RNA–Protein interactions for RNA: ENST00000497091.1

PBX3-211, Transcript of PBX homeobox 3, humanhuman

TSL 5

Gene PBX3, Length 425 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-211ENST00000497091 NCAPD2Q15021 1401 aa25.61■■□□□ 1.69
PBX3-211ENST00000497091 NUDCQ9Y266 331 aa25.6■■□□□ 1.69
PBX3-211ENST00000497091 LRRC37A3O60309 1634 aa25.59■■□□□ 1.69
PBX3-211ENST00000497091 U2SURPO15042 1029 aaKnown RBP25.59■■□□□ 1.69
PBX3-211ENST00000497091 AEBP1Q8IUX7 1158 aa25.59■■□□□ 1.69
PBX3-211ENST00000497091 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.59■■□□□ 1.69
PBX3-211ENST00000497091 HMOX1P09601 288 aa25.56■■□□□ 1.68
PBX3-211ENST00000497091 PLEKHO1Q53GL0 409 aaPredicted RBP25.56■■□□□ 1.68
PBX3-211ENST00000497091 PRKRIP1Q9H875 184 aaPredicted RBP25.56■■□□□ 1.68
PBX3-211ENST00000497091 WNK3Q9BYP7 1800 aa25.56■■□□□ 1.68
PBX3-211ENST00000497091 BCL9O00512 1426 aa25.55■■□□□ 1.68
PBX3-211ENST00000497091 PCDH11XQ9BZA7 1347 aa25.55■■□□□ 1.68
PBX3-211ENST00000497091 PCDH11YQ9BZA8 1340 aa25.55■■□□□ 1.68
PBX3-211ENST00000497091 APBA3O96018 575 aa25.54■■□□□ 1.68
PBX3-211ENST00000497091 AMOTQ4VCS5 1084 aa25.54■■□□□ 1.68
PBX3-211ENST00000497091 BCL11BQ9C0K0 894 aaPredicted RBP25.54■■□□□ 1.68
PBX3-211ENST00000497091 MYBBP1AQ9BQG0 1328 aaKnown RBP25.54■■□□□ 1.68
PBX3-211ENST00000497091 CYP27B1O15528 508 aa25.53■■□□□ 1.68
PBX3-211ENST00000497091 BAG6P46379 1132 aa25.53■■□□□ 1.68
PBX3-211ENST00000497091 ACSBG1Q96GR2 724 aa25.53■■□□□ 1.68
PBX3-211ENST00000497091 KDRP35968 1356 aa25.53■■□□□ 1.68
PBX3-211ENST00000497091 DEFB132Q7Z7B7 95 aa25.52■■□□□ 1.68
PBX3-211ENST00000497091 COL3A1P02461 1466 aaPredicted RBP25.52■■□□□ 1.68
PBX3-211ENST00000497091 KCNQ2O43526 872 aa25.51■■□□□ 1.67
PBX3-211ENST00000497091 IFNL2Q8IZJ0 200 aa25.51■■□□□ 1.67
PBX3-211ENST00000497091 U2AF1L5P0DN76 240 aaPredicted RBP25.5■■□□□ 1.67
PBX3-211ENST00000497091 U2AF1Q01081 240 aaKnown RBP eCLIP25.5■■□□□ 1.67
PBX3-211ENST00000497091 SRCAPQ6ZRS2 3230 aa25.5■■□□□ 1.67
PBX3-211ENST00000497091 PLEKHG2Q9H7P9 1386 aa25.5■■□□□ 1.67
PBX3-211ENST00000497091 PTF1AQ7RTS3 328 aa25.49■■□□□ 1.67
PBX3-211ENST00000497091 EN1Q05925 392 aaPredicted RBP25.48■■□□□ 1.67
PBX3-211ENST00000497091 PHKG2P15735 406 aa25.47■■□□□ 1.67
PBX3-211ENST00000497091 PRIM1P49642 420 aaKnown RBP25.47■■□□□ 1.67
PBX3-211ENST00000497091 NKX1-1Q15270 411 aaPredicted RBP25.47■■□□□ 1.67
PBX3-211ENST00000497091 SYTL4Q96C24 671 aaPredicted RBP25.47■■□□□ 1.67
PBX3-211ENST00000497091 ANP32CO43423 234 aa25.46■■□□□ 1.67
PBX3-211ENST00000497091 ZNF530Q6P9A1 599 aaPredicted RBP25.46■■□□□ 1.67
PBX3-211ENST00000497091 FCHSD2O94868 740 aa25.45■■□□□ 1.66
PBX3-211ENST00000497091 RGPD1P0DJD0 1748 aa25.44■■□□□ 1.66
PBX3-211ENST00000497091 HSP90AB1P08238 724 aaKnown RBP25.44■■□□□ 1.66
PBX3-211ENST00000497091 C1orf141Q5JVX7 400 aa25.44■■□□□ 1.66
PBX3-211ENST00000497091 PLSCR1O15162 318 aa25.42■■□□□ 1.66
PBX3-211ENST00000497091 EZH2Q15910 746 aaKnown RBP25.42■■□□□ 1.66
PBX3-211ENST00000497091 CAMKK2Q96RR4 588 aa25.42■■□□□ 1.66
PBX3-211ENST00000497091 RSPH6AQ9H0K4 717 aa25.42■■□□□ 1.66
PBX3-211ENST00000497091 PRKAR2BP31323 418 aa25.41■■□□□ 1.66
PBX3-211ENST00000497091 MTHFSDQ2M296 383 aaKnown RBP25.41■■□□□ 1.66
PBX3-211ENST00000497091 DCAF5Q96JK2 942 aa25.4■■□□□ 1.66
PBX3-211ENST00000497091 AKAP4Q5JQC9 854 aa25.39■■□□□ 1.66
PBX3-211ENST00000497091 MPRIPQ6WCQ1 1025 aa25.39■■□□□ 1.66
PBX3-211ENST00000497091 PKD1L3Q7Z443 1732 aa25.37■■□□□ 1.65
PBX3-211ENST00000497091 GAS2L2Q8NHY3 880 aa25.37■■□□□ 1.65
PBX3-211ENST00000497091 PHACTR3Q96KR7 559 aa25.37■■□□□ 1.65
PBX3-211ENST00000497091 PNNQ9H307 717 aaKnown RBP25.37■■□□□ 1.65
PBX3-211ENST00000497091 NEFMP07197 916 aa25.36■■□□□ 1.65
PBX3-211ENST00000497091 SHANK3Q9BYB0 1731 aa25.36■■□□□ 1.65
PBX3-211ENST00000497091 ERVV-2B6SEH9 535 aa25.35■■□□□ 1.65
PBX3-211ENST00000497091 WDR43Q15061 677 aaKnown RBP eCLIP25.34■■□□□ 1.65
PBX3-211ENST00000497091 TMOD3Q9NYL9 352 aa25.34■■□□□ 1.65
PBX3-211ENST00000497091 SBF2Q86WG5 1849 aa25.33■■□□□ 1.65
PBX3-211ENST00000497091 PIGBQ92521 554 aa25.33■■□□□ 1.65
PBX3-211ENST00000497091 CABP4P57796 275 aa25.32■■□□□ 1.64
PBX3-211ENST00000497091 PROM2Q8N271 834 aa25.32■■□□□ 1.64
PBX3-211ENST00000497091 TNS1Q9HBL0 1735 aaKnown RBP25.32■■□□□ 1.64
PBX3-211ENST00000497091 TXNRD1Q16881 649 aa25.31■■□□□ 1.64
PBX3-211ENST00000497091 NHSQ6T4R5 1651 aa25.3■■□□□ 1.64
PBX3-211ENST00000497091 GNAT3A8MTJ3 354 aa25.3■■□□□ 1.64
PBX3-211ENST00000497091 LGR6Q9HBX8 967 aa25.3■■□□□ 1.64
PBX3-211ENST00000497091 RNMTO43148 476 aaKnown RBP25.29■■□□□ 1.64
PBX3-211ENST00000497091 PLEKHF1Q96S99 279 aa25.29■■□□□ 1.64
PBX3-211ENST00000497091 KAT6BQ8WYB5 2073 aa25.28■■□□□ 1.64
PBX3-211ENST00000497091 NFATC2IPQ8NCF5 419 aa25.28■■□□□ 1.64
PBX3-211ENST00000497091 SMARCC1Q92922 1105 aaPredicted RBP25.28■■□□□ 1.64
PBX3-211ENST00000497091 ADAMTS8Q9UP79 889 aa25.28■■□□□ 1.64
PBX3-211ENST00000497091 NBPF14Q5TI25 921 aa25.27■■□□□ 1.64
PBX3-211ENST00000497091 CCDC184Q52MB2 194 aa25.26■■□□□ 1.63
PBX3-211ENST00000497091 MAPK8IP3Q9UPT6 1336 aa25.26■■□□□ 1.63
PBX3-211ENST00000497091 KDM6AO15550 1401 aaPredicted RBP25.26■■□□□ 1.63
PBX3-211ENST00000497091 SLC27A3Q5K4L6 730 aa25.25■■□□□ 1.63
PBX3-211ENST00000497091 DOT1LQ8TEK3 1739 aa25.24■■□□□ 1.63
PBX3-211ENST00000497091 MAP3K5Q99683 1374 aa25.24■■□□□ 1.63
PBX3-211ENST00000497091 IL17REQ8NFR9 667 aa25.24■■□□□ 1.63
PBX3-211ENST00000497091 RTF1Q92541 710 aaKnown RBP25.24■■□□□ 1.63
PBX3-211ENST00000497091 MRS2Q9HD23 443 aa25.24■■□□□ 1.63
PBX3-211ENST00000497091 ASAP1Q9ULH1 1129 aa25.24■■□□□ 1.63
PBX3-211ENST00000497091 SLC52A2Q9HAB3 445 aa25.23■■□□□ 1.63
PBX3-211ENST00000497091 ATG3Q9NT62 314 aa25.23■■□□□ 1.63
PBX3-211ENST00000497091 HTATSF1O43719 755 aaKnown RBP25.22■■□□□ 1.63
PBX3-211ENST00000497091 NFE2L2Q16236 605 aa25.21■■□□□ 1.63
PBX3-211ENST00000497091 RUNDC1Q96C34 613 aa25.21■■□□□ 1.63
PBX3-211ENST00000497091 LRRC4BQ9NT99 713 aa25.21■■□□□ 1.63
PBX3-211ENST00000497091 CCNL1Q9UK58 526 aaPredicted RBP25.21■■□□□ 1.63
PBX3-211ENST00000497091 PALLDQ8WX93 1383 aa25.2■■□□□ 1.63
PBX3-211ENST00000497091 TEFQ10587 303 aa25.2■■□□□ 1.62
PBX3-211ENST00000497091 CCDC146Q8IYE0 955 aa25.2■■□□□ 1.62
PBX3-211ENST00000497091 BTAF1O14981 1849 aa25.2■■□□□ 1.62
PBX3-211ENST00000497091 KCNQ4P56696 695 aa25.19■■□□□ 1.62
PBX3-211ENST00000497091 HMGB2P26583 209 aaKnown RBP25.18■■□□□ 1.62
PBX3-211ENST00000497091 PNISRQ8TF01 805 aaKnown RBP25.18■■□□□ 1.62
PBX3-211ENST00000497091 TOGARAM1Q9Y4F4 1720 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms