RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 KIFC2Q96AC6 838 aa1.96□□□□□ -2.1
XRN1-214ENST00000498077 NUTM2FA1L443 756 aa1.95□□□□□ -2.1
XRN1-214ENST00000498077 KIF3CO14782 793 aa1.95□□□□□ -2.1
XRN1-214ENST00000498077 PROCP04070 461 aa1.95□□□□□ -2.1
XRN1-214ENST00000498077 CCDC70Q6NSX1 233 aa1.95□□□□□ -2.1
XRN1-214ENST00000498077 ERMP1Q7Z2K6 904 aa1.95□□□□□ -2.1
XRN1-214ENST00000498077 INO80BQ9C086 356 aaPredicted RBP1.95□□□□□ -2.1
XRN1-214ENST00000498077 KIF20AO95235 890 aa1.95□□□□□ -2.1
XRN1-214ENST00000498077 HSPA4P34932 840 aa1.95□□□□□ -2.1
XRN1-214ENST00000498077 FOSBP53539 338 aa1.95□□□□□ -2.1
XRN1-214ENST00000498077 CCDC157Q569K6 752 aa1.95□□□□□ -2.1
XRN1-214ENST00000498077 KIAA1211Q6ZU35 1233 aa1.95□□□□□ -2.1
XRN1-214ENST00000498077 CLASRPQ8N2M8 674 aaKnown RBP1.95□□□□□ -2.1
XRN1-214ENST00000498077 MLPHQ9BV36 600 aaPredicted RBP1.95□□□□□ -2.1
XRN1-214ENST00000498077 PTCH1Q13635 1447 aa1.95□□□□□ -2.1
XRN1-214ENST00000498077 COBLO75128 1261 aa1.95□□□□□ -2.1
XRN1-214ENST00000498077 GALNT6Q8NCL4 622 aa1.95□□□□□ -2.1
XRN1-214ENST00000498077 SENP2Q9HC62 589 aa1.95□□□□□ -2.1
XRN1-214ENST00000498077 COL16A1Q07092 1604 aaPredicted RBP1.95□□□□□ -2.1
XRN1-214ENST00000498077 APBB1O00213 710 aa1.95□□□□□ -2.1
XRN1-214ENST00000498077 DNAJB2P25686 324 aa1.95□□□□□ -2.1
XRN1-214ENST00000498077 GTF2E1P29083 439 aaPredicted RBP1.95□□□□□ -2.1
XRN1-214ENST00000498077 USP46P62068 366 aa1.95□□□□□ -2.1
XRN1-214ENST00000498077 SHQ1Q6PI26 577 aaKnown RBP1.95□□□□□ -2.1
XRN1-214ENST00000498077 ZDHHC14Q8IZN3 488 aa1.95□□□□□ -2.1
XRN1-214ENST00000498077 JADE2Q9NQC1 790 aa1.95□□□□□ -2.1
XRN1-214ENST00000498077 INTS13Q9NVM9 706 aa1.95□□□□□ -2.1
XRN1-214ENST00000498077 KIAA1468Q9P260 1216 aa1.95□□□□□ -2.1
XRN1-214ENST00000498077 MROH2BQ7Z745 1585 aa1.95□□□□□ -2.1
XRN1-214ENST00000498077 ADCY9O60503 1353 aa1.95□□□□□ -2.1
XRN1-214ENST00000498077 PPM1GO15355 546 aaPredicted RBP1.94□□□□□ -2.1
XRN1-214ENST00000498077 ARMC2Q8NEN0 867 aa1.94□□□□□ -2.1
XRN1-214ENST00000498077 SLC16A10Q8TF71 515 aa1.94□□□□□ -2.1
XRN1-214ENST00000498077 CITED4Q96RK1 184 aa1.94□□□□□ -2.1
XRN1-214ENST00000498077 CRISPLD2Q9H0B8 497 aa1.94□□□□□ -2.1
XRN1-214ENST00000498077 NCDNQ9UBB6 729 aa1.94□□□□□ -2.1
XRN1-214ENST00000498077 A0A1W2PQJ5 194 aa1.94□□□□□ -2.1
XRN1-214ENST00000498077 NRG2O14511 850 aaPredicted RBP1.94□□□□□ -2.1
XRN1-214ENST00000498077 PPP1R15AO75807 674 aaPredicted RBP1.94□□□□□ -2.1
XRN1-214ENST00000498077 RPIAP49247 311 aa1.94□□□□□ -2.1
XRN1-214ENST00000498077 DSG2Q14126 1118 aa1.94□□□□□ -2.1
XRN1-214ENST00000498077 SERBP1Q8NC51 408 aaKnown RBP eCLIP1.94□□□□□ -2.1
XRN1-214ENST00000498077 TTC16Q8NEE8 873 aa1.94□□□□□ -2.1
XRN1-214ENST00000498077 MS4A4AQ96JQ5 239 aa1.94□□□□□ -2.1
XRN1-214ENST00000498077 TNIP3Q96KP6 325 aa1.94□□□□□ -2.1
XRN1-214ENST00000498077 FAM193BQ96PV7 902 aaPredicted RBP1.94□□□□□ -2.1
XRN1-214ENST00000498077 ARHGEF28Q8N1W1 1705 aaKnown RBP1.94□□□□□ -2.1
XRN1-214ENST00000498077 ATRNO75882 1429 aa1.94□□□□□ -2.1
XRN1-214ENST00000498077 C9orf84Q5VXU9 1444 aa1.94□□□□□ -2.1
XRN1-214ENST00000498077 A0A0G2JS52 829 aa1.94□□□□□ -2.1
XRN1-214ENST00000498077 GRXCR2A6NFK2 248 aa1.94□□□□□ -2.1
XRN1-214ENST00000498077 C11orf95C9JLR9 678 aaPredicted RBP1.94□□□□□ -2.1
XRN1-214ENST00000498077 FMNL1O95466 1100 aaPredicted RBP1.94□□□□□ -2.1
XRN1-214ENST00000498077 MATR3P43243 847 aaKnown RBP eCLIP1.94□□□□□ -2.13e-9■■■■■ 33.3
XRN1-214ENST00000498077 NR2C2APQ86WQ0 139 aa1.94□□□□□ -2.1
XRN1-214ENST00000498077 TATDN2Q93075 761 aa1.94□□□□□ -2.1
XRN1-214ENST00000498077 DIS3Q9Y2L1 958 aaKnown RBP1.94□□□□□ -2.1
XRN1-214ENST00000498077 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.94□□□□□ -2.1
XRN1-214ENST00000498077 FAM135AQ9P2D6 1515 aa1.94□□□□□ -2.1
XRN1-214ENST00000498077 FOXC1Q12948 553 aa1.94□□□□□ -2.1
XRN1-214ENST00000498077 THSD4Q6ZMP0 1018 aa1.94□□□□□ -2.1
XRN1-214ENST00000498077 WWC1Q8IX03 1113 aa1.94□□□□□ -2.1
XRN1-214ENST00000498077 CCNL2Q96S94 520 aaPredicted RBP1.94□□□□□ -2.1
XRN1-214ENST00000498077 V9GY48 417 aaPredicted RBP1.94□□□□□ -2.1
XRN1-214ENST00000498077 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.94□□□□□ -2.1
XRN1-214ENST00000498077 RREB1Q92766 1687 aa1.94□□□□□ -2.1
XRN1-214ENST00000498077 AFF2P51816 1311 aa1.94□□□□□ -2.1
XRN1-214ENST00000498077 ATG7O95352 703 aa1.94□□□□□ -2.1
XRN1-214ENST00000498077 SNRNP35Q16560 246 aaKnown RBP1.94□□□□□ -2.1
XRN1-214ENST00000498077 DALRD3Q5D0E6 543 aaKnown RBP1.94□□□□□ -2.1
XRN1-214ENST00000498077 C6orf132Q5T0Z8 1188 aa1.94□□□□□ -2.1
XRN1-214ENST00000498077 SPOUT1Q5T280 376 aaKnown RBP1.94□□□□□ -2.1
XRN1-214ENST00000498077 MMS19Q96T76 1030 aa1.94□□□□□ -2.1
XRN1-214ENST00000498077 CWC22Q9HCG8 908 aaKnown RBP1.94□□□□□ -2.1
XRN1-214ENST00000498077 SSU72Q9NP77 194 aaKnown RBP1.94□□□□□ -2.1
XRN1-214ENST00000498077 CUL7Q14999 1698 aa1.93□□□□□ -2.1
XRN1-214ENST00000498077 ROBO1Q9Y6N7 1651 aa1.93□□□□□ -2.1
XRN1-214ENST00000498077 PXDNLA1KZ92 1463 aa1.93□□□□□ -2.1
XRN1-214ENST00000498077 SOWAHBA6NEL2 793 aa1.93□□□□□ -2.1
XRN1-214ENST00000498077 ZBBXA8MT70 800 aa1.93□□□□□ -2.1
XRN1-214ENST00000498077 FXR1P51114 621 aaKnown RBP eCLIP1.93□□□□□ -2.1
XRN1-214ENST00000498077 PKDCCQ504Y2 493 aa1.93□□□□□ -2.1
XRN1-214ENST00000498077 DAAM2Q86T65 1068 aa1.93□□□□□ -2.1
XRN1-214ENST00000498077 VSIG10Q8N0Z9 540 aa1.93□□□□□ -2.1
XRN1-214ENST00000498077 EIF4ENIF1Q9NRA8 985 aaKnown RBP1.93□□□□□ -2.1
XRN1-214ENST00000498077 BAIAP2L1Q9UHR4 511 aa1.93□□□□□ -2.1
XRN1-214ENST00000498077 PCDHB3Q9Y5E6 796 aa1.93□□□□□ -2.1
XRN1-214ENST00000498077 FOXN1O15353 648 aa1.93□□□□□ -2.1
XRN1-214ENST00000498077 ITGB8P26012 769 aa1.93□□□□□ -2.1
XRN1-214ENST00000498077 EN1Q05925 392 aaPredicted RBP1.93□□□□□ -2.1
XRN1-214ENST00000498077 CYP4X1Q8N118 509 aa1.93□□□□□ -2.1
XRN1-214ENST00000498077 QTRT2Q9H974 415 aaKnown RBP1.93□□□□□ -2.1
XRN1-214ENST00000498077 SLIT2O94813 1529 aa1.93□□□□□ -2.1
XRN1-214ENST00000498077 TET3O43151 1660 aa1.93□□□□□ -2.1
XRN1-214ENST00000498077 C3P01024 1663 aa1.93□□□□□ -2.1
XRN1-214ENST00000498077 FRMPD1Q5SYB0 1578 aa1.93□□□□□ -2.1
XRN1-214ENST00000498077 LRP6O75581 1613 aa1.93□□□□□ -2.1
XRN1-214ENST00000498077 DAPK3O43293 454 aa1.93□□□□□ -2.1
XRN1-214ENST00000498077 GFRA3O60609 400 aa1.93□□□□□ -2.1
XRN1-214ENST00000498077 POTEJP0CG39 1038 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 149.1 ms