RNA–Protein interactions for RNA: ENST00000498284.1

PTPRK-215, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 524 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-215ENST00000498284 MKRN1Q9UHC7 482 aaKnown RBP8.62□□□□□ -1.03
PTPRK-215ENST00000498284 NOD1Q9Y239 953 aa8.62□□□□□ -1.03
PTPRK-215ENST00000498284 AVPP01185 164 aa8.61□□□□□ -1.03
PTPRK-215ENST00000498284 ADD1P35611 737 aaKnown RBP8.61□□□□□ -1.03
PTPRK-215ENST00000498284 CBLBQ13191 982 aa8.61□□□□□ -1.03
PTPRK-215ENST00000498284 ZNF787Q6DD87 383 aa8.61□□□□□ -1.03
PTPRK-215ENST00000498284 VRTNQ9H8Y1 702 aa8.61□□□□□ -1.03
PTPRK-215ENST00000498284 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.6□□□□□ -1.03
PTPRK-215ENST00000498284 ATP5J2-PTCD1G3V325 749 aa8.6□□□□□ -1.03
PTPRK-215ENST00000498284 SRPK2P78362 688 aaKnown RBP8.6□□□□□ -1.03
PTPRK-215ENST00000498284 PBXIP1Q96AQ6 731 aa8.6□□□□□ -1.03
PTPRK-215ENST00000498284 OSBPL3Q9H4L5 887 aa8.6□□□□□ -1.03
PTPRK-215ENST00000498284 CAPN5O15484 640 aaPredicted RBP8.59□□□□□ -1.03
PTPRK-215ENST00000498284 CDCA8Q53HL2 280 aa8.59□□□□□ -1.03
PTPRK-215ENST00000498284 TRIM50Q86XT4 487 aa8.59□□□□□ -1.03
PTPRK-215ENST00000498284 GTF2IP78347 998 aa8.58□□□□□ -1.04
PTPRK-215ENST00000498284 Q6ZVU0 165 aa8.58□□□□□ -1.04
PTPRK-215ENST00000498284 PCDHGA11Q9Y5H2 935 aa8.58□□□□□ -1.04
PTPRK-215ENST00000498284 PPP1R15AO75807 674 aaPredicted RBP8.57□□□□□ -1.04
PTPRK-215ENST00000498284 ADH1AP07327 375 aa8.57□□□□□ -1.04
PTPRK-215ENST00000498284 RASA1P20936 1047 aa8.57□□□□□ -1.04
PTPRK-215ENST00000498284 SMCPP49901 116 aaPredicted RBP8.57□□□□□ -1.04
PTPRK-215ENST00000498284 CTC1Q2NKJ3 1217 aa8.57□□□□□ -1.04
PTPRK-215ENST00000498284 CYP2U1Q7Z449 544 aa8.57□□□□□ -1.04
PTPRK-215ENST00000498284 OGFOD1Q8N543 542 aa8.57□□□□□ -1.04
PTPRK-215ENST00000498284 ATP1A2P50993 1020 aa8.56□□□□□ -1.04
PTPRK-215ENST00000498284 CLDN10P78369 228 aa8.56□□□□□ -1.04
PTPRK-215ENST00000498284 LARP1Q6PKG0 1096 aaKnown RBP8.56□□□□□ -1.04
PTPRK-215ENST00000498284 MEIOBQ8N635 442 aa8.56□□□□□ -1.04
PTPRK-215ENST00000498284 ZNF775Q96BV0 537 aaPredicted RBP8.56□□□□□ -1.04
PTPRK-215ENST00000498284 AGBL1Q96MI9 1066 aa8.56□□□□□ -1.04
PTPRK-215ENST00000498284 DNAAF2Q9NVR5 837 aaKnown RBP8.56□□□□□ -1.04
PTPRK-215ENST00000498284 ZBTB7BO15156 539 aaPredicted RBP8.55□□□□□ -1.04
PTPRK-215ENST00000498284 AXIN1O15169 862 aa8.55□□□□□ -1.04
PTPRK-215ENST00000498284 PSME1Q06323 249 aa8.55□□□□□ -1.04
PTPRK-215ENST00000498284 CRTC2Q53ET0 693 aaPredicted RBP8.55□□□□□ -1.04
PTPRK-215ENST00000498284 CRIPAKQ8N1N5 446 aa8.55□□□□□ -1.04
PTPRK-215ENST00000498284 KDF1Q8NAX2 398 aaPredicted RBP8.55□□□□□ -1.04
PTPRK-215ENST00000498284 FAM196BA6NMK8 535 aa8.54□□□□□ -1.04
PTPRK-215ENST00000498284 POTECB2RU33 542 aa8.54□□□□□ -1.04
PTPRK-215ENST00000498284 GNRH1P01148 92 aa8.54□□□□□ -1.04
PTPRK-215ENST00000498284 RELBQ01201 579 aa8.54□□□□□ -1.04
PTPRK-215ENST00000498284 PTK7Q13308 1070 aa8.54□□□□□ -1.04
PTPRK-215ENST00000498284 LARGE2Q8N3Y3 721 aa8.54□□□□□ -1.04
PTPRK-215ENST00000498284 ZNF594Q96JF6 807 aaPredicted RBP8.54□□□□□ -1.04
PTPRK-215ENST00000498284 USP17L15C9J2P7 530 aa8.53□□□□□ -1.04
PTPRK-215ENST00000498284 USP17L10C9JJH3 530 aa8.53□□□□□ -1.04
PTPRK-215ENST00000498284 USP17L13C9JLJ4 530 aa8.53□□□□□ -1.04
PTPRK-215ENST00000498284 USP17L12C9JPN9 530 aa8.53□□□□□ -1.04
PTPRK-215ENST00000498284 USP17L11C9JVI0 530 aa8.53□□□□□ -1.04
PTPRK-215ENST00000498284 USP17L21D6R901 530 aa8.53□□□□□ -1.04
PTPRK-215ENST00000498284 USP17L18D6R9N7 530 aa8.53□□□□□ -1.04
PTPRK-215ENST00000498284 USP17L22D6RA61 530 aa8.53□□□□□ -1.04
PTPRK-215ENST00000498284 USP17L17D6RBQ6 530 aa8.53□□□□□ -1.04
PTPRK-215ENST00000498284 USP17L19D6RCP7 530 aa8.53□□□□□ -1.04
PTPRK-215ENST00000498284 USP17L20D6RJB6 530 aa8.53□□□□□ -1.04
PTPRK-215ENST00000498284 ATG7O95352 703 aa8.53□□□□□ -1.04
PTPRK-215ENST00000498284 PTGIRP43119 386 aa8.53□□□□□ -1.04
PTPRK-215ENST00000498284 USP17L24Q0WX57 530 aa8.53□□□□□ -1.04
PTPRK-215ENST00000498284 TSEN34Q9BSV6 310 aaKnown RBP8.53□□□□□ -1.04
PTPRK-215ENST00000498284 KIAA1024Q9UPX6 916 aa8.53□□□□□ -1.04
PTPRK-215ENST00000498284 ACIN1Q9UKV3 1341 aaKnown RBP8.53□□□□□ -1.04
PTPRK-215ENST00000498284 ST8SIA5O15466 376 aa8.52□□□□□ -1.05
PTPRK-215ENST00000498284 UPP2O95045 317 aa8.52□□□□□ -1.05
PTPRK-215ENST00000498284 STAU1O95793 577 aaKnown RBP8.52□□□□□ -1.05
PTPRK-215ENST00000498284 CCDC102BQ68D86 513 aa8.52□□□□□ -1.05
PTPRK-215ENST00000498284 TPCN2Q8NHX9 752 aa8.52□□□□□ -1.05
PTPRK-215ENST00000498284 ZNF395Q9H8N7 513 aaPredicted RBP8.52□□□□□ -1.05
PTPRK-215ENST00000498284 ARHGEF10LQ9HCE6 1279 aa8.52□□□□□ -1.05
PTPRK-215ENST00000498284 AAASQ9NRG9 546 aa8.52□□□□□ -1.05
PTPRK-215ENST00000498284 A0A1W2PRU2 124 aa8.51□□□□□ -1.05
PTPRK-215ENST00000498284 BMP1P13497 986 aa8.51□□□□□ -1.05
PTPRK-215ENST00000498284 SCNN1DP51172 638 aa8.51□□□□□ -1.05
PTPRK-215ENST00000498284 MRPL14Q6P1L8 145 aaKnown RBP8.51□□□□□ -1.05
PTPRK-215ENST00000498284 ANKMY2Q8IV38 441 aa8.51□□□□□ -1.05
PTPRK-215ENST00000498284 SIX5Q8N196 739 aa8.51□□□□□ -1.05
PTPRK-215ENST00000498284 LINC00528Q8N1L1 170 aa8.51□□□□□ -1.05
PTPRK-215ENST00000498284 RBM19Q9Y4C8 960 aaKnown RBP8.51□□□□□ -1.05
PTPRK-215ENST00000498284 GDF10P55107 478 aa8.5□□□□□ -1.05
PTPRK-215ENST00000498284 DPYDQ12882 1025 aa8.5□□□□□ -1.05
PTPRK-215ENST00000498284 ELOAQ14241 798 aaKnown RBP8.5□□□□□ -1.05
PTPRK-215ENST00000498284 ESCO1Q5FWF5 840 aa8.5□□□□□ -1.05
PTPRK-215ENST00000498284 ETNK1Q9HBU6 452 aa8.5□□□□□ -1.05
PTPRK-215ENST00000498284 RAB6BQ9NRW1 208 aa8.5□□□□□ -1.05
PTPRK-215ENST00000498284 NOVA2Q9UNW9 492 aaKnown RBP8.5□□□□□ -1.05
PTPRK-215ENST00000498284 TMEM229AB2RXF0 380 aa8.49□□□□□ -1.05
PTPRK-215ENST00000498284 DKK1O94907 266 aa8.49□□□□□ -1.05
PTPRK-215ENST00000498284 BMP2P12643 396 aa8.49□□□□□ -1.05
PTPRK-215ENST00000498284 CLN3Q13286 438 aa8.49□□□□□ -1.05
PTPRK-215ENST00000498284 SCARF1Q14162 830 aa8.49□□□□□ -1.05
PTPRK-215ENST00000498284 C6orf118Q5T5N4 469 aa8.49□□□□□ -1.05
PTPRK-215ENST00000498284 TRIM46Q7Z4K8 759 aa8.49□□□□□ -1.05
PTPRK-215ENST00000498284 XAGE2Q96GT9 111 aa8.49□□□□□ -1.05
PTPRK-215ENST00000498284 MEN1O00255 615 aa8.48□□□□□ -1.05
PTPRK-215ENST00000498284 WASLO00401 505 aaPredicted RBP8.48□□□□□ -1.05
PTPRK-215ENST00000498284 SPINT1O43278 529 aa8.48□□□□□ -1.05
PTPRK-215ENST00000498284 IL2RAP01589 272 aa8.48□□□□□ -1.05
PTPRK-215ENST00000498284 INHAP05111 366 aa8.48□□□□□ -1.05
PTPRK-215ENST00000498284 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.48□□□□□ -1.05
PTPRK-215ENST00000498284 FAM200AQ8TCP9 573 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms