RNA–Protein interactions for RNA: ENST00000498015.2

NEB-217, Transcript of nebulin, humanhuman

TSL 5

Gene NEB, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-217ENST00000498015 RGPD2P0DJD1 1756 aa10.07□□□□□ -0.8
NEB-217ENST00000498015 CACNB1Q02641 598 aaPredicted RBP10.07□□□□□ -0.8
NEB-217ENST00000498015 HSP90AB2PQ58FF8 381 aa10.07□□□□□ -0.8
NEB-217ENST00000498015 SYTL4Q96C24 671 aaPredicted RBP10.07□□□□□ -0.8
NEB-217ENST00000498015 ATF5Q9Y2D1 282 aaPredicted RBP10.07□□□□□ -0.8
NEB-217ENST00000498015 BTAF1O14981 1849 aa10.06□□□□□ -0.8
NEB-217ENST00000498015 PRIM1P49642 420 aaKnown RBP10.06□□□□□ -0.8
NEB-217ENST00000498015 RAPGEF4Q8WZA2 1011 aa10.06□□□□□ -0.8
NEB-217ENST00000498015 MEGF6O75095 1541 aa10.06□□□□□ -0.8
NEB-217ENST00000498015 SMG6Q86US8 1419 aaKnown RBP10.06□□□□□ -0.8
NEB-217ENST00000498015 KIF20BQ96Q89 1820 aa10.05□□□□□ -0.8
NEB-217ENST00000498015 INSRP06213 1382 aa10.05□□□□□ -0.8
NEB-217ENST00000498015 FLT4P35916 1363 aa10.05□□□□□ -0.8
NEB-217ENST00000498015 PPM1GO15355 546 aaPredicted RBP10.05□□□□□ -0.8
NEB-217ENST00000498015 TATP17735 454 aaPredicted RBP10.05□□□□□ -0.8
NEB-217ENST00000498015 LRRC4BQ9NT99 713 aa10.05□□□□□ -0.8
NEB-217ENST00000498015 EMILIN1Q9Y6C2 1016 aa10.05□□□□□ -0.8
NEB-217ENST00000498015 CASZ1Q86V15 1759 aa10.05□□□□□ -0.8
NEB-217ENST00000498015 MYOM1P52179 1685 aa10.04□□□□□ -0.8
NEB-217ENST00000498015 HSPA5P11021 654 aaKnown RBP10.04□□□□□ -0.8
NEB-217ENST00000498015 EIF4G2P78344 907 aaKnown RBP eCLIP10.04□□□□□ -0.8
NEB-217ENST00000498015 ZNF827Q17R98 1081 aa10.04□□□□□ -0.8
NEB-217ENST00000498015 CGNL1Q0VF96 1302 aa10.04□□□□□ -0.8
NEB-217ENST00000498015 KIF24Q5T7B8 1368 aa10.03□□□□□ -0.8
NEB-217ENST00000498015 DCAF8L1A6NGE4 600 aa10.03□□□□□ -0.8
NEB-217ENST00000498015 PTGER2P43116 358 aa10.03□□□□□ -0.8
NEB-217ENST00000498015 KCNQ4P56696 695 aa10.03□□□□□ -0.8
NEB-217ENST00000498015 SLC27A3Q5K4L6 730 aa10.03□□□□□ -0.8
NEB-217ENST00000498015 MTFR1LQ9H019 292 aa10.03□□□□□ -0.8
NEB-217ENST00000498015 AKT1S1Q96B36 256 aa10.02□□□□□ -0.81
NEB-217ENST00000498015 PAPPAQ13219 1627 aa10.01□□□□□ -0.81
NEB-217ENST00000498015 TNNT2P45379 298 aaPredicted RBP10.01□□□□□ -0.81
NEB-217ENST00000498015 DOT1LQ8TEK3 1739 aa10.01□□□□□ -0.81
NEB-217ENST00000498015 SHANK3Q9BYB0 1731 aa10.01□□□□□ -0.81
NEB-217ENST00000498015 PCDH11XQ9BZA7 1347 aa10.01□□□□□ -0.81
NEB-217ENST00000498015 PCDH11YQ9BZA8 1340 aa10.01□□□□□ -0.81
NEB-217ENST00000498015 NSD2O96028 1365 aa10.01□□□□□ -0.81
NEB-217ENST00000498015 CYP27B1O15528 508 aa10□□□□□ -0.81
NEB-217ENST00000498015 SGIP1Q9BQI5 828 aa10□□□□□ -0.81
NEB-217ENST00000498015 FHDC1Q9C0D6 1143 aaPredicted RBP10□□□□□ -0.81
NEB-217ENST00000498015 PANK3Q9H999 370 aa10□□□□□ -0.81
NEB-217ENST00000498015 TFCP2L1Q9NZI6 479 aa10□□□□□ -0.81
NEB-217ENST00000498015 POLKQ9UBT6 870 aa10□□□□□ -0.81
NEB-217ENST00000498015 CCNL1Q9UK58 526 aaPredicted RBP10□□□□□ -0.81
NEB-217ENST00000498015 WASHC2AQ641Q2 1341 aa10□□□□□ -0.81
NEB-217ENST00000498015 MAP2P11137 1827 aaKnown RBP9.99□□□□□ -0.81
NEB-217ENST00000498015 ARXQ96QS3 562 aa9.99□□□□□ -0.81
NEB-217ENST00000498015 EYA1Q99502 592 aa9.99□□□□□ -0.81
NEB-217ENST00000498015 YY1P25490 414 aa9.98□□□□□ -0.81
NEB-217ENST00000498015 MPRIPQ6WCQ1 1025 aa9.98□□□□□ -0.81
NEB-217ENST00000498015 SYT17Q9BSW7 474 aa9.98□□□□□ -0.81
NEB-217ENST00000498015 SPG7Q9UQ90 795 aa9.98□□□□□ -0.81
NEB-217ENST00000498015 PNPLA7Q6ZV29 1317 aa9.98□□□□□ -0.81
NEB-217ENST00000498015 EIF4A2Q14240 407 aaKnown RBP9.97□□□□□ -0.81
NEB-217ENST00000498015 SLC16A10Q8TF71 515 aa9.97□□□□□ -0.81
NEB-217ENST00000498015 LY75O60449 1722 aa9.96□□□□□ -0.81
NEB-217ENST00000498015 CENPBP07199 599 aaPredicted RBP9.96□□□□□ -0.82
NEB-217ENST00000498015 POLD1P28340 1107 aa9.96□□□□□ -0.82
NEB-217ENST00000498015 NKX1-1Q15270 411 aaPredicted RBP9.96□□□□□ -0.82
NEB-217ENST00000498015 MORC1Q86VD1 984 aa9.96□□□□□ -0.82
NEB-217ENST00000498015 KLHL34Q8N239 644 aa9.96□□□□□ -0.82
NEB-217ENST00000498015 PALLDQ8WX93 1383 aa9.96□□□□□ -0.82
NEB-217ENST00000498015 NCAPD2Q15021 1401 aa9.96□□□□□ -0.82
NEB-217ENST00000498015 COL23A1Q86Y22 540 aaPredicted RBP9.95□□□□□ -0.82
NEB-217ENST00000498015 PIGBQ92521 554 aa9.95□□□□□ -0.82
NEB-217ENST00000498015 SMARCC1Q92922 1105 aaPredicted RBP9.95□□□□□ -0.82
NEB-217ENST00000498015 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.95□□□□□ -0.82
NEB-217ENST00000498015 ANKRD26Q9UPS8 1709 aa9.95□□□□□ -0.82
NEB-217ENST00000498015 TUBGCP6Q96RT7 1819 aa9.94□□□□□ -0.82
NEB-217ENST00000498015 QSER1Q2KHR3 1735 aa9.94□□□□□ -0.82
NEB-217ENST00000498015 PKD1L3Q7Z443 1732 aa9.94□□□□□ -0.82
NEB-217ENST00000498015 PPP4R3CPQ6ZMV5 832 aa9.94□□□□□ -0.82
NEB-217ENST00000498015 IFNL2Q8IZJ0 200 aa9.94□□□□□ -0.82
NEB-217ENST00000498015 KNSTRNQ9Y448 316 aa9.94□□□□□ -0.82
NEB-217ENST00000498015 MAP3K5Q99683 1374 aa9.93□□□□□ -0.82
NEB-217ENST00000498015 PHKG2P15735 406 aa9.93□□□□□ -0.82
NEB-217ENST00000498015 HMGB2P26583 209 aaKnown RBP9.93□□□□□ -0.82
NEB-217ENST00000498015 HOXD11P31277 338 aaPredicted RBP9.93□□□□□ -0.82
NEB-217ENST00000498015 MSL1Q68DK7 614 aa9.93□□□□□ -0.82
NEB-217ENST00000498015 TMOD3Q9NYL9 352 aa9.93□□□□□ -0.82
NEB-217ENST00000498015 ITGB4P16144 1822 aa9.93□□□□□ -0.82
NEB-217ENST00000498015 TOGARAM1Q9Y4F4 1720 aa9.93□□□□□ -0.82
NEB-217ENST00000498015 IGSF1Q8N6C5 1336 aa9.92□□□□□ -0.82
NEB-217ENST00000498015 FLAD1Q8NFF5 587 aa9.92□□□□□ -0.82
NEB-217ENST00000498015 AK7Q96M32 723 aa9.92□□□□□ -0.82
NEB-217ENST00000498015 KIF7Q2M1P5 1343 aa9.91□□□□□ -0.82
NEB-217ENST00000498015 LOC102724428A0A0B4J2F2 783 aa9.91□□□□□ -0.82
NEB-217ENST00000498015 SIK1P57059 783 aa9.91□□□□□ -0.82
NEB-217ENST00000498015 GPR162Q16538 588 aa9.91□□□□□ -0.82
NEB-217ENST00000498015 PLEKHO1Q53GL0 409 aaPredicted RBP9.91□□□□□ -0.82
NEB-217ENST00000498015 PELP1Q8IZL8 1130 aaKnown RBP9.91□□□□□ -0.82
NEB-217ENST00000498015 ASAP1Q9ULH1 1129 aa9.91□□□□□ -0.82
NEB-217ENST00000498015 C5P01031 1676 aa9.9□□□□□ -0.82
NEB-217ENST00000498015 PHF14O94880 888 aa9.9□□□□□ -0.82
NEB-217ENST00000498015 ZNF530Q6P9A1 599 aaPredicted RBP9.9□□□□□ -0.82
NEB-217ENST00000498015 SMIM5Q71RC9 77 aa9.9□□□□□ -0.82
NEB-217ENST00000498015 AEBP1Q8IUX7 1158 aa9.9□□□□□ -0.82
NEB-217ENST00000498015 NLGN2Q8NFZ4 835 aa9.9□□□□□ -0.82
NEB-217ENST00000498015 ATG3Q9NT62 314 aa9.9□□□□□ -0.82
NEB-217ENST00000498015 TAF1LQ8IZX4 1826 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms