RNA–Protein interactions for RNA: ENST00000498034.5

LMBR1-219, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-219ENST00000498034 EIF4G2P78344 907 aaKnown RBP eCLIP28.18■■■□□ 2.1
LMBR1-219ENST00000498034 FLT4P35916 1363 aa28.18■■■□□ 2.1
LMBR1-219ENST00000498034 HSPA5P11021 654 aaKnown RBP28.17■■■□□ 2.1
LMBR1-219ENST00000498034 PPP1R1BQ9UD71 204 aaPredicted RBP28.17■■■□□ 2.1
LMBR1-219ENST00000498034 EMILIN1Q9Y6C2 1016 aa28.17■■■□□ 2.1
LMBR1-219ENST00000498034 KIF24Q5T7B8 1368 aa28.15■■■□□ 2.1
LMBR1-219ENST00000498034 ZBTB7AO95365 584 aa28.14■■■□□ 2.1
LMBR1-219ENST00000498034 PRIM1P49642 420 aaKnown RBP28.14■■■□□ 2.1
LMBR1-219ENST00000498034 RAPGEF4Q8WZA2 1011 aa28.14■■■□□ 2.1
LMBR1-219ENST00000498034 SYTL4Q96C24 671 aaPredicted RBP28.14■■■□□ 2.1
LMBR1-219ENST00000498034 DOT1LQ8TEK3 1739 aa28.13■■■□□ 2.09
LMBR1-219ENST00000498034 CGNL1Q0VF96 1302 aa28.13■■■□□ 2.09
LMBR1-219ENST00000498034 LRRC4BQ9NT99 713 aa28.12■■■□□ 2.09
LMBR1-219ENST00000498034 PAPPAQ13219 1627 aa28.11■■■□□ 2.09
LMBR1-219ENST00000498034 PPM1GO15355 546 aaPredicted RBP28.11■■■□□ 2.09
LMBR1-219ENST00000498034 TATP17735 454 aaPredicted RBP28.11■■■□□ 2.09
LMBR1-219ENST00000498034 ATF5Q9Y2D1 282 aaPredicted RBP28.1■■■□□ 2.09
LMBR1-219ENST00000498034 ZNF827Q17R98 1081 aa28.08■■■□□ 2.09
LMBR1-219ENST00000498034 MAP2P11137 1827 aaKnown RBP28.08■■■□□ 2.09
LMBR1-219ENST00000498034 NSD2O96028 1365 aa28.08■■■□□ 2.09
LMBR1-219ENST00000498034 ANKRD26Q9UPS8 1709 aa28.06■■■□□ 2.08
LMBR1-219ENST00000498034 PTGER2P43116 358 aa28.05■■■□□ 2.08
LMBR1-219ENST00000498034 KCNQ4P56696 695 aa28.05■■■□□ 2.08
LMBR1-219ENST00000498034 POLKQ9UBT6 870 aa28.05■■■□□ 2.08
LMBR1-219ENST00000498034 WASHC2AQ641Q2 1341 aa28.04■■■□□ 2.08
LMBR1-219ENST00000498034 SLC27A3Q5K4L6 730 aa28.04■■■□□ 2.08
LMBR1-219ENST00000498034 PANK3Q9H999 370 aa28.04■■■□□ 2.08
LMBR1-219ENST00000498034 TNNT2P45379 298 aaPredicted RBP28.03■■■□□ 2.08
LMBR1-219ENST00000498034 PCDH11XQ9BZA7 1347 aa28.02■■■□□ 2.08
LMBR1-219ENST00000498034 PCDH11YQ9BZA8 1340 aa28.02■■■□□ 2.08
LMBR1-219ENST00000498034 MTFR1LQ9H019 292 aa28.02■■■□□ 2.08
LMBR1-219ENST00000498034 LY75O60449 1722 aa28.01■■■□□ 2.07
LMBR1-219ENST00000498034 AKT1S1Q96B36 256 aa28.01■■■□□ 2.07
LMBR1-219ENST00000498034 CYP27B1O15528 508 aa28■■■□□ 2.07
LMBR1-219ENST00000498034 EYA1Q99502 592 aa28■■■□□ 2.07
LMBR1-219ENST00000498034 NCAPD2Q15021 1401 aa28■■■□□ 2.07
LMBR1-219ENST00000498034 SGIP1Q9BQI5 828 aa27.97■■■□□ 2.07
LMBR1-219ENST00000498034 PKD1L3Q7Z443 1732 aa27.96■■■□□ 2.07
LMBR1-219ENST00000498034 CCNL1Q9UK58 526 aaPredicted RBP27.96■■■□□ 2.07
LMBR1-219ENST00000498034 EIF4A2Q14240 407 aaKnown RBP27.94■■■□□ 2.06
LMBR1-219ENST00000498034 QSER1Q2KHR3 1735 aa27.93■■■□□ 2.06
LMBR1-219ENST00000498034 MPRIPQ6WCQ1 1025 aa27.93■■■□□ 2.06
LMBR1-219ENST00000498034 TFCP2L1Q9NZI6 479 aa27.93■■■□□ 2.06
LMBR1-219ENST00000498034 PNPLA7Q6ZV29 1317 aa27.92■■■□□ 2.06
LMBR1-219ENST00000498034 TOGARAM1Q9Y4F4 1720 aa27.92■■■□□ 2.06
LMBR1-219ENST00000498034 TUBGCP6Q96RT7 1819 aa27.92■■■□□ 2.06
LMBR1-219ENST00000498034 SPG7Q9UQ90 795 aa27.92■■■□□ 2.06
LMBR1-219ENST00000498034 FHDC1Q9C0D6 1143 aaPredicted RBP27.91■■■□□ 2.06
LMBR1-219ENST00000498034 DCAF8L1A6NGE4 600 aa27.9■■■□□ 2.06
LMBR1-219ENST00000498034 ITGB4P16144 1822 aa27.9■■■□□ 2.06
LMBR1-219ENST00000498034 ARXQ96QS3 562 aa27.89■■■□□ 2.06
LMBR1-219ENST00000498034 SYT17Q9BSW7 474 aa27.89■■■□□ 2.06
LMBR1-219ENST00000498034 NKX1-1Q15270 411 aaPredicted RBP27.88■■■□□ 2.05
LMBR1-219ENST00000498034 MORC1Q86VD1 984 aa27.88■■■□□ 2.05
LMBR1-219ENST00000498034 SLC16A10Q8TF71 515 aa27.88■■■□□ 2.05
LMBR1-219ENST00000498034 PALLDQ8WX93 1383 aa27.87■■■□□ 2.05
LMBR1-219ENST00000498034 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.87■■■□□ 2.052e-7■□□□□ 9.4
LMBR1-219ENST00000498034 KNSTRNQ9Y448 316 aa27.86■■■□□ 2.05
LMBR1-219ENST00000498034 PIGBQ92521 554 aa27.85■■■□□ 2.05
LMBR1-219ENST00000498034 KIF7Q2M1P5 1343 aa27.84■■■□□ 2.05
LMBR1-219ENST00000498034 PHKG2P15735 406 aa27.83■■■□□ 2.05
LMBR1-219ENST00000498034 IFNL2Q8IZJ0 200 aa27.83■■■□□ 2.05
LMBR1-219ENST00000498034 C5P01031 1676 aa27.83■■■□□ 2.05
LMBR1-219ENST00000498034 IGSF1Q8N6C5 1336 aa27.83■■■□□ 2.05
LMBR1-219ENST00000498034 YY1P25490 414 aa27.82■■■□□ 2.04
LMBR1-219ENST00000498034 SMARCC1Q92922 1105 aaPredicted RBP27.82■■■□□ 2.04
LMBR1-219ENST00000498034 COL23A1Q86Y22 540 aaPredicted RBP27.81■■■□□ 2.04
LMBR1-219ENST00000498034 COL24A1Q17RW2 1714 aa27.81■■■□□ 2.04
LMBR1-219ENST00000498034 TAF1LQ8IZX4 1826 aa27.81■■■□□ 2.04
LMBR1-219ENST00000498034 MSH5O43196 834 aa27.8■■■□□ 2.04
LMBR1-219ENST00000498034 POLD1P28340 1107 aa27.79■■■□□ 2.04
LMBR1-219ENST00000498034 AMER1Q5JTC6 1135 aaPredicted RBP27.78■■■□□ 2.04
LMBR1-219ENST00000498034 TMOD3Q9NYL9 352 aa27.78■■■□□ 2.04
LMBR1-219ENST00000498034 MAP3K5Q99683 1374 aa27.76■■■□□ 2.03
LMBR1-219ENST00000498034 KLHL34Q8N239 644 aa27.76■■■□□ 2.03
LMBR1-219ENST00000498034 ASAP1Q9ULH1 1129 aa27.75■■■□□ 2.03
LMBR1-219ENST00000498034 PLEKHG2Q9H7P9 1386 aa27.74■■■□□ 2.03
LMBR1-219ENST00000498034 AEBP1Q8IUX7 1158 aa27.74■■■□□ 2.03
LMBR1-219ENST00000498034 C4BP0C0L5 1744 aa27.74■■■□□ 2.03
LMBR1-219ENST00000498034 HMGB2P26583 209 aaKnown RBP27.73■■■□□ 2.03
LMBR1-219ENST00000498034 PLEKHO1Q53GL0 409 aaPredicted RBP27.73■■■□□ 2.03
LMBR1-219ENST00000498034 LOC102724428A0A0B4J2F2 783 aa27.72■■■□□ 2.03
LMBR1-219ENST00000498034 SIK1P57059 783 aa27.72■■■□□ 2.03
LMBR1-219ENST00000498034 MSL1Q68DK7 614 aa27.72■■■□□ 2.03
LMBR1-219ENST00000498034 AK7Q96M32 723 aa27.71■■■□□ 2.03
LMBR1-219ENST00000498034 PER1O15534 1290 aaPredicted RBP27.7■■■□□ 2.02
LMBR1-219ENST00000498034 ZNF530Q6P9A1 599 aaPredicted RBP27.7■■■□□ 2.02
LMBR1-219ENST00000498034 SMIM5Q71RC9 77 aa27.7■■■□□ 2.02
LMBR1-219ENST00000498034 AMIGO3Q86WK7 504 aa27.7■■■□□ 2.02
LMBR1-219ENST00000498034 FLAD1Q8NFF5 587 aa27.7■■■□□ 2.02
LMBR1-219ENST00000498034 ATG3Q9NT62 314 aa27.7■■■□□ 2.02
LMBR1-219ENST00000498034 IL13P35225 146 aa27.69■■■□□ 2.02
LMBR1-219ENST00000498034 SULT6B1Q6IMI4 303 aa27.69■■■□□ 2.02
LMBR1-219ENST00000498034 LINC00116Q8NCU8 138 aa27.69■■■□□ 2.02
LMBR1-219ENST00000498034 AMOTQ4VCS5 1084 aa27.68■■■□□ 2.02
LMBR1-219ENST00000498034 DCAF5Q96JK2 942 aa27.68■■■□□ 2.02
LMBR1-219ENST00000498034 ERVV-2B6SEH9 535 aa27.67■■■□□ 2.02
LMBR1-219ENST00000498034 HSP90AB1P08238 724 aaKnown RBP27.67■■■□□ 2.02
LMBR1-219ENST00000498034 ITPK1Q13572 414 aa27.67■■■□□ 2.02
LMBR1-219ENST00000498034 UBR3Q6ZT12 1888 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms