RNA–Protein interactions for RNA: ENST00000496843.1

PALMD-202, Transcript of palmdelphin, humanhuman

TSL 1 (best)

Gene PALMD, Length 5,294 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALMD-202ENST00000496843 BUB1BO60566 1050 aaPredicted RBP6.38□□□□□ -1.39
PALMD-202ENST00000496843 MCM5P33992 734 aa6.38□□□□□ -1.39
PALMD-202ENST00000496843 TAF7Q15545 349 aaPredicted RBP6.38□□□□□ -1.39
PALMD-202ENST00000496843 TBC1D10BQ4KMP7 808 aaPredicted RBP6.38□□□□□ -1.39
PALMD-202ENST00000496843 APLFQ8IW19 511 aaPredicted RBP6.38□□□□□ -1.39
PALMD-202ENST00000496843 TAF4BQ92750 862 aa6.38□□□□□ -1.39
PALMD-202ENST00000496843 TAOK3Q9H2K8 898 aa6.38□□□□□ -1.39
PALMD-202ENST00000496843 ATG3Q9NT62 314 aa6.38□□□□□ -1.39
PALMD-202ENST00000496843 MKRN1Q9UHC7 482 aaKnown RBP6.38□□□□□ -1.39
PALMD-202ENST00000496843 TPX2Q9ULW0 747 aaKnown RBP6.38□□□□□ -1.39
PALMD-202ENST00000496843 CETN3O15182 167 aa6.38□□□□□ -1.39
PALMD-202ENST00000496843 CHGAP10645 457 aaKnown RBP6.38□□□□□ -1.39
PALMD-202ENST00000496843 TRIM21P19474 475 aaKnown RBP6.38□□□□□ -1.39
PALMD-202ENST00000496843 TPD52P55327 224 aaPredicted RBP6.38□□□□□ -1.39
PALMD-202ENST00000496843 TTC19Q6DKK2 380 aaPredicted RBP6.38□□□□□ -1.39
PALMD-202ENST00000496843 CBFA2T2O43439 604 aa6.37□□□□□ -1.39
PALMD-202ENST00000496843 CCDC192P0DO97 292 aa6.37□□□□□ -1.39
PALMD-202ENST00000496843 PSMD6Q15008 389 aa6.37□□□□□ -1.39
PALMD-202ENST00000496843 AMOTQ4VCS5 1084 aa6.37□□□□□ -1.39
PALMD-202ENST00000496843 PAIP2BQ9ULR5 123 aaKnown RBP6.37□□□□□ -1.39
PALMD-202ENST00000496843 SH3BP5O60239 455 aa6.37□□□□□ -1.39
PALMD-202ENST00000496843 NLRP5P59047 1200 aa6.37□□□□□ -1.39
PALMD-202ENST00000496843 ATRIPQ8WXE1 791 aa6.37□□□□□ -1.39
PALMD-202ENST00000496843 PPP1R9BQ96SB3 815 aa6.37□□□□□ -1.39
PALMD-202ENST00000496843 MTUS1Q9ULD2 1270 aa6.37□□□□□ -1.39
PALMD-202ENST00000496843 SMC3Q9UQE7 1217 aa6.37□□□□□ -1.39
PALMD-202ENST00000496843 KIF7Q2M1P5 1343 aa6.37□□□□□ -1.39
PALMD-202ENST00000496843 URI1O94763 535 aaPredicted RBP6.37□□□□□ -1.39
PALMD-202ENST00000496843 BASP1P80723 227 aaKnown RBP6.37□□□□□ -1.39
PALMD-202ENST00000496843 COG7P83436 770 aa6.37□□□□□ -1.39
PALMD-202ENST00000496843 MXRA7P84157 204 aa6.37□□□□□ -1.39
PALMD-202ENST00000496843 ARHGAP29Q52LW3 1261 aa6.37□□□□□ -1.39
PALMD-202ENST00000496843 ZNF280CQ8ND82 737 aa6.37□□□□□ -1.39
PALMD-202ENST00000496843 BCL2L13Q9BXK5 485 aa6.37□□□□□ -1.39
PALMD-202ENST00000496843 TRIM55Q9BYV6 548 aa6.37□□□□□ -1.39
PALMD-202ENST00000496843 VCX3AQ9NNX9 186 aa6.37□□□□□ -1.39
PALMD-202ENST00000496843 PALMDQ9NP74 551 aa6.37□□□□□ -1.39
PALMD-202ENST00000496843 ZSCAN12O43309 604 aa6.36□□□□□ -1.39
PALMD-202ENST00000496843 SERPINC1P01008 464 aa6.36□□□□□ -1.39
PALMD-202ENST00000496843 TRIM60Q495X7 471 aa6.36□□□□□ -1.39
PALMD-202ENST00000496843 TMEM57Q8N5G2 664 aa6.36□□□□□ -1.39
PALMD-202ENST00000496843 ZCRB1Q8TBF4 217 aaKnown RBP6.36□□□□□ -1.39
PALMD-202ENST00000496843 ANKRD24Q8TF21 1146 aa6.36□□□□□ -1.39
PALMD-202ENST00000496843 EFCC1Q9HA90 598 aa6.36□□□□□ -1.39
PALMD-202ENST00000496843 VEZTQ9HBM0 779 aa6.36□□□□□ -1.39
PALMD-202ENST00000496843 ATP11AP98196 1134 aa6.36□□□□□ -1.39
PALMD-202ENST00000496843 XPCQ01831 940 aaPredicted RBP6.36□□□□□ -1.39
PALMD-202ENST00000496843 SPATS2Q86XZ4 545 aaKnown RBP6.36□□□□□ -1.39
PALMD-202ENST00000496843 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.36□□□□□ -1.39
PALMD-202ENST00000496843 EIF2AQ9BY44 585 aaKnown RBP6.36□□□□□ -1.39
PALMD-202ENST00000496843 MAGEC2Q9UBF1 373 aaPredicted RBP6.36□□□□□ -1.39
PALMD-202ENST00000496843 KIF5CO60282 957 aa6.36□□□□□ -1.39
PALMD-202ENST00000496843 USO1O60763 962 aaKnown RBP6.36□□□□□ -1.39
PALMD-202ENST00000496843 KINO60870 393 aaKnown RBP6.36□□□□□ -1.39
PALMD-202ENST00000496843 REC8O95072 547 aa6.36□□□□□ -1.39
PALMD-202ENST00000496843 MAP4K4O95819 1239 aaPredicted RBP6.36□□□□□ -1.39
PALMD-202ENST00000496843 CSB-PGBD3P0DP91 1061 aa6.36□□□□□ -1.39
PALMD-202ENST00000496843 PSMD7P51665 324 aa6.36□□□□□ -1.39
PALMD-202ENST00000496843 ZKSCAN8Q15776 578 aaPredicted RBP6.36□□□□□ -1.39
PALMD-202ENST00000496843 CFAP58Q5T655 872 aa6.36□□□□□ -1.39
PALMD-202ENST00000496843 WWC2Q6AWC2 1192 aa6.36□□□□□ -1.39
PALMD-202ENST00000496843 PPP4R4Q6NUP7 873 aa6.36□□□□□ -1.39
PALMD-202ENST00000496843 SELENOSQ9BQE4 189 aa6.36□□□□□ -1.39
PALMD-202ENST00000496843 OGFRQ9NZT2 677 aa6.36□□□□□ -1.39
PALMD-202ENST00000496843 CLCN1P35523 988 aa6.36□□□□□ -1.39
PALMD-202ENST00000496843 HSP90AA5PQ58FG0 334 aa6.36□□□□□ -1.39
PALMD-202ENST00000496843 NBPF6Q5VWK0 638 aa6.36□□□□□ -1.39
PALMD-202ENST00000496843 NBPF5PQ86XG9 351 aaPredicted RBP6.36□□□□□ -1.39
PALMD-202ENST00000496843 KCTD17Q8N5Z5 321 aa6.36□□□□□ -1.39
PALMD-202ENST00000496843 CNKSR2Q8WXI2 1034 aa6.36□□□□□ -1.39
PALMD-202ENST00000496843 ATP2A3Q93084 1043 aa6.36□□□□□ -1.39
PALMD-202ENST00000496843 ABTB1Q969K4 478 aaPredicted RBP6.36□□□□□ -1.39
PALMD-202ENST00000496843 NBPF4Q96M43 638 aa6.36□□□□□ -1.39
PALMD-202ENST00000496843 PCYT1AP49585 367 aa6.35□□□□□ -1.39
PALMD-202ENST00000496843 SYNE3Q6ZMZ3 975 aa6.35□□□□□ -1.39
PALMD-202ENST00000496843 NBPF11Q86T75 865 aa6.35□□□□□ -1.39
PALMD-202ENST00000496843 NUB1Q9Y5A7 615 aa6.35□□□□□ -1.39
PALMD-202ENST00000496843 SPAG9O60271 1321 aaKnown RBP6.35□□□□□ -1.39
PALMD-202ENST00000496843 PPP1R12AO14974 1030 aaPredicted RBP6.35□□□□□ -1.39
PALMD-202ENST00000496843 GBP1P32455 592 aa6.35□□□□□ -1.39
PALMD-202ENST00000496843 IMMTQ16891 758 aaKnown RBP6.35□□□□□ -1.39
PALMD-202ENST00000496843 MPNDQ8N594 471 aa6.35□□□□□ -1.39
PALMD-202ENST00000496843 JADE2Q9NQC1 790 aa6.35□□□□□ -1.39
PALMD-202ENST00000496843 WDR70Q9NW82 654 aa6.35□□□□□ -1.39
PALMD-202ENST00000496843 ODF2LQ9ULJ1 636 aa6.35□□□□□ -1.39
PALMD-202ENST00000496843 ZNF513Q8N8E2 541 aaPredicted RBP6.35□□□□□ -1.39
PALMD-202ENST00000496843 FRMD4BQ9Y2L6 1034 aa6.35□□□□□ -1.39
PALMD-202ENST00000496843 CREB3O43889 395 aa6.35□□□□□ -1.39
PALMD-202ENST00000496843 INPP5BP32019 993 aa6.35□□□□□ -1.39
PALMD-202ENST00000496843 GABPB1Q06547 395 aaPredicted RBP6.35□□□□□ -1.39
PALMD-202ENST00000496843 AIMP1Q12904 312 aaKnown RBP6.35□□□□□ -1.39
PALMD-202ENST00000496843 TMCO4Q5TGY1 634 aa6.35□□□□□ -1.39
PALMD-202ENST00000496843 KRBA2Q6ZNG9 492 aa6.35□□□□□ -1.39
PALMD-202ENST00000496843 RALYLQ86SE5 291 aaKnown RBP6.35□□□□□ -1.39
PALMD-202ENST00000496843 PHLDB2Q86SQ0 1253 aa6.35□□□□□ -1.39
PALMD-202ENST00000496843 USP37Q86T82 979 aa6.35□□□□□ -1.39
PALMD-202ENST00000496843 CACTINQ8WUQ7 758 aaKnown RBP6.35□□□□□ -1.39
PALMD-202ENST00000496843 IFT74Q96LB3 600 aa6.35□□□□□ -1.39
PALMD-202ENST00000496843 IQCGQ9H095 443 aaKnown RBP6.35□□□□□ -1.39
PALMD-202ENST00000496843 CWC22Q9HCG8 908 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms