RNA–Protein interactions for RNA: ENST00000497440.5

SHROOM3-210, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 611 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-210ENST00000497440 NHSQ6T4R5 1651 aa14.99□□□□□ -0.01
SHROOM3-210ENST00000497440 NUP188Q5SRE5 1749 aa14.98□□□□□ -0.01
SHROOM3-210ENST00000497440 EYA1Q99502 592 aa14.98□□□□□ -0.01
SHROOM3-210ENST00000497440 POLR3GLQ9BT43 218 aa14.98□□□□□ -0.01
SHROOM3-210ENST00000497440 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.98□□□□□ -0.01
SHROOM3-210ENST00000497440 KNSTRNQ9Y448 316 aa14.97□□□□□ -0.01
SHROOM3-210ENST00000497440 EIF4A2Q14240 407 aaKnown RBP14.96□□□□□ -0.01
SHROOM3-210ENST00000497440 NKX1-1Q15270 411 aaPredicted RBP14.95□□□□□ -0.02
SHROOM3-210ENST00000497440 USHBP1Q8N6Y0 703 aa14.95□□□□□ -0.02
SHROOM3-210ENST00000497440 IGSF1Q8N6C5 1336 aa14.94□□□□□ -0.02
SHROOM3-210ENST00000497440 CYP27B1O15528 508 aa14.94□□□□□ -0.02
SHROOM3-210ENST00000497440 TXNRD1Q16881 649 aa14.94□□□□□ -0.02
SHROOM3-210ENST00000497440 RAPGEF4Q8WZA2 1011 aa14.94□□□□□ -0.02
SHROOM3-210ENST00000497440 PKD1L3Q7Z443 1732 aa14.93□□□□□ -0.02
SHROOM3-210ENST00000497440 TATP17735 454 aaPredicted RBP14.93□□□□□ -0.02
SHROOM3-210ENST00000497440 R3HDM1Q15032 1099 aaKnown RBP14.93□□□□□ -0.02
SHROOM3-210ENST00000497440 MORC1Q86VD1 984 aa14.93□□□□□ -0.02
SHROOM3-210ENST00000497440 DDX54Q8TDD1 881 aaKnown RBP14.93□□□□□ -0.02
SHROOM3-210ENST00000497440 LRP5O75197 1615 aa14.92□□□□□ -0.02
SHROOM3-210ENST00000497440 PSDA5PKW4 1024 aaPredicted RBP14.92□□□□□ -0.02
SHROOM3-210ENST00000497440 ACSBG1Q96GR2 724 aa14.92□□□□□ -0.02
SHROOM3-210ENST00000497440 BTAF1O14981 1849 aa14.92□□□□□ -0.02
SHROOM3-210ENST00000497440 KDRP35968 1356 aa14.91□□□□□ -0.02
SHROOM3-210ENST00000497440 PPM1GO15355 546 aaPredicted RBP14.91□□□□□ -0.02
SHROOM3-210ENST00000497440 IL13P35225 146 aa14.91□□□□□ -0.02
SHROOM3-210ENST00000497440 PRIM1P49642 420 aaKnown RBP14.91□□□□□ -0.02
SHROOM3-210ENST00000497440 NBPF14Q5TI25 921 aa14.91□□□□□ -0.02
SHROOM3-210ENST00000497440 ANO8Q9HCE9 1232 aaPredicted RBP14.91□□□□□ -0.02
SHROOM3-210ENST00000497440 KAT6BQ8WYB5 2073 aa14.91□□□□□ -0.02
SHROOM3-210ENST00000497440 PCDH11XQ9BZA7 1347 aa14.91□□□□□ -0.02
SHROOM3-210ENST00000497440 PCDH11YQ9BZA8 1340 aa14.91□□□□□ -0.02
SHROOM3-210ENST00000497440 TNNT2P45379 298 aaPredicted RBP14.9□□□□□ -0.02
SHROOM3-210ENST00000497440 LRRC4BQ9NT99 713 aa14.9□□□□□ -0.02
SHROOM3-210ENST00000497440 PAPPAQ13219 1627 aa14.89□□□□□ -0.03
SHROOM3-210ENST00000497440 SLC27A3Q5K4L6 730 aa14.88□□□□□ -0.03
SHROOM3-210ENST00000497440 LY75O60449 1722 aa14.87□□□□□ -0.03
SHROOM3-210ENST00000497440 MTHFSP49914 203 aa14.87□□□□□ -0.03
SHROOM3-210ENST00000497440 SLC15A2Q16348 729 aa14.87□□□□□ -0.03
SHROOM3-210ENST00000497440 SPG7Q9UQ90 795 aa14.86□□□□□ -0.03
SHROOM3-210ENST00000497440 DOT1LQ8TEK3 1739 aa14.86□□□□□ -0.03
SHROOM3-210ENST00000497440 CASZ1Q86V15 1759 aa14.85□□□□□ -0.03
SHROOM3-210ENST00000497440 UTRNP46939 3433 aa14.85□□□□□ -0.03
SHROOM3-210ENST00000497440 PHKG2P15735 406 aa14.85□□□□□ -0.03
SHROOM3-210ENST00000497440 AKT1S1Q96B36 256 aa14.85□□□□□ -0.03
SHROOM3-210ENST00000497440 TOGARAM1Q9Y4F4 1720 aa14.84□□□□□ -0.03
SHROOM3-210ENST00000497440 IFNL2Q8IZJ0 200 aa14.84□□□□□ -0.03
SHROOM3-210ENST00000497440 COL3A1P02461 1466 aaPredicted RBP14.83□□□□□ -0.03
SHROOM3-210ENST00000497440 AMOTQ4VCS5 1084 aa14.83□□□□□ -0.04
SHROOM3-210ENST00000497440 CC2D1BQ5T0F9 858 aaKnown RBP14.83□□□□□ -0.04
SHROOM3-210ENST00000497440 AEBP1Q8IUX7 1158 aa14.83□□□□□ -0.04
SHROOM3-210ENST00000497440 PDGFDQ9GZP0 370 aaPredicted RBP14.83□□□□□ -0.04
SHROOM3-210ENST00000497440 PIGBQ92521 554 aa14.82□□□□□ -0.04
SHROOM3-210ENST00000497440 ITGB4P16144 1822 aa14.82□□□□□ -0.04
SHROOM3-210ENST00000497440 ZNF827Q17R98 1081 aa14.81□□□□□ -0.04
SHROOM3-210ENST00000497440 SGIP1Q9BQI5 828 aa14.81□□□□□ -0.04
SHROOM3-210ENST00000497440 ERVV-2B6SEH9 535 aa14.8□□□□□ -0.04
SHROOM3-210ENST00000497440 PLEKHO1Q53GL0 409 aaPredicted RBP14.8□□□□□ -0.04
SHROOM3-210ENST00000497440 SULT6B1Q6IMI4 303 aa14.8□□□□□ -0.04
SHROOM3-210ENST00000497440 SYTL4Q96C24 671 aaPredicted RBP14.8□□□□□ -0.04
SHROOM3-210ENST00000497440 STK32BQ9NY57 414 aa14.8□□□□□ -0.04
SHROOM3-210ENST00000497440 QSER1Q2KHR3 1735 aa14.8□□□□□ -0.04
SHROOM3-210ENST00000497440 PTGER2P43116 358 aa14.79□□□□□ -0.04
SHROOM3-210ENST00000497440 DCAF5Q96JK2 942 aa14.79□□□□□ -0.04
SHROOM3-210ENST00000497440 GOLGB1Q14789 3259 aaKnown RBP14.78□□□□□ -0.04
SHROOM3-210ENST00000497440 DIAPH1O60610 1272 aaKnown RBP14.78□□□□□ -0.04
SHROOM3-210ENST00000497440 HSP90AB1P08238 724 aaKnown RBP14.78□□□□□ -0.04
SHROOM3-210ENST00000497440 MPRIPQ6WCQ1 1025 aa14.78□□□□□ -0.04
SHROOM3-210ENST00000497440 SPON1Q9HCB6 807 aa14.78□□□□□ -0.04
SHROOM3-210ENST00000497440 COL24A1Q17RW2 1714 aa14.78□□□□□ -0.04
SHROOM3-210ENST00000497440 KDM6AO15550 1401 aaPredicted RBP14.77□□□□□ -0.04
SHROOM3-210ENST00000497440 HMGB2P26583 209 aaKnown RBP14.77□□□□□ -0.05
SHROOM3-210ENST00000497440 SMARCC1Q92922 1105 aaPredicted RBP14.77□□□□□ -0.05
SHROOM3-210ENST00000497440 PALLDQ8WX93 1383 aa14.76□□□□□ -0.05
SHROOM3-210ENST00000497440 SLC16A10Q8TF71 515 aa14.76□□□□□ -0.05
SHROOM3-210ENST00000497440 CCNL1Q9UK58 526 aaPredicted RBP14.76□□□□□ -0.05
SHROOM3-210ENST00000497440 PNPLA7Q6ZV29 1317 aa14.75□□□□□ -0.05
SHROOM3-210ENST00000497440 PPP2R1AP30153 589 aa14.75□□□□□ -0.05
SHROOM3-210ENST00000497440 KCNQ4P56696 695 aa14.75□□□□□ -0.05
SHROOM3-210ENST00000497440 MTFR1LQ9H019 292 aa14.75□□□□□ -0.05
SHROOM3-210ENST00000497440 ATG3Q9NT62 314 aa14.75□□□□□ -0.05
SHROOM3-210ENST00000497440 TAF1LQ8IZX4 1826 aa14.75□□□□□ -0.05
SHROOM3-210ENST00000497440 ZNF831Q5JPB2 1677 aa14.74□□□□□ -0.05
SHROOM3-210ENST00000497440 ADAMTS7Q9UKP4 1686 aa14.74□□□□□ -0.05
SHROOM3-210ENST00000497440 ASAP1Q9ULH1 1129 aa14.74□□□□□ -0.05
SHROOM3-210ENST00000497440 AKAP4Q5JQC9 854 aa14.73□□□□□ -0.05
SHROOM3-210ENST00000497440 ZNF530Q6P9A1 599 aaPredicted RBP14.73□□□□□ -0.05
SHROOM3-210ENST00000497440 SLC4A9Q96Q91 983 aa14.73□□□□□ -0.05
SHROOM3-210ENST00000497440 TMOD3Q9NYL9 352 aa14.73□□□□□ -0.05
SHROOM3-210ENST00000497440 TUBGCP6Q96RT7 1819 aa14.72□□□□□ -0.05
SHROOM3-210ENST00000497440 LOC102724428A0A0B4J2F2 783 aa14.72□□□□□ -0.05
SHROOM3-210ENST00000497440 SIK1P57059 783 aa14.72□□□□□ -0.05
SHROOM3-210ENST00000497440 ZBTB7AO95365 584 aa14.71□□□□□ -0.05
SHROOM3-210ENST00000497440 HMOX1P09601 288 aa14.71□□□□□ -0.05
SHROOM3-210ENST00000497440 ITPK1Q13572 414 aa14.71□□□□□ -0.05
SHROOM3-210ENST00000497440 MTHFSDQ2M296 383 aaKnown RBP14.71□□□□□ -0.05
SHROOM3-210ENST00000497440 C5P01031 1676 aa14.71□□□□□ -0.06
SHROOM3-210ENST00000497440 SCN11AQ9UI33 1791 aa14.7□□□□□ -0.06
SHROOM3-210ENST00000497440 AMIGO3Q86WK7 504 aa14.7□□□□□ -0.06
SHROOM3-210ENST00000497440 COL23A1Q86Y22 540 aaPredicted RBP14.7□□□□□ -0.06
SHROOM3-210ENST00000497440 MRC1P22897 1456 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms