RNA–Protein interactions for RNA: ENST00000496907.1

HMGCL-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 858 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-206ENST00000496907 KTN1Q86UP2 1357 aaKnown RBP8.34□□□□□ -1.07
HMGCL-206ENST00000496907 ALS2Q96Q42 1657 aa8.34□□□□□ -1.08
HMGCL-206ENST00000496907 CPSF1Q10570 1443 aaKnown RBP8.33□□□□□ -1.08
HMGCL-206ENST00000496907 PDE3BQ13370 1112 aa8.33□□□□□ -1.08
HMGCL-206ENST00000496907 KCNH5Q8NCM2 988 aa8.33□□□□□ -1.08
HMGCL-206ENST00000496907 POLR3GLQ9BT43 218 aa8.33□□□□□ -1.08
HMGCL-206ENST00000496907 GPBP1L1Q9HC44 474 aaPredicted RBP8.33□□□□□ -1.08
HMGCL-206ENST00000496907 STRN4Q9NRL3 753 aa8.33□□□□□ -1.08
HMGCL-206ENST00000496907 ATP10DQ9P241 1426 aa8.33□□□□□ -1.08
HMGCL-206ENST00000496907 KNSTRNQ9Y448 316 aa8.33□□□□□ -1.08
HMGCL-206ENST00000496907 QRICH2Q9H0J4 1663 aa8.33□□□□□ -1.08
HMGCL-206ENST00000496907 ANKRD36BQ8N2N9 1353 aa8.33□□□□□ -1.08
HMGCL-206ENST00000496907 WASHC2AQ641Q2 1341 aa8.32□□□□□ -1.08
HMGCL-206ENST00000496907 KLHL34Q8N239 644 aa8.32□□□□□ -1.08
HMGCL-206ENST00000496907 PCNTO95613 3336 aa8.32□□□□□ -1.08
HMGCL-206ENST00000496907 CRYBG1Q9Y4K1 1723 aa8.32□□□□□ -1.08
HMGCL-206ENST00000496907 CGNL1Q0VF96 1302 aa8.31□□□□□ -1.08
HMGCL-206ENST00000496907 KIF7Q2M1P5 1343 aa8.31□□□□□ -1.08
HMGCL-206ENST00000496907 SPATA31A1Q5TZJ5 1347 aa8.31□□□□□ -1.08
HMGCL-206ENST00000496907 TTC21BQ7Z4L5 1316 aa8.31□□□□□ -1.08
HMGCL-206ENST00000496907 USP6P35125 1406 aa8.31□□□□□ -1.08
HMGCL-206ENST00000496907 EDC4Q6P2E9 1401 aaKnown RBP8.31□□□□□ -1.08
HMGCL-206ENST00000496907 APLP1P51693 650 aa8.31□□□□□ -1.08
HMGCL-206ENST00000496907 NLRP6P59044 892 aa8.31□□□□□ -1.08
HMGCL-206ENST00000496907 HTRA3P83110 453 aa8.31□□□□□ -1.08
HMGCL-206ENST00000496907 PANK3Q9H999 370 aa8.31□□□□□ -1.08
HMGCL-206ENST00000496907 ANO8Q9HCE9 1232 aaPredicted RBP8.31□□□□□ -1.08
HMGCL-206ENST00000496907 ZNF316A6NFI3 1004 aaPredicted RBP8.3□□□□□ -1.08
HMGCL-206ENST00000496907 CHRNA2Q15822 529 aa8.3□□□□□ -1.08
HMGCL-206ENST00000496907 FAM161AQ3B820 660 aa8.3□□□□□ -1.08
HMGCL-206ENST00000496907 COG3Q96JB2 828 aa8.3□□□□□ -1.08
HMGCL-206ENST00000496907 KIAA0232Q92628 1395 aa8.3□□□□□ -1.08
HMGCL-206ENST00000496907 CCDC7Q96M83 1385 aa8.3□□□□□ -1.08
HMGCL-206ENST00000496907 CASZ1Q86V15 1759 aa8.3□□□□□ -1.08
HMGCL-206ENST00000496907 ITSN1Q15811 1721 aa8.29□□□□□ -1.08
HMGCL-206ENST00000496907 C11orf95C9JLR9 678 aaPredicted RBP8.29□□□□□ -1.08
HMGCL-206ENST00000496907 EVA1CP58658 441 aa8.29□□□□□ -1.08
HMGCL-206ENST00000496907 USP31Q70CQ4 1352 aa8.29□□□□□ -1.08
HMGCL-206ENST00000496907 PHRF1Q9P1Y6 1649 aaKnown RBP8.29□□□□□ -1.08
HMGCL-206ENST00000496907 A0A1W2PP64 1363 aa8.28□□□□□ -1.08
HMGCL-206ENST00000496907 NSD2O96028 1365 aa8.28□□□□□ -1.08
HMGCL-206ENST00000496907 GCP02774 474 aa8.28□□□□□ -1.08
HMGCL-206ENST00000496907 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.28□□□□□ -1.08
HMGCL-206ENST00000496907 TNS2Q63HR2 1409 aa8.28□□□□□ -1.08
HMGCL-206ENST00000496907 SSH2Q76I76 1423 aa8.28□□□□□ -1.08
HMGCL-206ENST00000496907 FYB1O15117 783 aa8.27□□□□□ -1.09
HMGCL-206ENST00000496907 ZC3H6P61129 1189 aaKnown RBP8.27□□□□□ -1.09
HMGCL-206ENST00000496907 CARD14Q9BXL6 1004 aa8.27□□□□□ -1.09
HMGCL-206ENST00000496907 RGPD3A6NKT7 1758 aaPredicted RBP8.27□□□□□ -1.09
HMGCL-206ENST00000496907 RGPD4Q7Z3J3 1758 aa8.27□□□□□ -1.09
HMGCL-206ENST00000496907 NPC1L1Q9UHC9 1359 aa8.26□□□□□ -1.09
HMGCL-206ENST00000496907 PER1O15534 1290 aaPredicted RBP8.26□□□□□ -1.09
HMGCL-206ENST00000496907 NUTM2GQ5VZR2 741 aa8.26□□□□□ -1.09
HMGCL-206ENST00000496907 BARGINQ6ZT62 677 aa8.26□□□□□ -1.09
HMGCL-206ENST00000496907 ARXQ96QS3 562 aa8.26□□□□□ -1.09
HMGCL-206ENST00000496907 BCL11BQ9C0K0 894 aaPredicted RBP8.26□□□□□ -1.09
HMGCL-206ENST00000496907 USP19O94966 1318 aa8.26□□□□□ -1.09
HMGCL-206ENST00000496907 PARP4Q9UKK3 1724 aaKnown RBP8.26□□□□□ -1.09
HMGCL-206ENST00000496907 LARP1Q6PKG0 1096 aaKnown RBP8.25□□□□□ -1.09
HMGCL-206ENST00000496907 TCP11L2Q8N4U5 519 aa8.25□□□□□ -1.09
HMGCL-206ENST00000496907 OVOS2A0A0G2JMS6 1433 aa8.25□□□□□ -1.09
HMGCL-206ENST00000496907 OVOS2A0A0J9YW53 1432 aa8.25□□□□□ -1.09
HMGCL-206ENST00000496907 OVOS2Q6IE36 1432 aa8.25□□□□□ -1.09
HMGCL-206ENST00000496907 CD163L1Q9NR16 1453 aa8.25□□□□□ -1.09
HMGCL-206ENST00000496907 CPDO75976 1380 aa8.24□□□□□ -1.09
HMGCL-206ENST00000496907 KIF24Q5T7B8 1368 aa8.24□□□□□ -1.09
HMGCL-206ENST00000496907 MORC1Q86VD1 984 aa8.24□□□□□ -1.09
HMGCL-206ENST00000496907 NME9Q86XW9 330 aa8.24□□□□□ -1.09
HMGCL-206ENST00000496907 SLAIN1Q8ND83 568 aa8.24□□□□□ -1.09
HMGCL-206ENST00000496907 KLRG1Q96E93 195 aa8.24□□□□□ -1.09
HMGCL-206ENST00000496907 COLQQ9Y215 455 aaPredicted RBP8.24□□□□□ -1.09
HMGCL-206ENST00000496907 SBF2Q86WG5 1849 aa8.24□□□□□ -1.09
HMGCL-206ENST00000496907 TOPAZ1Q8N9V7 1692 aa8.24□□□□□ -1.09
HMGCL-206ENST00000496907 NSD3Q9BZ95 1437 aa8.23□□□□□ -1.09
HMGCL-206ENST00000496907 YBX3P16989 372 aaKnown RBP eCLIP8.23□□□□□ -1.09
HMGCL-206ENST00000496907 ARHGEF25Q86VW2 580 aa8.23□□□□□ -1.09
HMGCL-206ENST00000496907 GGNBP2Q9H3C7 697 aa8.23□□□□□ -1.09
HMGCL-206ENST00000496907 PEAK1Q9H792 1746 aa8.23□□□□□ -1.09
HMGCL-206ENST00000496907 AATKQ6ZMQ8 1374 aa8.22□□□□□ -1.09
HMGCL-206ENST00000496907 LRRC37A3O60309 1634 aa8.22□□□□□ -1.09
HMGCL-206ENST00000496907 ZBTB7CA1YPR0 619 aa8.22□□□□□ -1.09
HMGCL-206ENST00000496907 AMPHP49418 695 aa8.22□□□□□ -1.09
HMGCL-206ENST00000496907 DDX10Q13206 875 aaKnown RBP8.22□□□□□ -1.09
HMGCL-206ENST00000496907 RALBP1Q15311 655 aa8.22□□□□□ -1.09
HMGCL-206ENST00000496907 AMER1Q5JTC6 1135 aaPredicted RBP8.22□□□□□ -1.09
HMGCL-206ENST00000496907 JMYQ8N9B5 988 aa8.22□□□□□ -1.09
HMGCL-206ENST00000496907 SGIP1Q9BQI5 828 aa8.22□□□□□ -1.09
HMGCL-206ENST00000496907 STK32BQ9NY57 414 aa8.22□□□□□ -1.09
HMGCL-206ENST00000496907 LMO7Q8WWI1 1683 aa8.21□□□□□ -1.09
HMGCL-206ENST00000496907 AKAP12Q02952 1782 aa8.21□□□□□ -1.1
HMGCL-206ENST00000496907 KIF3CO14782 793 aa8.21□□□□□ -1.1
HMGCL-206ENST00000496907 PLSCR1O15162 318 aa8.21□□□□□ -1.1
HMGCL-206ENST00000496907 NLGN2Q8NFZ4 835 aa8.21□□□□□ -1.1
HMGCL-206ENST00000496907 IP6K1Q92551 441 aa8.21□□□□□ -1.1
HMGCL-206ENST00000496907 MARVELD3Q96A59 401 aa8.21□□□□□ -1.1
HMGCL-206ENST00000496907 TMEM121BQ9BXQ6 578 aaPredicted RBP8.21□□□□□ -1.1
HMGCL-206ENST00000496907 MTFR1LQ9H019 292 aa8.21□□□□□ -1.1
HMGCL-206ENST00000496907 THRAP3Q9Y2W1 955 aaKnown RBP8.21□□□□□ -1.1
HMGCL-206ENST00000496907 WDR90Q96KV7 1748 aa8.2□□□□□ -1.1
HMGCL-206ENST00000496907 HSPA1AP0DMV8 641 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms