RNA–Protein interactions for RNA: ENST00000497730.1

TRA2A-210, Transcript of transformer 2 alpha homolog, human

TSL 3

Gene TRA2A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRA2A-210	ENST00000497730	RASA1	P20936	1047 aa		10.89	□□□□□ -0.67
TRA2A-210	ENST00000497730	TRIM50	Q86XT4	487 aa		10.89	□□□□□ -0.67
TRA2A-210	ENST00000497730	ZFAND3	Q9H8U3	227 aa		10.89	□□□□□ -0.67
TRA2A-210	ENST00000497730	ACIN1	Q9UKV3	1341 aa	Known RBP	10.88	□□□□□ -0.67
TRA2A-210	ENST00000497730	LCE2B	O14633	110 aa		10.88	□□□□□ -0.67
TRA2A-210	ENST00000497730	LILRA1	O75019	489 aa		10.88	□□□□□ -0.67
TRA2A-210	ENST00000497730	GTF2I	P78347	998 aa		10.88	□□□□□ -0.67
TRA2A-210	ENST00000497730	OGFOD1	Q8N543	542 aa		10.88	□□□□□ -0.67
TRA2A-210	ENST00000497730	TIMP2	P16035	220 aa		10.87	□□□□□ -0.67
TRA2A-210	ENST00000497730	PSME1	Q06323	249 aa		10.87	□□□□□ -0.67
TRA2A-210	ENST00000497730	LARP1	Q6PKG0	1096 aa	Known RBP	10.87	□□□□□ -0.67
TRA2A-210	ENST00000497730	ZNF594	Q96JF6	807 aa	Predicted RBP	10.87	□□□□□ -0.67
TRA2A-210	ENST00000497730	KLF16	Q9BXK1	252 aa	Predicted RBP	10.87	□□□□□ -0.67
TRA2A-210	ENST00000497730	ATP1A2	P50993	1020 aa		10.86	□□□□□ -0.67
TRA2A-210	ENST00000497730	CLDN10	P78369	228 aa		10.86	□□□□□ -0.67
TRA2A-210	ENST00000497730	CBLB	Q13191	982 aa		10.86	□□□□□ -0.67
TRA2A-210	ENST00000497730	DNAAF2	Q9NVR5	837 aa	Known RBP	10.86	□□□□□ -0.67
TRA2A-210	ENST00000497730	ADD1	P35611	737 aa	Known RBP	10.85	□□□□□ -0.67
TRA2A-210	ENST00000497730	CRTC2	Q53ET0	693 aa	Predicted RBP	10.85	□□□□□ -0.67
TRA2A-210	ENST00000497730	OSBPL3	Q9H4L5	887 aa		10.85	□□□□□ -0.67
TRA2A-210	ENST00000497730	PCDHGA11	Q9Y5H2	935 aa		10.85	□□□□□ -0.67
TRA2A-210	ENST00000497730	USP17L15	C9J2P7	530 aa		10.84	□□□□□ -0.67
TRA2A-210	ENST00000497730	USP17L10	C9JJH3	530 aa		10.84	□□□□□ -0.67
TRA2A-210	ENST00000497730	USP17L13	C9JLJ4	530 aa		10.84	□□□□□ -0.67
TRA2A-210	ENST00000497730	USP17L12	C9JPN9	530 aa		10.84	□□□□□ -0.67
TRA2A-210	ENST00000497730	USP17L11	C9JVI0	530 aa		10.84	□□□□□ -0.67
TRA2A-210	ENST00000497730	USP17L21	D6R901	530 aa		10.84	□□□□□ -0.67
TRA2A-210	ENST00000497730	USP17L18	D6R9N7	530 aa		10.84	□□□□□ -0.67
TRA2A-210	ENST00000497730	USP17L22	D6RA61	530 aa		10.84	□□□□□ -0.67
TRA2A-210	ENST00000497730	USP17L17	D6RBQ6	530 aa		10.84	□□□□□ -0.67
TRA2A-210	ENST00000497730	USP17L19	D6RCP7	530 aa		10.84	□□□□□ -0.67
TRA2A-210	ENST00000497730	USP17L20	D6RJB6	530 aa		10.84	□□□□□ -0.67
TRA2A-210	ENST00000497730	USP17L24	Q0WX57	530 aa		10.84	□□□□□ -0.67
TRA2A-210	ENST00000497730	PKDCC	Q504Y2	493 aa		10.84	□□□□□ -0.67
TRA2A-210	ENST00000497730	CYP2U1	Q7Z449	544 aa		10.84	□□□□□ -0.67
TRA2A-210	ENST00000497730	FAM196B	A6NMK8	535 aa		10.83	□□□□□ -0.68
TRA2A-210	ENST00000497730	NRG2	O14511	850 aa	Predicted RBP	10.83	□□□□□ -0.68
TRA2A-210	ENST00000497730	ATG7	O95352	703 aa		10.83	□□□□□ -0.68
TRA2A-210	ENST00000497730	KIAA1024	Q9UPX6	916 aa		10.83	□□□□□ -0.68
TRA2A-210	ENST00000497730	CAPN5	O15484	640 aa	Predicted RBP	10.82	□□□□□ -0.68
TRA2A-210	ENST00000497730	PTK7	Q13308	1070 aa		10.82	□□□□□ -0.68
TRA2A-210	ENST00000497730	STAU1	O95793	577 aa	Known RBP	10.81	□□□□□ -0.68
TRA2A-210	ENST00000497730	ADH1A	P07327	375 aa		10.81	□□□□□ -0.68
TRA2A-210	ENST00000497730	CCDC102B	Q68D86	513 aa		10.81	□□□□□ -0.68
TRA2A-210	ENST00000497730	LARGE2	Q8N3Y3	721 aa		10.81	□□□□□ -0.68
TRA2A-210	ENST00000497730	TPCN2	Q8NHX9	752 aa		10.81	□□□□□ -0.68
TRA2A-210	ENST00000497730	AGBL1	Q96MI9	1066 aa		10.81	□□□□□ -0.68
TRA2A-210	ENST00000497730	ARX	Q96QS3	562 aa		10.81	□□□□□ -0.68
TRA2A-210	ENST00000497730	NOVA2	Q9UNW9	492 aa	Known RBP	10.81	□□□□□ -0.68
TRA2A-210	ENST00000497730	RBM19	Q9Y4C8	960 aa	Known RBP	10.81	□□□□□ -0.68
TRA2A-210	ENST00000497730	ZBTB7B	O15156	539 aa	Predicted RBP	10.8	□□□□□ -0.68
TRA2A-210	ENST00000497730	DGAT1	O75907	488 aa		10.8	□□□□□ -0.68
TRA2A-210	ENST00000497730	CSB-PGBD3	P0DP91	1061 aa		10.8	□□□□□ -0.68
TRA2A-210	ENST00000497730		Q6ZVU0	165 aa		10.8	□□□□□ -0.68
TRA2A-210	ENST00000497730	RETREG2	Q8NC44	543 aa		10.8	□□□□□ -0.68
TRA2A-210	ENST00000497730	RELB	Q01201	579 aa		10.79	□□□□□ -0.68
TRA2A-210	ENST00000497730	DPYD	Q12882	1025 aa		10.79	□□□□□ -0.68
TRA2A-210	ENST00000497730	LAPTM4A	Q15012	233 aa		10.79	□□□□□ -0.68
TRA2A-210	ENST00000497730	ANKMY2	Q8IV38	441 aa		10.79	□□□□□ -0.68
TRA2A-210	ENST00000497730	HOMEZ	Q8IX15	550 aa		10.79	□□□□□ -0.68
TRA2A-210	ENST00000497730	RAB6B	Q9NRW1	208 aa		10.79	□□□□□ -0.68
TRA2A-210	ENST00000497730	ZMIZ1	Q9ULJ6	1067 aa		10.79	□□□□□ -0.68
TRA2A-210	ENST00000497730	AVP	P01185	164 aa		10.78	□□□□□ -0.68
TRA2A-210	ENST00000497730	MEIOB	Q8N635	442 aa		10.78	□□□□□ -0.68
TRA2A-210	ENST00000497730	ARHGEF10L	Q9HCE6	1279 aa		10.78	□□□□□ -0.68
TRA2A-210	ENST00000497730	GNRH1	P01148	92 aa		10.77	□□□□□ -0.69
TRA2A-210	ENST00000497730	GDF10	P55107	478 aa		10.77	□□□□□ -0.69
TRA2A-210	ENST00000497730	ELOA	Q14241	798 aa	Known RBP	10.77	□□□□□ -0.69
TRA2A-210	ENST00000497730	SIX5	Q8N196	739 aa		10.77	□□□□□ -0.69
TRA2A-210	ENST00000497730	FAM200A	Q8TCP9	573 aa		10.77	□□□□□ -0.69
TRA2A-210	ENST00000497730	STK32A	Q8WU08	396 aa		10.77	□□□□□ -0.69
TRA2A-210	ENST00000497730	ZNF395	Q9H8N7	513 aa	Predicted RBP	10.77	□□□□□ -0.69
TRA2A-210	ENST00000497730	SFI1	A8K8P3	1242 aa		10.76	□□□□□ -0.69
TRA2A-210	ENST00000497730	KDF1	Q8NAX2	398 aa	Predicted RBP	10.76	□□□□□ -0.69
TRA2A-210	ENST00000497730	ETNK1	Q9HBU6	452 aa		10.76	□□□□□ -0.69
TRA2A-210	ENST00000497730		A0A1W2PRU2	124 aa		10.75	□□□□□ -0.69
TRA2A-210	ENST00000497730	UPP2	O95045	317 aa		10.75	□□□□□ -0.69
TRA2A-210	ENST00000497730	PTGIR	P43119	386 aa		10.75	□□□□□ -0.69
TRA2A-210	ENST00000497730	SCNN1D	P51172	638 aa		10.75	□□□□□ -0.69
TRA2A-210	ENST00000497730	SEC13	P55735	322 aa		10.75	□□□□□ -0.69
TRA2A-210	ENST00000497730	TMEM164	Q5U3C3	297 aa		10.75	□□□□□ -0.69
TRA2A-210	ENST00000497730	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	10.75	□□□□□ -0.69
TRA2A-210	ENST00000497730	SERTAD1	Q9UHV2	236 aa		10.75	□□□□□ -0.69
TRA2A-210	ENST00000497730	TMEM229A	B2RXF0	380 aa		10.74	□□□□□ -0.69
TRA2A-210	ENST00000497730	MEN1	O00255	615 aa		10.74	□□□□□ -0.69
TRA2A-210	ENST00000497730	CTC1	Q2NKJ3	1217 aa		10.74	□□□□□ -0.69
TRA2A-210	ENST00000497730	ESCO1	Q5FWF5	840 aa		10.74	□□□□□ -0.69
TRA2A-210	ENST00000497730	TSEN34	Q9BSV6	310 aa	Known RBP	10.74	□□□□□ -0.69
TRA2A-210	ENST00000497730	ZNF358	Q9NW07	568 aa		10.74	□□□□□ -0.69
TRA2A-210	ENST00000497730	AXIN1	O15169	862 aa		10.73	□□□□□ -0.69
TRA2A-210	ENST00000497730	DKK1	O94907	266 aa		10.73	□□□□□ -0.69
TRA2A-210	ENST00000497730	INHA	P05111	366 aa		10.73	□□□□□ -0.69
TRA2A-210	ENST00000497730	C6orf118	Q5T5N4	469 aa		10.73	□□□□□ -0.69
TRA2A-210	ENST00000497730	LINC00528	Q8N1L1	170 aa		10.73	□□□□□ -0.69
TRA2A-210	ENST00000497730	CARNS1	A5YM72	827 aa		10.72	□□□□□ -0.69
TRA2A-210	ENST00000497730	BMP1	P13497	986 aa		10.72	□□□□□ -0.69
TRA2A-210	ENST00000497730	ST8SIA5	O15466	376 aa		10.71	□□□□□ -0.69
TRA2A-210	ENST00000497730	IL2RA	P01589	272 aa		10.71	□□□□□ -0.69
TRA2A-210	ENST00000497730	BMP2	P12643	396 aa		10.71	□□□□□ -0.69
TRA2A-210	ENST00000497730	CLN3	Q13286	438 aa		10.71	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms