RNA–Protein interactions for RNA: ENST00000496882.5

SRRM1-220, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-220ENST00000496882 CAMKK2Q96RR4 588 aa10.88□□□□□ -0.67
SRRM1-220ENST00000496882 LRRC37A3O60309 1634 aa10.87□□□□□ -0.67
SRRM1-220ENST00000496882 PRKCSHP14314 528 aaPredicted RBP10.87□□□□□ -0.67
SRRM1-220ENST00000496882 IL2RBP14784 551 aa10.87□□□□□ -0.67
SRRM1-220ENST00000496882 R3HDM1Q15032 1099 aaKnown RBP10.87□□□□□ -0.67
SRRM1-220ENST00000496882 IP6K1Q92551 441 aa10.87□□□□□ -0.67
SRRM1-220ENST00000496882 LTN1O94822 1766 aa10.87□□□□□ -0.67
SRRM1-220ENST00000496882 RGPD5Q99666 1765 aa10.87□□□□□ -0.67
SRRM1-220ENST00000496882 TNS2Q63HR2 1409 aa10.86□□□□□ -0.67
SRRM1-220ENST00000496882 LTV1Q96GA3 475 aaPredicted RBP10.86□□□□□ -0.67
SRRM1-220ENST00000496882 POLR3GLQ9BT43 218 aa10.86□□□□□ -0.67
SRRM1-220ENST00000496882 BCL11BQ9C0K0 894 aaPredicted RBP10.86□□□□□ -0.67
SRRM1-220ENST00000496882 WNK3Q9BYP7 1800 aa10.86□□□□□ -0.67
SRRM1-220ENST00000496882 SMG6Q86US8 1419 aaKnown RBP10.85□□□□□ -0.67
SRRM1-220ENST00000496882 MARCH10Q8NA82 808 aaPredicted RBP10.85□□□□□ -0.67
SRRM1-220ENST00000496882 GGNBP2Q9H3C7 697 aa10.85□□□□□ -0.67
SRRM1-220ENST00000496882 EIF4G2P78344 907 aaKnown RBP eCLIP10.84□□□□□ -0.67
SRRM1-220ENST00000496882 RTL1A6NKG5 1358 aa10.84□□□□□ -0.67
SRRM1-220ENST00000496882 BCL9O00512 1426 aa10.84□□□□□ -0.67
SRRM1-220ENST00000496882 MAP3K19Q56UN5 1328 aa10.84□□□□□ -0.67
SRRM1-220ENST00000496882 FYB1O15117 783 aa10.83□□□□□ -0.68
SRRM1-220ENST00000496882 PLSCR1O15162 318 aa10.83□□□□□ -0.68
SRRM1-220ENST00000496882 HOXC9P31274 260 aa10.83□□□□□ -0.68
SRRM1-220ENST00000496882 FAM208AQ9UK61 1670 aaKnown RBP10.82□□□□□ -0.68
SRRM1-220ENST00000496882 PEAK1Q9H792 1746 aa10.82□□□□□ -0.68
SRRM1-220ENST00000496882 RRS1Q15050 365 aaKnown RBP10.82□□□□□ -0.68
SRRM1-220ENST00000496882 TSHZ2Q9NRE2 1034 aa10.82□□□□□ -0.68
SRRM1-220ENST00000496882 NSD3Q9BZ95 1437 aa10.82□□□□□ -0.68
SRRM1-220ENST00000496882 RREB1Q92766 1687 aa10.82□□□□□ -0.68
SRRM1-220ENST00000496882 CGNL1Q0VF96 1302 aa10.82□□□□□ -0.68
SRRM1-220ENST00000496882 LRP5O75197 1615 aa10.81□□□□□ -0.68
SRRM1-220ENST00000496882 ACSBG1Q96GR2 724 aa10.81□□□□□ -0.68
SRRM1-220ENST00000496882 DDX54Q8TDD1 881 aaKnown RBP10.8□□□□□ -0.68
SRRM1-220ENST00000496882 RAPGEF4Q8WZA2 1011 aa10.8□□□□□ -0.68
SRRM1-220ENST00000496882 SBF2Q86WG5 1849 aa10.79□□□□□ -0.68
SRRM1-220ENST00000496882 KIF20BQ96Q89 1820 aa10.79□□□□□ -0.68
SRRM1-220ENST00000496882 FLT4P35916 1363 aa10.79□□□□□ -0.68
SRRM1-220ENST00000496882 KIF24Q5T7B8 1368 aa10.79□□□□□ -0.68
SRRM1-220ENST00000496882 NUP188Q5SRE5 1749 aa10.79□□□□□ -0.68
SRRM1-220ENST00000496882 HSPA5P11021 654 aaKnown RBP10.79□□□□□ -0.68
SRRM1-220ENST00000496882 FBLN1P23142 703 aa10.79□□□□□ -0.68
SRRM1-220ENST00000496882 STK32BQ9NY57 414 aa10.79□□□□□ -0.68
SRRM1-220ENST00000496882 RGPD3A6NKT7 1758 aaPredicted RBP10.79□□□□□ -0.68
SRRM1-220ENST00000496882 RGPD4Q7Z3J3 1758 aa10.79□□□□□ -0.68
SRRM1-220ENST00000496882 PPM1GO15355 546 aaPredicted RBP10.78□□□□□ -0.68
SRRM1-220ENST00000496882 TATP17735 454 aaPredicted RBP10.78□□□□□ -0.68
SRRM1-220ENST00000496882 TXNRD1Q16881 649 aa10.78□□□□□ -0.68
SRRM1-220ENST00000496882 ZCRB1Q8TBF4 217 aaKnown RBP10.78□□□□□ -0.68
SRRM1-220ENST00000496882 PPP1R1BQ9UD71 204 aaPredicted RBP10.78□□□□□ -0.68
SRRM1-220ENST00000496882 INSRP06213 1382 aa10.77□□□□□ -0.68
SRRM1-220ENST00000496882 MYOM1P52179 1685 aa10.77□□□□□ -0.69
SRRM1-220ENST00000496882 KCNQ2O43526 872 aa10.77□□□□□ -0.69
SRRM1-220ENST00000496882 TPRNQ4KMQ1 711 aa10.77□□□□□ -0.69
SRRM1-220ENST00000496882 PTF1AQ7RTS3 328 aa10.77□□□□□ -0.69
SRRM1-220ENST00000496882 SYTL4Q96C24 671 aaPredicted RBP10.77□□□□□ -0.69
SRRM1-220ENST00000496882 CARD14Q9BXL6 1004 aa10.77□□□□□ -0.69
SRRM1-220ENST00000496882 SPON1Q9HCB6 807 aa10.77□□□□□ -0.69
SRRM1-220ENST00000496882 NHSQ6T4R5 1651 aa10.76□□□□□ -0.69
SRRM1-220ENST00000496882 GSE1Q14687 1217 aa10.76□□□□□ -0.69
SRRM1-220ENST00000496882 SRCAPQ6ZRS2 3230 aa10.76□□□□□ -0.69
SRRM1-220ENST00000496882 HSP90AB2PQ58FF8 381 aa10.75□□□□□ -0.69
SRRM1-220ENST00000496882 NBPF6Q5VWK0 638 aa10.75□□□□□ -0.69
SRRM1-220ENST00000496882 HS6ST3Q8IZP7 471 aa10.75□□□□□ -0.69
SRRM1-220ENST00000496882 USHBP1Q8N6Y0 703 aa10.75□□□□□ -0.69
SRRM1-220ENST00000496882 NBPF4Q96M43 638 aa10.75□□□□□ -0.69
SRRM1-220ENST00000496882 EMILIN1Q9Y6C2 1016 aa10.75□□□□□ -0.69
SRRM1-220ENST00000496882 SLC15A2Q16348 729 aa10.74□□□□□ -0.69
SRRM1-220ENST00000496882 ANO8Q9HCE9 1232 aaPredicted RBP10.74□□□□□ -0.69
SRRM1-220ENST00000496882 PCDH11XQ9BZA7 1347 aa10.74□□□□□ -0.69
SRRM1-220ENST00000496882 PCDH11YQ9BZA8 1340 aa10.74□□□□□ -0.69
SRRM1-220ENST00000496882 MEGF6O75095 1541 aa10.74□□□□□ -0.69
SRRM1-220ENST00000496882 TNNT2P45379 298 aaPredicted RBP10.73□□□□□ -0.69
SRRM1-220ENST00000496882 PANK3Q9H999 370 aa10.73□□□□□ -0.69
SRRM1-220ENST00000496882 KAT6BQ8WYB5 2073 aa10.72□□□□□ -0.69
SRRM1-220ENST00000496882 HMGB2P26583 209 aaKnown RBP10.72□□□□□ -0.69
SRRM1-220ENST00000496882 PRIM1P49642 420 aaKnown RBP10.72□□□□□ -0.69
SRRM1-220ENST00000496882 SLC27A3Q5K4L6 730 aa10.72□□□□□ -0.69
SRRM1-220ENST00000496882 KNSTRNQ9Y448 316 aa10.72□□□□□ -0.69
SRRM1-220ENST00000496882 WASHC2AQ641Q2 1341 aa10.72□□□□□ -0.69
SRRM1-220ENST00000496882 NSD2O96028 1365 aa10.72□□□□□ -0.69
SRRM1-220ENST00000496882 BTAF1O14981 1849 aa10.71□□□□□ -0.69
SRRM1-220ENST00000496882 RGPD2P0DJD1 1756 aa10.71□□□□□ -0.69
SRRM1-220ENST00000496882 SPG7Q9UQ90 795 aa10.71□□□□□ -0.69
SRRM1-220ENST00000496882 ZBTB7AO95365 584 aa10.7□□□□□ -0.7
SRRM1-220ENST00000496882 MORC1Q86VD1 984 aa10.7□□□□□ -0.7
SRRM1-220ENST00000496882 POLKQ9UBT6 870 aa10.7□□□□□ -0.7
SRRM1-220ENST00000496882 MTFR1LQ9H019 292 aa10.69□□□□□ -0.7
SRRM1-220ENST00000496882 DOT1LQ8TEK3 1739 aa10.69□□□□□ -0.7
SRRM1-220ENST00000496882 ANKRD26Q9UPS8 1709 aa10.68□□□□□ -0.7
SRRM1-220ENST00000496882 TFCP2L1Q9NZI6 479 aa10.68□□□□□ -0.7
SRRM1-220ENST00000496882 CCNL1Q9UK58 526 aaPredicted RBP10.68□□□□□ -0.7
SRRM1-220ENST00000496882 SMARCC1Q92922 1105 aaPredicted RBP10.67□□□□□ -0.7
SRRM1-220ENST00000496882 EYA1Q99502 592 aa10.67□□□□□ -0.7
SRRM1-220ENST00000496882 LRRC4BQ9NT99 713 aa10.67□□□□□ -0.7
SRRM1-220ENST00000496882 MAP2P11137 1827 aaKnown RBP10.67□□□□□ -0.7
SRRM1-220ENST00000496882 EIF4A2Q14240 407 aaKnown RBP10.66□□□□□ -0.7
SRRM1-220ENST00000496882 ZNF827Q17R98 1081 aa10.66□□□□□ -0.7
SRRM1-220ENST00000496882 DCAF8Q5TAQ9 597 aa10.66□□□□□ -0.7
SRRM1-220ENST00000496882 MPRIPQ6WCQ1 1025 aa10.66□□□□□ -0.7
SRRM1-220ENST00000496882 IFNL2Q8IZJ0 200 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms