RNA–Protein interactions for RNA: ENST00000497758.1

MRPL55-234, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-234ENST00000497758 NCAPD2Q15021 1401 aa15.85■□□□□ 0.13
MRPL55-234ENST00000497758 SPG7Q9UQ90 795 aa15.84■□□□□ 0.13
MRPL55-234ENST00000497758 PCDH11XQ9BZA7 1347 aa15.84■□□□□ 0.13
MRPL55-234ENST00000497758 PCDH11YQ9BZA8 1340 aa15.84■□□□□ 0.13
MRPL55-234ENST00000497758 TNS1Q9HBL0 1735 aaKnown RBP15.83■□□□□ 0.13
MRPL55-234ENST00000497758 ACSBG1Q96GR2 724 aa15.83■□□□□ 0.12
MRPL55-234ENST00000497758 CFAP53Q96M91 514 aa15.83■□□□□ 0.12
MRPL55-234ENST00000497758 DIAPH1O60610 1272 aaKnown RBP15.82■□□□□ 0.12
MRPL55-234ENST00000497758 IL13P35225 146 aa15.82■□□□□ 0.12
MRPL55-234ENST00000497758 PARD3Q8TEW0 1356 aa15.81■□□□□ 0.12
MRPL55-234ENST00000497758 KCNQ2O43526 872 aa15.8■□□□□ 0.12
MRPL55-234ENST00000497758 PPP2R1AP30153 589 aa15.8■□□□□ 0.12
MRPL55-234ENST00000497758 EZH2Q15910 746 aaKnown RBP15.8■□□□□ 0.12
MRPL55-234ENST00000497758 SULT6B1Q6IMI4 303 aa15.8■□□□□ 0.12
MRPL55-234ENST00000497758 SYTL4Q96C24 671 aaPredicted RBP15.8■□□□□ 0.12
MRPL55-234ENST00000497758 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.8■□□□□ 0.12
MRPL55-234ENST00000497758 SBF2Q86WG5 1849 aa15.8■□□□□ 0.12
MRPL55-234ENST00000497758 PLEKHG2Q9H7P9 1386 aa15.79■□□□□ 0.12
MRPL55-234ENST00000497758 PTF1AQ7RTS3 328 aa15.79■□□□□ 0.12
MRPL55-234ENST00000497758 AEBP1Q8IUX7 1158 aa15.79■□□□□ 0.12
MRPL55-234ENST00000497758 CAMKK2Q96RR4 588 aa15.79■□□□□ 0.12
MRPL55-234ENST00000497758 U2SURPO15042 1029 aaKnown RBP15.78■□□□□ 0.12
MRPL55-234ENST00000497758 CYP27B1O15528 508 aa15.78■□□□□ 0.12
MRPL55-234ENST00000497758 PLEKHO1Q53GL0 409 aaPredicted RBP15.78■□□□□ 0.12
MRPL55-234ENST00000497758 KAT6BQ8WYB5 2073 aa15.78■□□□□ 0.12
MRPL55-234ENST00000497758 SHANK3Q9BYB0 1731 aa15.77■□□□□ 0.12
MRPL55-234ENST00000497758 NHSQ6T4R5 1651 aa15.77■□□□□ 0.12
MRPL55-234ENST00000497758 PLSCR1O15162 318 aa15.77■□□□□ 0.12
MRPL55-234ENST00000497758 PRIM1P49642 420 aaKnown RBP15.77■□□□□ 0.12
MRPL55-234ENST00000497758 PKD1L3Q7Z443 1732 aa15.77■□□□□ 0.11
MRPL55-234ENST00000497758 KDRP35968 1356 aa15.76■□□□□ 0.11
MRPL55-234ENST00000497758 ZNF316A6NFI3 1004 aaPredicted RBP15.76■□□□□ 0.11
MRPL55-234ENST00000497758 HMOX1P09601 288 aa15.76■□□□□ 0.11
MRPL55-234ENST00000497758 RALBP1Q15311 655 aa15.76■□□□□ 0.11
MRPL55-234ENST00000497758 AMOTQ4VCS5 1084 aa15.76■□□□□ 0.11
MRPL55-234ENST00000497758 IFNL2Q8IZJ0 200 aa15.76■□□□□ 0.11
MRPL55-234ENST00000497758 NUDCQ9Y266 331 aa15.76■□□□□ 0.11
MRPL55-234ENST00000497758 COL3A1P02461 1466 aaPredicted RBP15.76■□□□□ 0.11
MRPL55-234ENST00000497758 ZNF530Q6P9A1 599 aaPredicted RBP15.75■□□□□ 0.11
MRPL55-234ENST00000497758 PHKG2P15735 406 aa15.74■□□□□ 0.11
MRPL55-234ENST00000497758 C1orf141Q5JVX7 400 aa15.74■□□□□ 0.11
MRPL55-234ENST00000497758 HSP90AB1P08238 724 aaKnown RBP15.73■□□□□ 0.11
MRPL55-234ENST00000497758 DOT1LQ8TEK3 1739 aa15.73■□□□□ 0.11
MRPL55-234ENST00000497758 NKX1-1Q15270 411 aaPredicted RBP15.72■□□□□ 0.11
MRPL55-234ENST00000497758 NBPF14Q5TI25 921 aa15.72■□□□□ 0.11
MRPL55-234ENST00000497758 RGPD3A6NKT7 1758 aaPredicted RBP15.72■□□□□ 0.11
MRPL55-234ENST00000497758 RGPD4Q7Z3J3 1758 aa15.72■□□□□ 0.11
MRPL55-234ENST00000497758 BTAF1O14981 1849 aa15.71■□□□□ 0.11
MRPL55-234ENST00000497758 U2AF1L5P0DN76 240 aaPredicted RBP15.71■□□□□ 0.11
MRPL55-234ENST00000497758 U2AF1Q01081 240 aaKnown RBP eCLIP15.71■□□□□ 0.11
MRPL55-234ENST00000497758 TXNRD1Q16881 649 aa15.71■□□□□ 0.11
MRPL55-234ENST00000497758 MPRIPQ6WCQ1 1025 aa15.71■□□□□ 0.11
MRPL55-234ENST00000497758 RREB1Q92766 1687 aa15.7■□□□□ 0.1
MRPL55-234ENST00000497758 PSDA5PKW4 1024 aaPredicted RBP15.69■□□□□ 0.1
MRPL55-234ENST00000497758 DCAF5Q96JK2 942 aa15.69■□□□□ 0.1
MRPL55-234ENST00000497758 TMOD3Q9NYL9 352 aa15.69■□□□□ 0.1
MRPL55-234ENST00000497758 SRCAPQ6ZRS2 3230 aa15.69■□□□□ 0.1
MRPL55-234ENST00000497758 MYBBP1AQ9BQG0 1328 aaKnown RBP15.68■□□□□ 0.1
MRPL55-234ENST00000497758 R3HDM1Q15032 1099 aaKnown RBP15.68■□□□□ 0.1
MRPL55-234ENST00000497758 PROM2Q8N271 834 aa15.68■□□□□ 0.1
MRPL55-234ENST00000497758 NUP188Q5SRE5 1749 aa15.68■□□□□ 0.1
MRPL55-234ENST00000497758 AKAP4Q5JQC9 854 aa15.67■□□□□ 0.1
MRPL55-234ENST00000497758 ERVV-2B6SEH9 535 aa15.66■□□□□ 0.1
MRPL55-234ENST00000497758 PRKAR2BP31323 418 aa15.66■□□□□ 0.1
MRPL55-234ENST00000497758 SLC27A3Q5K4L6 730 aa15.66■□□□□ 0.1
MRPL55-234ENST00000497758 PIGBQ92521 554 aa15.66■□□□□ 0.1
MRPL55-234ENST00000497758 SMARCC1Q92922 1105 aaPredicted RBP15.66■□□□□ 0.1
MRPL55-234ENST00000497758 TOGARAM1Q9Y4F4 1720 aa15.65■□□□□ 0.1
MRPL55-234ENST00000497758 FCHSD2O94868 740 aa15.65■□□□□ 0.1
MRPL55-234ENST00000497758 CABP4P57796 275 aa15.65■□□□□ 0.1
MRPL55-234ENST00000497758 MTHFSDQ2M296 383 aaKnown RBP15.65■□□□□ 0.1
MRPL55-234ENST00000497758 GAS2L2Q8NHY3 880 aa15.65■□□□□ 0.1
MRPL55-234ENST00000497758 RSPH6AQ9H0K4 717 aa15.65■□□□□ 0.1
MRPL55-234ENST00000497758 PRKRIP1Q9H875 184 aaPredicted RBP15.65■□□□□ 0.1
MRPL55-234ENST00000497758 STK32BQ9NY57 414 aa15.65■□□□□ 0.1
MRPL55-234ENST00000497758 PALLDQ8WX93 1383 aa15.64■□□□□ 0.09
MRPL55-234ENST00000497758 KDM6AO15550 1401 aaPredicted RBP15.64■□□□□ 0.09
MRPL55-234ENST00000497758 NEFMP07197 916 aa15.64■□□□□ 0.09
MRPL55-234ENST00000497758 CCNL1Q9UK58 526 aaPredicted RBP15.64■□□□□ 0.09
MRPL55-234ENST00000497758 ANO8Q9HCE9 1232 aaPredicted RBP15.63■□□□□ 0.09
MRPL55-234ENST00000497758 ITGB4P16144 1822 aa15.62■□□□□ 0.09
MRPL55-234ENST00000497758 HMGB2P26583 209 aaKnown RBP15.62■□□□□ 0.09
MRPL55-234ENST00000497758 LRRC4BQ9NT99 713 aa15.62■□□□□ 0.09
MRPL55-234ENST00000497758 KCNQ4P56696 695 aa15.61■□□□□ 0.09
MRPL55-234ENST00000497758 PHACTR3Q96KR7 559 aa15.61■□□□□ 0.09
MRPL55-234ENST00000497758 PNNQ9H307 717 aaKnown RBP15.61■□□□□ 0.09
MRPL55-234ENST00000497758 ASAP1Q9ULH1 1129 aa15.61■□□□□ 0.09
MRPL55-234ENST00000497758 MAP3K5Q99683 1374 aa15.61■□□□□ 0.09
MRPL55-234ENST00000497758 GNAT3A8MTJ3 354 aa15.6■□□□□ 0.09
MRPL55-234ENST00000497758 RNMTO43148 476 aaKnown RBP15.6■□□□□ 0.09
MRPL55-234ENST00000497758 SLC15A2Q16348 729 aa15.6■□□□□ 0.09
MRPL55-234ENST00000497758 NFATC2IPQ8NCF5 419 aa15.6■□□□□ 0.09
MRPL55-234ENST00000497758 WDR43Q15061 677 aaKnown RBP eCLIP15.59■□□□□ 0.09
MRPL55-234ENST00000497758 LGR6Q9HBX8 967 aa15.59■□□□□ 0.09
MRPL55-234ENST00000497758 ATG3Q9NT62 314 aa15.59■□□□□ 0.09
MRPL55-234ENST00000497758 MAPK8IP3Q9UPT6 1336 aa15.59■□□□□ 0.09
MRPL55-234ENST00000497758 LY75O60449 1722 aa15.59■□□□□ 0.09
MRPL55-234ENST00000497758 LOC102724428A0A0B4J2F2 783 aa15.58■□□□□ 0.08
MRPL55-234ENST00000497758 ANP32CO43423 234 aa15.58■□□□□ 0.08
MRPL55-234ENST00000497758 SIK1P57059 783 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms