RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 ARHGAP45Q92619 1136 aa14.69□□□□□ -0.06
SNRNP200-208ENST00000497539 FRAT1Q92837 279 aaPredicted RBP14.69□□□□□ -0.06
SNRNP200-208ENST00000497539 LMTK3Q96Q04 1460 aa14.69□□□□□ -0.06
SNRNP200-208ENST00000497539 HOXC9P31274 260 aa14.69□□□□□ -0.06
SNRNP200-208ENST00000497539 SMC4Q9NTJ3 1288 aa14.69□□□□□ -0.06
SNRNP200-208ENST00000497539 HTATSF1O43719 755 aaKnown RBP14.68□□□□□ -0.06
SNRNP200-208ENST00000497539 DZIP1LQ8IYY4 767 aaKnown RBP14.68□□□□□ -0.06
SNRNP200-208ENST00000497539 COG6Q9Y2V7 657 aa14.68□□□□□ -0.06
SNRNP200-208ENST00000497539 ABCC6O95255 1503 aa14.68□□□□□ -0.06
SNRNP200-208ENST00000497539 ATF7IPQ6VMQ6 1270 aa14.68□□□□□ -0.06
SNRNP200-208ENST00000497539 MBIPQ9NS73 344 aa14.68□□□□□ -0.06
SNRNP200-208ENST00000497539 USP19O94966 1318 aa14.67□□□□□ -0.06
SNRNP200-208ENST00000497539 IPO8O15397 1037 aaKnown RBP14.67□□□□□ -0.06
SNRNP200-208ENST00000497539 VAMP4O75379 141 aa14.67□□□□□ -0.06
SNRNP200-208ENST00000497539 CHMP4AQ9BY43 222 aa14.67□□□□□ -0.06
SNRNP200-208ENST00000497539 TRIM27P14373 513 aa14.66□□□□□ -0.06
SNRNP200-208ENST00000497539 AMPHP49418 695 aa14.66□□□□□ -0.06
SNRNP200-208ENST00000497539 ABTB2Q8N961 1025 aa14.66□□□□□ -0.06
SNRNP200-208ENST00000497539 KCNH5Q8NCM2 988 aa14.66□□□□□ -0.06
SNRNP200-208ENST00000497539 LMO7Q8WWI1 1683 aa14.66□□□□□ -0.06
SNRNP200-208ENST00000497539 MED1Q15648 1581 aaPredicted RBP14.66□□□□□ -0.06
SNRNP200-208ENST00000497539 CHL1O00533 1208 aa14.66□□□□□ -0.06
SNRNP200-208ENST00000497539 XIRP1Q702N8 1843 aaKnown RBP14.66□□□□□ -0.06
SNRNP200-208ENST00000497539 EYA1Q99502 592 aa14.65□□□□□ -0.06
SNRNP200-208ENST00000497539 CRYBG1Q9Y4K1 1723 aa14.65□□□□□ -0.06
SNRNP200-208ENST00000497539 C8orf34Q49A92 452 aa14.65□□□□□ -0.06
SNRNP200-208ENST00000497539 PAXIP1Q6ZW49 1069 aaPredicted RBP14.65□□□□□ -0.06
SNRNP200-208ENST00000497539 MRPL50Q8N5N7 158 aaKnown RBP14.65□□□□□ -0.06
SNRNP200-208ENST00000497539 C19orf44Q9H6X5 657 aa14.65□□□□□ -0.06
SNRNP200-208ENST00000497539 FRAT2O75474 233 aaPredicted RBP14.64□□□□□ -0.07
SNRNP200-208ENST00000497539 HAP1P54257 671 aaPredicted RBP14.64□□□□□ -0.07
SNRNP200-208ENST00000497539 GAS2L2Q8NHY3 880 aa14.64□□□□□ -0.07
SNRNP200-208ENST00000497539 IP6K1Q92551 441 aa14.64□□□□□ -0.07
SNRNP200-208ENST00000497539 BCL2L13Q9BXK5 485 aa14.64□□□□□ -0.07
SNRNP200-208ENST00000497539 DDX19BQ9UMR2 479 aa14.64□□□□□ -0.07
SNRNP200-208ENST00000497539 TNNQ9UQP3 1299 aa14.64□□□□□ -0.07
SNRNP200-208ENST00000497539 STRCQ7RTU9 1775 aa14.64□□□□□ -0.07
SNRNP200-208ENST00000497539 FAM161AQ3B820 660 aa14.63□□□□□ -0.07
SNRNP200-208ENST00000497539 THUMPD2Q9BTF0 503 aaKnown RBP14.63□□□□□ -0.07
SNRNP200-208ENST00000497539 NOB1Q9ULX3 412 aaKnown RBP14.63□□□□□ -0.07
SNRNP200-208ENST00000497539 IGHDP01880 384 aa14.63□□□□□ -0.07
SNRNP200-208ENST00000497539 ESCO1Q5FWF5 840 aa14.63□□□□□ -0.07
SNRNP200-208ENST00000497539 NAP1L2Q9ULW6 460 aaPredicted RBP14.63□□□□□ -0.07
SNRNP200-208ENST00000497539 PROSER2Q86WR7 435 aaPredicted RBP14.62□□□□□ -0.07
SNRNP200-208ENST00000497539 FTSJ3Q8IY81 847 aaKnown RBP14.62□□□□□ -0.07
SNRNP200-208ENST00000497539 FAM43AQ8N2R8 423 aa14.62□□□□□ -0.07
SNRNP200-208ENST00000497539 BABAM1Q9NWV8 329 aa14.62□□□□□ -0.07
SNRNP200-208ENST00000497539 PLEKHG2Q9H7P9 1386 aa14.62□□□□□ -0.07
SNRNP200-208ENST00000497539 PSME1Q06323 249 aa14.62□□□□□ -0.07
SNRNP200-208ENST00000497539 ABCC4O15439 1325 aa14.62□□□□□ -0.07
SNRNP200-208ENST00000497539 N4BP2Q86UW6 1770 aaPredicted RBP14.62□□□□□ -0.07
SNRNP200-208ENST00000497539 SOS1Q07889 1333 aaPredicted RBP14.61□□□□□ -0.07
SNRNP200-208ENST00000497539 MSH6P52701 1360 aa14.61□□□□□ -0.07
SNRNP200-208ENST00000497539 FAM208AQ9UK61 1670 aaKnown RBP14.61□□□□□ -0.07
SNRNP200-208ENST00000497539 ADAMTS7Q9UKP4 1686 aa14.61□□□□□ -0.07
SNRNP200-208ENST00000497539 HDAC1Q13547 482 aaPredicted RBP14.61□□□□□ -0.07
SNRNP200-208ENST00000497539 MTHFSDQ2M296 383 aaKnown RBP14.61□□□□□ -0.07
SNRNP200-208ENST00000497539 TWISTNBQ3B726 338 aaPredicted RBP14.61□□□□□ -0.07
SNRNP200-208ENST00000497539 PCDHB15Q9Y5E8 787 aa14.61□□□□□ -0.07
SNRNP200-208ENST00000497539 OVOS2A0A0G2JMS6 1433 aa14.61□□□□□ -0.07
SNRNP200-208ENST00000497539 FAM83GA6ND36 823 aa14.6□□□□□ -0.07
SNRNP200-208ENST00000497539 TULP1O00294 542 aaPredicted RBP14.6□□□□□ -0.07
SNRNP200-208ENST00000497539 HSP90AA2PQ14568 343 aaPredicted RBP14.6□□□□□ -0.07
SNRNP200-208ENST00000497539 CHMP4BQ9H444 224 aaKnown RBP14.6□□□□□ -0.07
SNRNP200-208ENST00000497539 DHX37Q8IY37 1157 aaKnown RBP14.6□□□□□ -0.07
SNRNP200-208ENST00000497539 RWDD1Q9H446 243 aaPredicted RBP14.6□□□□□ -0.07
SNRNP200-208ENST00000497539 TMEM94Q12767 1356 aa14.6□□□□□ -0.07
SNRNP200-208ENST00000497539 RGPD2P0DJD1 1756 aa14.6□□□□□ -0.07
SNRNP200-208ENST00000497539 TSPYL6Q8N831 410 aa14.59□□□□□ -0.07
SNRNP200-208ENST00000497539 NAP1L5Q96NT1 182 aaPredicted RBP14.59□□□□□ -0.07
SNRNP200-208ENST00000497539 KDM3BQ7LBC6 1761 aa14.59□□□□□ -0.07
SNRNP200-208ENST00000497539 C8orf58Q8NAV2 365 aa14.59□□□□□ -0.07
SNRNP200-208ENST00000497539 ZBTB40Q9NUA8 1239 aa14.59□□□□□ -0.07
SNRNP200-208ENST00000497539 MAP3K5Q99683 1374 aa14.59□□□□□ -0.07
SNRNP200-208ENST00000497539 COL18A1P39060 1754 aa14.59□□□□□ -0.07
SNRNP200-208ENST00000497539 ORAI2Q96SN7 254 aa14.59□□□□□ -0.07
SNRNP200-208ENST00000497539 PRDM4Q9UKN5 801 aa14.59□□□□□ -0.07
SNRNP200-208ENST00000497539 PXDNQ92626 1479 aa14.58□□□□□ -0.08
SNRNP200-208ENST00000497539 RGS12O14924 1447 aa14.58□□□□□ -0.08
SNRNP200-208ENST00000497539 C14orf37Q86TY3 774 aa14.58□□□□□ -0.08
SNRNP200-208ENST00000497539 ARHGEF25Q86VW2 580 aa14.58□□□□□ -0.08
SNRNP200-208ENST00000497539 TMEM57Q8N5G2 664 aa14.58□□□□□ -0.08
SNRNP200-208ENST00000497539 CACNA1FO60840 1977 aa14.57□□□□□ -0.08
SNRNP200-208ENST00000497539 SOX12O15370 315 aa14.57□□□□□ -0.08
SNRNP200-208ENST00000497539 RBM33Q96EV2 1170 aaKnown RBP14.57□□□□□ -0.08
SNRNP200-208ENST00000497539 API5Q9BZZ5 524 aaKnown RBP14.57□□□□□ -0.08
SNRNP200-208ENST00000497539 DCTN1Q14203 1278 aa14.57□□□□□ -0.08
SNRNP200-208ENST00000497539 CEMIPQ8WUJ3 1361 aa14.56□□□□□ -0.08
SNRNP200-208ENST00000497539 NUTM2GQ5VZR2 741 aa14.56□□□□□ -0.08
SNRNP200-208ENST00000497539 MCM10Q7L590 875 aa14.56□□□□□ -0.08
SNRNP200-208ENST00000497539 KRT28Q7Z3Y7 464 aa14.55□□□□□ -0.08
SNRNP200-208ENST00000497539 SIPA1L3O60292 1781 aaPredicted RBP14.55□□□□□ -0.08
SNRNP200-208ENST00000497539 GNAT3A8MTJ3 354 aa14.55□□□□□ -0.08
SNRNP200-208ENST00000497539 IPO4Q8TEX9 1081 aaKnown RBP14.55□□□□□ -0.08
SNRNP200-208ENST00000497539 RTF1Q92541 710 aaKnown RBP14.55□□□□□ -0.08
SNRNP200-208ENST00000497539 PTPRCP08575 1304 aa14.54□□□□□ -0.08
SNRNP200-208ENST00000497539 TNS3Q68CZ2 1445 aa14.54□□□□□ -0.08
SNRNP200-208ENST00000497539 GCP02774 474 aa14.54□□□□□ -0.08
SNRNP200-208ENST00000497539 SAMD1Q6SPF0 538 aaPredicted RBP14.54□□□□□ -0.08
SNRNP200-208ENST00000497539 ITPRIPQ8IWB1 547 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms