RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 IP6K1Q92551 441 aa18.79■□□□□ 0.6
VPS26A-209ENST00000497564 DISP2A7MBM2 1401 aa18.79■□□□□ 0.6
VPS26A-209ENST00000497564 U2SURPO15042 1029 aaKnown RBP18.78■□□□□ 0.6
VPS26A-209ENST00000497564 HSP90AB2PQ58FF8 381 aa18.78■□□□□ 0.6
VPS26A-209ENST00000497564 RUNDC1Q96C34 613 aa18.78■□□□□ 0.6
VPS26A-209ENST00000497564 PNNQ9H307 717 aaKnown RBP18.78■□□□□ 0.6
VPS26A-209ENST00000497564 FCHSD2O94868 740 aa18.77■□□□□ 0.6
VPS26A-209ENST00000497564 NCBP3Q53F19 620 aaKnown RBP18.77■□□□□ 0.6
VPS26A-209ENST00000497564 LTV1Q96GA3 475 aaPredicted RBP18.77■□□□□ 0.6
VPS26A-209ENST00000497564 NLRP2Q9NX02 1062 aa18.77■□□□□ 0.6
VPS26A-209ENST00000497564 TNS1Q9HBL0 1735 aaKnown RBP18.77■□□□□ 0.59
VPS26A-209ENST00000497564 TRIM37O94972 964 aa18.76■□□□□ 0.59
VPS26A-209ENST00000497564 FAM196AQ6ZSG2 479 aa18.76■□□□□ 0.59
VPS26A-209ENST00000497564 SF3B2Q13435 895 aaKnown RBP18.75■□□□□ 0.59
VPS26A-209ENST00000497564 DDB1Q16531 1140 aa18.75■□□□□ 0.59
VPS26A-209ENST00000497564 CCDC146Q8IYE0 955 aa18.75■□□□□ 0.59
VPS26A-209ENST00000497564 PLEKHF1Q96S99 279 aa18.75■□□□□ 0.59
VPS26A-209ENST00000497564 KDRP35968 1356 aa18.74■□□□□ 0.59
VPS26A-209ENST00000497564 RSPH6AQ9H0K4 717 aa18.74■□□□□ 0.59
VPS26A-209ENST00000497564 MARCH10Q8NA82 808 aaPredicted RBP18.73■□□□□ 0.59
VPS26A-209ENST00000497564 IGSF1Q8N6C5 1336 aa18.73■□□□□ 0.59
VPS26A-209ENST00000497564 APAF1O14727 1248 aa18.72■□□□□ 0.59
VPS26A-209ENST00000497564 EN1Q05925 392 aaPredicted RBP18.72■□□□□ 0.59
VPS26A-209ENST00000497564 NCAPD2Q15021 1401 aa18.72■□□□□ 0.59
VPS26A-209ENST00000497564 CDCA7Q9BWT1 371 aaPredicted RBP18.71■□□□□ 0.59
VPS26A-209ENST00000497564 ZNF521Q96K83 1311 aa18.71■□□□□ 0.59
VPS26A-209ENST00000497564 OVOS2A0A0G2JMS6 1433 aa18.7■□□□□ 0.58
VPS26A-209ENST00000497564 BAG6P46379 1132 aa18.7■□□□□ 0.58
VPS26A-209ENST00000497564 PTF1AQ7RTS3 328 aa18.7■□□□□ 0.58
VPS26A-209ENST00000497564 TNS2Q63HR2 1409 aa18.69■□□□□ 0.58
VPS26A-209ENST00000497564 CCDC27Q2M243 656 aa18.69■□□□□ 0.58
VPS26A-209ENST00000497564 MAPK8IP3Q9UPT6 1336 aa18.69■□□□□ 0.58
VPS26A-209ENST00000497564 PRKAR2BP31323 418 aa18.68■□□□□ 0.58
VPS26A-209ENST00000497564 EYA1Q99502 592 aa18.68■□□□□ 0.58
VPS26A-209ENST00000497564 VIRMAQ69YN4 1812 aaKnown RBP18.67■□□□□ 0.58
VPS26A-209ENST00000497564 SBF2Q86WG5 1849 aa18.67■□□□□ 0.58
VPS26A-209ENST00000497564 EXOC5O00471 708 aa18.67■□□□□ 0.58
VPS26A-209ENST00000497564 APBA3O96018 575 aa18.67■□□□□ 0.58
VPS26A-209ENST00000497564 HMOX1P09601 288 aa18.67■□□□□ 0.58
VPS26A-209ENST00000497564 IL2RBP14784 551 aa18.67■□□□□ 0.58
VPS26A-209ENST00000497564 EZH2Q15910 746 aaKnown RBP18.67■□□□□ 0.58
VPS26A-209ENST00000497564 USHBP1Q8N6Y0 703 aa18.67■□□□□ 0.58
VPS26A-209ENST00000497564 NEFMP07197 916 aa18.66■□□□□ 0.58
VPS26A-209ENST00000497564 NBPF6Q5VWK0 638 aa18.66■□□□□ 0.58
VPS26A-209ENST00000497564 SULT6B1Q6IMI4 303 aa18.66■□□□□ 0.58
VPS26A-209ENST00000497564 NBPF4Q96M43 638 aa18.66■□□□□ 0.58
VPS26A-209ENST00000497564 CAMKK2Q96RR4 588 aa18.66■□□□□ 0.58
VPS26A-209ENST00000497564 TMPOP42166 694 aaKnown RBP18.65■□□□□ 0.58
VPS26A-209ENST00000497564 AEBP1Q8IUX7 1158 aa18.65■□□□□ 0.58
VPS26A-209ENST00000497564 MEGF6O75095 1541 aa18.64■□□□□ 0.57
VPS26A-209ENST00000497564 SENP3-EIF4A1A0A087X0R7 540 aa18.63■□□□□ 0.57
VPS26A-209ENST00000497564 SALL2Q9Y467 1007 aaPredicted RBP18.63■□□□□ 0.57
VPS26A-209ENST00000497564 NFE2L2Q16236 605 aa18.62■□□□□ 0.57
VPS26A-209ENST00000497564 WWC1Q8IX03 1113 aa18.62■□□□□ 0.57
VPS26A-209ENST00000497564 PHACTR3Q96KR7 559 aa18.62■□□□□ 0.57
VPS26A-209ENST00000497564 BCL9O00512 1426 aa18.62■□□□□ 0.57
VPS26A-209ENST00000497564 PLEKHG2Q9H7P9 1386 aa18.61■□□□□ 0.57
VPS26A-209ENST00000497564 KCNQ2O43526 872 aa18.61■□□□□ 0.57
VPS26A-209ENST00000497564 PKD1L3Q7Z443 1732 aa18.6■□□□□ 0.57
VPS26A-209ENST00000497564 GOLGA2Q08379 1002 aa18.6■□□□□ 0.57
VPS26A-209ENST00000497564 WDR63Q8IWG1 891 aa18.6■□□□□ 0.57
VPS26A-209ENST00000497564 RRP7AQ9Y3A4 280 aaKnown RBP18.6■□□□□ 0.57
VPS26A-209ENST00000497564 PSDA5PKW4 1024 aaPredicted RBP18.59■□□□□ 0.57
VPS26A-209ENST00000497564 DDX54Q8TDD1 881 aaKnown RBP18.59■□□□□ 0.57
VPS26A-209ENST00000497564 ACSBG1Q96GR2 724 aa18.59■□□□□ 0.57
VPS26A-209ENST00000497564 BCL11BQ9C0K0 894 aaPredicted RBP18.59■□□□□ 0.57
VPS26A-209ENST00000497564 SHANK3Q9BYB0 1731 aa18.59■□□□□ 0.57
VPS26A-209ENST00000497564 RREB1Q92766 1687 aa18.59■□□□□ 0.57
VPS26A-209ENST00000497564 RIPK4P57078 832 aa18.58■□□□□ 0.56
VPS26A-209ENST00000497564 TRIM35Q9UPQ4 493 aa18.58■□□□□ 0.56
VPS26A-209ENST00000497564 NEUROD2Q15784 382 aa18.57■□□□□ 0.56
VPS26A-209ENST00000497564 TRMT2AQ8IZ69 625 aaKnown RBP18.57■□□□□ 0.56
VPS26A-209ENST00000497564 NUP188Q5SRE5 1749 aa18.57■□□□□ 0.56
VPS26A-209ENST00000497564 SLFN5Q08AF3 891 aa18.56■□□□□ 0.56
VPS26A-209ENST00000497564 LMOD3Q0VAK6 560 aa18.56■□□□□ 0.56
VPS26A-209ENST00000497564 CDCA7LQ96GN5 454 aa18.56■□□□□ 0.56
VPS26A-209ENST00000497564 NHSQ6T4R5 1651 aa18.56■□□□□ 0.56
VPS26A-209ENST00000497564 IL16Q14005 1332 aa18.55■□□□□ 0.56
VPS26A-209ENST00000497564 KAT6BQ8WYB5 2073 aa18.55■□□□□ 0.56
VPS26A-209ENST00000497564 E9PSI1 815 aa18.55■□□□□ 0.56
VPS26A-209ENST00000497564 R3HDM1Q15032 1099 aaKnown RBP18.55■□□□□ 0.56
VPS26A-209ENST00000497564 ZCRB1Q8TBF4 217 aaKnown RBP18.55■□□□□ 0.56
VPS26A-209ENST00000497564 ADAMTS7Q9UKP4 1686 aa18.54■□□□□ 0.56
VPS26A-209ENST00000497564 PROM2Q8N271 834 aa18.54■□□□□ 0.56
VPS26A-209ENST00000497564 GAS2L2Q8NHY3 880 aa18.54■□□□□ 0.56
VPS26A-209ENST00000497564 DUSP27Q5VZP5 1158 aa18.53■□□□□ 0.56
VPS26A-209ENST00000497564 RAPGEF4Q8WZA2 1011 aa18.53■□□□□ 0.56
VPS26A-209ENST00000497564 SCN11AQ9UI33 1791 aa18.53■□□□□ 0.56
VPS26A-209ENST00000497564 PLSCR1O15162 318 aa18.52■□□□□ 0.56
VPS26A-209ENST00000497564 RGPD3A6NKT7 1758 aaPredicted RBP18.52■□□□□ 0.55
VPS26A-209ENST00000497564 RGPD4Q7Z3J3 1758 aa18.52■□□□□ 0.55
VPS26A-209ENST00000497564 HTATSF1O43719 755 aaKnown RBP18.51■□□□□ 0.55
VPS26A-209ENST00000497564 TATP17735 454 aaPredicted RBP18.51■□□□□ 0.55
VPS26A-209ENST00000497564 CALD1Q05682 793 aaKnown RBP18.51■□□□□ 0.55
VPS26A-209ENST00000497564 MTHFSDQ2M296 383 aaKnown RBP18.51■□□□□ 0.55
VPS26A-209ENST00000497564 SPINK5Q9NQ38 1064 aaPredicted RBP18.51■□□□□ 0.55
VPS26A-209ENST00000497564 BTAF1O14981 1849 aa18.51■□□□□ 0.55
VPS26A-209ENST00000497564 SIPA1L3O60292 1781 aaPredicted RBP18.5■□□□□ 0.55
VPS26A-209ENST00000497564 DOT1LQ8TEK3 1739 aa18.5■□□□□ 0.55
VPS26A-209ENST00000497564 AMOTQ4VCS5 1084 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms