□□ -0.55
PUDP-205ENST00000498474 FAM98CQ17RN3 349 aaKnown RBP11.63□□□□□ -0.55
PUDP-205ENST00000498474 NGLY1Q96IV0 654 aa11.63□□□□□ -0.55
PUDP-205ENST00000498474 HIRIP3Q9BW71 556 aaPredicted RBP11.63□□□□□ -0.55
PUDP-205ENST00000498474 QTRT2Q9H974 415 aaKnown RBP11.63□□□□□ -0.55
PUDP-205ENST00000498474 CDHR5Q9HBB8 845 aa11.63□□□□□ -0.55
PUDP-205ENST00000498474 ACIN1Q9UKV3 1341 aaKnown RBP11.62□□□□□ -0.55
PUDP-205ENST00000498474 SMAPO00193 183 aa11.62□□□□□ -0.55
PUDP-205ENST00000498474 IFFO2Q5TF58 517 aa11.62□□□□□ -0.55
PUDP-205ENST00000498474 CDCA7LQ96GN5 454 aa11.62□□□□□ -0.55
PUDP-205ENST00000498474 NPHP3Q7Z494 1330 aa11.61□□□□□ -0.55
PUDP-205ENST00000498474 PACS2Q86VP3 889 aa11.61□□□□□ -0.55
PUDP-205ENST00000498474 POGKQ9P215 609 aa11.61□□□□□ -0.55
PUDP-205ENST00000498474 MINK1Q8N4C8 1332 aaPredicted RBP11.6□□□□□ -0.55
PUDP-205ENST00000498474 ADGRB1O14514 1584 aa11.6□□□□□ -0.55
PUDP-205ENST00000498474 PRSS12P56730 875 aa11.6□□□□□ -0.55
PUDP-205ENST00000498474 PMFBP1Q8TBY8 1022 aa11.6□□□□□ -0.55
PUDP-205ENST00000498474 COL22A1Q8NFW1 1626 aaPredicted RBP11.6□□□□□ -0.55
PUDP-205ENST00000498474 HRCP23327 699 aa11.59□□□□□ -0.55
PUDP-205ENST00000498474 KRT28Q7Z3Y7 464 aa11.59□□□□□ -0.55
PUDP-205ENST00000498474 SIRT1Q96EB6 747 aa11.59□□□□□ -0.55
PUDP-205ENST00000498474 USP32Q8NFA0 1604 aa11.59□□□□□ -0.55
PUDP-205ENST00000498474 MARF1Q9Y4F3 1742 aaKnown RBP11.58□□□□□ -0.56
PUDP-205ENST00000498474 CABLES1Q8TDN4 633 aa11.58□□□□□ -0.56
PUDP-205ENST00000498474 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.58□□□□□ -0.56
PUDP-205ENST00000498474 USP21Q9UK80 565 aa11.58□□□□□ -0.56
PUDP-205ENST00000498474 KIF1AQ12756 1690 aa11.57□□□□□ -0.56
PUDP-205ENST00000498474 A0A0G2JS52 829 aa11.57□□□□□ -0.56
PUDP-205ENST00000498474 LMOD2Q6P5Q4 547 aa11.57□□□□□ -0.56
PUDP-205ENST00000498474 LRCH3Q96II8 777 aa11.57□□□□□ -0.56
PUDP-205ENST00000498474 HPS5Q9UPZ3 1129 aa11.57□□□□□ -0.56
PUDP-205ENST00000498474 EP400Q96L91 3159 aa11.57□□□□□ -0.56
PUDP-205ENST00000498474 RGS12O14924 1447 aa11.57□□□□□ -0.56
PUDP-205ENST00000498474 SPATA31A3Q5VYP0 1347 aa11.57□□□□□ -0.56
PUDP-205ENST00000498474 DLC1Q96QB1 1528 aa11.56□□□□□ -0.56
PUDP-205ENST00000498474 RBM6P78332 1123 aaKnown RBP11.56□□□□□ -0.56
PUDP-205ENST00000498474 PRR36Q9H6K5 1346 aa11.56□□□□□ -0.56
PUDP-205ENST00000498474 ARHGEF28Q8N1W1 1705 aaKnown RBP11.55□□□□□ -0.56
PUDP-205ENST00000498474 ITGBL1O95965 494 aaPredicted RBP11.55□□□□□ -0.56
PUDP-205ENST00000498474 NBPF1Q3BBV0 1214 aa11.55□□□□□ -0.56
PUDP-205ENST00000498474 FNBP4Q8N3X1 1017 aaPredicted RBP11.55□□□□□ -0.56
PUDP-205ENST00000498474 TSR3Q9UJK0 312 aaKnown RBP11.55□□□□□ -0.56
PUDP-205ENST00000498474 PSME1Q06323 249 aa11.54□□□□□ -0.56
PUDP-205ENST00000498474 SIN3AQ96ST3 1273 aa11.54□□□□□ -0.56
PUDP-205ENST00000498474 BCL9LQ86UU0 1499 aa11.53□□□□□ -0.56
PUDP-205ENST00000498474 WASLO00401 505 aaPredicted RBP11.53□□□□□ -0.56
PUDP-205ENST00000498474 SAMD7Q7Z3H4 446 aa11.53□□□□□ -0.56
PUDP-205ENST00000498474 TATDN2Q93075 761 aa11.53□□□□□ -0.56
PUDP-205ENST00000498474 TRPC5Q9UL62 973 aaPredicted RBP11.53□□□□□ -0.56
PUDP-205ENST00000498474 ADGRB2O60241 1585 aa11.53□□□□□ -0.56
PUDP-205ENST00000498474 ATRNO75882 1429 aa11.52□□□□□ -0.56
PUDP-205ENST00000498474 TNS3Q68CZ2 1445 aa11.52□□□□□ -0.56
PUDP-205ENST00000498474 CDK12Q9NYV4 1490 aaPredicted RBP11.52□□□□□ -0.56
PUDP-205ENST00000498474 MLLT3P42568 568 aaPredicted RBP11.52□□□□□ -0.57
PUDP-205ENST00000498474 KCNV2Q8TDN2 545 aa11.52□□□□□ -0.57
PUDP-205ENST00000498474 NPDC1Q9NQX5 325 aaPredicted RBP11.52□□□□□ -0.57
PUDP-205ENST00000498474 PNMA3Q9UL41 463 aa11.52□□□□□ -0.57
PUDP-205ENST00000498474 ABCA3Q99758 1704 aa11.52□□□□□ -0.57
PUDP-205ENST00000498474 HAP1P54257 671 aaPredicted RBP11.51□□□□□ -0.57
PUDP-205ENST00000498474 NYAP1Q6ZVC0 841 aa11.51□□□□□ -0.57
PUDP-205ENST00000498474 TRPM3Q9HCF6 1732 aaPredicted RBP11.51□□□□□ -0.57
PUDP-205ENST00000498474 NEUROD1Q13562 356 aa11.5□□□□□ -0.57
PUDP-205ENST00000498474 NUDT18Q6ZVK8 323 aa11.5□□□□□ -0.57
PUDP-205ENST00000498474 ANKARQ7Z5J8 1434 aa11.5□□□□□ -0.57
PUDP-205ENST00000498474 TULP4Q9NRJ4 1543 aa11.5□□□□□ -0.57
PUDP-205ENST00000498474 NGDNQ8NEJ9 315 aaKnown RBP11.49□□□□□ -0.57
PUDP-205ENST00000498474 L3MBTL2Q969R5 705 aa11.49□□□□□ -0.57
PUDP-205ENST00000498474 NUDT16Q96DE0 195 aaKnown RBP11.49□□□□□ -0.57
PUDP-205ENST00000498474 CDK19Q9BWU1 502 aa11.49□□□□□ -0.57
PUDP-205ENST00000498474 SBNO1A3KN83 1393 aa11.49□□□□□ -0.57
PUDP-205ENST00000498474 SRCAPQ6ZRS2 3230 aa11.48□□□□□ -0.57
PUDP-205ENST00000498474 PPP4CP60510 307 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms