RNA–Protein interactions for RNA: ENST00000497121.1

CPS1-208, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 4

Gene CPS1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-208ENST00000497121 TATP17735 454 aaPredicted RBP10.16□□□□□ -0.78
CPS1-208ENST00000497121 RAPGEF4Q8WZA2 1011 aa10.16□□□□□ -0.78
CPS1-208ENST00000497121 RREB1Q92766 1687 aa10.15□□□□□ -0.78
CPS1-208ENST00000497121 FAM208AQ9UK61 1670 aaKnown RBP10.15□□□□□ -0.78
CPS1-208ENST00000497121 KIF7Q2M1P5 1343 aa10.15□□□□□ -0.78
CPS1-208ENST00000497121 WNK3Q9BYP7 1800 aa10.15□□□□□ -0.78
CPS1-208ENST00000497121 PPM1GO15355 546 aaPredicted RBP10.15□□□□□ -0.78
CPS1-208ENST00000497121 PER1O15534 1290 aaPredicted RBP10.15□□□□□ -0.78
CPS1-208ENST00000497121 TNNT2P45379 298 aaPredicted RBP10.15□□□□□ -0.78
CPS1-208ENST00000497121 EIF4A2Q14240 407 aaKnown RBP10.15□□□□□ -0.78
CPS1-208ENST00000497121 AMER1Q5JTC6 1135 aaPredicted RBP10.15□□□□□ -0.78
CPS1-208ENST00000497121 STK32BQ9NY57 414 aa10.15□□□□□ -0.78
CPS1-208ENST00000497121 LTN1O94822 1766 aa10.15□□□□□ -0.78
CPS1-208ENST00000497121 SMG6Q86US8 1419 aaKnown RBP10.15□□□□□ -0.79
CPS1-208ENST00000497121 LRP5O75197 1615 aa10.15□□□□□ -0.79
CPS1-208ENST00000497121 NUP188Q5SRE5 1749 aa10.14□□□□□ -0.79
CPS1-208ENST00000497121 ZNF827Q17R98 1081 aa10.14□□□□□ -0.79
CPS1-208ENST00000497121 AKT1S1Q96B36 256 aa10.14□□□□□ -0.79
CPS1-208ENST00000497121 SPON1Q9HCB6 807 aa10.14□□□□□ -0.79
CPS1-208ENST00000497121 PTGER2P43116 358 aa10.13□□□□□ -0.79
CPS1-208ENST00000497121 NKX1-1Q15270 411 aaPredicted RBP10.13□□□□□ -0.79
CPS1-208ENST00000497121 SLC27A3Q5K4L6 730 aa10.13□□□□□ -0.79
CPS1-208ENST00000497121 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.13□□□□□ -0.79
CPS1-208ENST00000497121 SBF2Q86WG5 1849 aa10.12□□□□□ -0.79
CPS1-208ENST00000497121 ZBTB7AO95365 584 aa10.12□□□□□ -0.79
CPS1-208ENST00000497121 KCNQ4P56696 695 aa10.12□□□□□ -0.79
CPS1-208ENST00000497121 MORC1Q86VD1 984 aa10.12□□□□□ -0.79
CPS1-208ENST00000497121 SYTL4Q96C24 671 aaPredicted RBP10.12□□□□□ -0.79
CPS1-208ENST00000497121 SGIP1Q9BQI5 828 aa10.12□□□□□ -0.79
CPS1-208ENST00000497121 PCDH11XQ9BZA7 1347 aa10.11□□□□□ -0.79
CPS1-208ENST00000497121 PCDH11YQ9BZA8 1340 aa10.11□□□□□ -0.79
CPS1-208ENST00000497121 KNSTRNQ9Y448 316 aa10.11□□□□□ -0.79
CPS1-208ENST00000497121 NHSQ6T4R5 1651 aa10.11□□□□□ -0.79
CPS1-208ENST00000497121 RGPD3A6NKT7 1758 aaPredicted RBP10.11□□□□□ -0.79
CPS1-208ENST00000497121 RGPD4Q7Z3J3 1758 aa10.11□□□□□ -0.79
CPS1-208ENST00000497121 IGSF1Q8N6C5 1336 aa10.1□□□□□ -0.79
CPS1-208ENST00000497121 SPG7Q9UQ90 795 aa10.1□□□□□ -0.79
CPS1-208ENST00000497121 ATF5Q9Y2D1 282 aaPredicted RBP10.1□□□□□ -0.79
CPS1-208ENST00000497121 PHKG2P15735 406 aa10.09□□□□□ -0.79
CPS1-208ENST00000497121 IL13P35225 146 aa10.09□□□□□ -0.79
CPS1-208ENST00000497121 PIGBQ92521 554 aa10.09□□□□□ -0.79
CPS1-208ENST00000497121 MTFR1LQ9H019 292 aa10.09□□□□□ -0.79
CPS1-208ENST00000497121 PNPLA7Q6ZV29 1317 aa10.08□□□□□ -0.8
CPS1-208ENST00000497121 PAPPAQ13219 1627 aa10.08□□□□□ -0.8
CPS1-208ENST00000497121 MPRIPQ6WCQ1 1025 aa10.08□□□□□ -0.8
CPS1-208ENST00000497121 AEBP1Q8IUX7 1158 aa10.08□□□□□ -0.8
CPS1-208ENST00000497121 CCNL1Q9UK58 526 aaPredicted RBP10.08□□□□□ -0.8
CPS1-208ENST00000497121 KIF20BQ96Q89 1820 aa10.07□□□□□ -0.8
CPS1-208ENST00000497121 PLEKHG2Q9H7P9 1386 aa10.07□□□□□ -0.8
CPS1-208ENST00000497121 IFNL2Q8IZJ0 200 aa10.07□□□□□ -0.8
CPS1-208ENST00000497121 RGPD2P0DJD1 1756 aa10.06□□□□□ -0.8
CPS1-208ENST00000497121 PALLDQ8WX93 1383 aa10.06□□□□□ -0.8
CPS1-208ENST00000497121 MTHFSP49914 203 aa10.06□□□□□ -0.8
CPS1-208ENST00000497121 SLC16A10Q8TF71 515 aa10.06□□□□□ -0.8
CPS1-208ENST00000497121 PPP1R1BQ9UD71 204 aaPredicted RBP10.06□□□□□ -0.8
CPS1-208ENST00000497121 SHANK3Q9BYB0 1731 aa10.06□□□□□ -0.8
CPS1-208ENST00000497121 ANKRD26Q9UPS8 1709 aa10.05□□□□□ -0.8
CPS1-208ENST00000497121 NPC1L1Q9UHC9 1359 aa10.05□□□□□ -0.8
CPS1-208ENST00000497121 AMIGO3Q86WK7 504 aa10.05□□□□□ -0.8
CPS1-208ENST00000497121 COL23A1Q86Y22 540 aaPredicted RBP10.05□□□□□ -0.8
CPS1-208ENST00000497121 SMARCC1Q92922 1105 aaPredicted RBP10.05□□□□□ -0.8
CPS1-208ENST00000497121 ATG3Q9NT62 314 aa10.05□□□□□ -0.8
CPS1-208ENST00000497121 TFCP2L1Q9NZI6 479 aa10.05□□□□□ -0.8
CPS1-208ENST00000497121 ASAP1Q9ULH1 1129 aa10.05□□□□□ -0.8
CPS1-208ENST00000497121 CASZ1Q86V15 1759 aa10.05□□□□□ -0.8
CPS1-208ENST00000497121 BTAF1O14981 1849 aa10.05□□□□□ -0.8
CPS1-208ENST00000497121 KDRP35968 1356 aa10.04□□□□□ -0.8
CPS1-208ENST00000497121 AMOTQ4VCS5 1084 aa10.04□□□□□ -0.8
CPS1-208ENST00000497121 PLEKHO1Q53GL0 409 aaPredicted RBP10.04□□□□□ -0.8
CPS1-208ENST00000497121 CC2D1BQ5T0F9 858 aaKnown RBP10.04□□□□□ -0.8
CPS1-208ENST00000497121 SULT6B1Q6IMI4 303 aa10.04□□□□□ -0.8
CPS1-208ENST00000497121 ARXQ96QS3 562 aa10.04□□□□□ -0.8
CPS1-208ENST00000497121 SYT17Q9BSW7 474 aa10.04□□□□□ -0.8
CPS1-208ENST00000497121 UTRNP46939 3433 aa10.04□□□□□ -0.8
CPS1-208ENST00000497121 LOC102724428A0A0B4J2F2 783 aa10.03□□□□□ -0.8
CPS1-208ENST00000497121 ERVV-2B6SEH9 535 aa10.03□□□□□ -0.8
CPS1-208ENST00000497121 SIK1P57059 783 aa10.03□□□□□ -0.8
CPS1-208ENST00000497121 ITPK1Q13572 414 aa10.03□□□□□ -0.8
CPS1-208ENST00000497121 DCAF5Q96JK2 942 aa10.03□□□□□ -0.8
CPS1-208ENST00000497121 SLC4A9Q96Q91 983 aa10.03□□□□□ -0.8
CPS1-208ENST00000497121 FHDC1Q9C0D6 1143 aaPredicted RBP10.03□□□□□ -0.8
CPS1-208ENST00000497121 TMOD3Q9NYL9 352 aa10.03□□□□□ -0.8
CPS1-208ENST00000497121 ZNF530Q6P9A1 599 aaPredicted RBP10.02□□□□□ -0.81
CPS1-208ENST00000497121 SMIM5Q71RC9 77 aa10.02□□□□□ -0.81
CPS1-208ENST00000497121 LINC00116Q8NCU8 138 aa10.02□□□□□ -0.81
CPS1-208ENST00000497121 KDM6AO15550 1401 aaPredicted RBP10.01□□□□□ -0.81
CPS1-208ENST00000497121 HSP90AB1P08238 724 aaKnown RBP10.01□□□□□ -0.81
CPS1-208ENST00000497121 PKD1L3Q7Z443 1732 aa10.01□□□□□ -0.81
CPS1-208ENST00000497121 DOT1LQ8TEK3 1739 aa10.01□□□□□ -0.81
CPS1-208ENST00000497121 MAP3K5Q99683 1374 aa10.01□□□□□ -0.81
CPS1-208ENST00000497121 MAP2P11137 1827 aaKnown RBP10□□□□□ -0.81
CPS1-208ENST00000497121 DIAPH1O60610 1272 aaKnown RBP9.99□□□□□ -0.81
CPS1-208ENST00000497121 HMOX1P09601 288 aa9.99□□□□□ -0.81
CPS1-208ENST00000497121 HMGB2P26583 209 aaKnown RBP9.99□□□□□ -0.81
CPS1-208ENST00000497121 FLAD1Q8NFF5 587 aa9.99□□□□□ -0.81
CPS1-208ENST00000497121 LGR6Q9HBX8 967 aa9.99□□□□□ -0.81
CPS1-208ENST00000497121 TOGARAM1Q9Y4F4 1720 aa9.99□□□□□ -0.81
CPS1-208ENST00000497121 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.98□□□□□ -0.81
CPS1-208ENST00000497121 POLD1P28340 1107 aa9.98□□□□□ -0.81
CPS1-208ENST00000497121 ATP6V1AP38606 617 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms