RNA–Protein interactions for RNA: ENST00000496728.1

TSC22D4-206, Transcript of TSC22 domain family member 4, humanhuman

TSL 3

Gene TSC22D4, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-206ENST00000496728 SULT6B1Q6IMI4 303 aa27.16■■□□□ 1.94
TSC22D4-206ENST00000496728 SPG7Q9UQ90 795 aa27.15■■□□□ 1.94
TSC22D4-206ENST00000496728 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.13■■□□□ 1.93
TSC22D4-206ENST00000496728 NUDCQ9Y266 331 aa27.13■■□□□ 1.93
TSC22D4-206ENST00000496728 BCL9O00512 1426 aa27.13■■□□□ 1.93
TSC22D4-206ENST00000496728 U2SURPO15042 1029 aaKnown RBP27.12■■□□□ 1.93
TSC22D4-206ENST00000496728 AEBP1Q8IUX7 1158 aa27.12■■□□□ 1.93
TSC22D4-206ENST00000496728 PCDH11XQ9BZA7 1347 aa27.12■■□□□ 1.93
TSC22D4-206ENST00000496728 PCDH11YQ9BZA8 1340 aa27.12■■□□□ 1.93
TSC22D4-206ENST00000496728 EP400Q96L91 3159 aa27.11■■□□□ 1.93
TSC22D4-206ENST00000496728 COL3A1P02461 1466 aaPredicted RBP27.1■■□□□ 1.93
TSC22D4-206ENST00000496728 HMOX1P09601 288 aa27.09■■□□□ 1.93
TSC22D4-206ENST00000496728 BAG6P46379 1132 aa27.09■■□□□ 1.93
TSC22D4-206ENST00000496728 PLEKHO1Q53GL0 409 aaPredicted RBP27.09■■□□□ 1.93
TSC22D4-206ENST00000496728 PRKRIP1Q9H875 184 aaPredicted RBP27.09■■□□□ 1.93
TSC22D4-206ENST00000496728 MYBBP1AQ9BQG0 1328 aaKnown RBP27.09■■□□□ 1.93
TSC22D4-206ENST00000496728 KDRP35968 1356 aa27.09■■□□□ 1.93
TSC22D4-206ENST00000496728 PLEKHG2Q9H7P9 1386 aa27.09■■□□□ 1.93
TSC22D4-206ENST00000496728 APBA3O96018 575 aa27.07■■□□□ 1.92
TSC22D4-206ENST00000496728 AMOTQ4VCS5 1084 aa27.07■■□□□ 1.92
TSC22D4-206ENST00000496728 BCL11BQ9C0K0 894 aaPredicted RBP27.07■■□□□ 1.92
TSC22D4-206ENST00000496728 CYP27B1O15528 508 aa27.06■■□□□ 1.92
TSC22D4-206ENST00000496728 ACSBG1Q96GR2 724 aa27.06■■□□□ 1.92
TSC22D4-206ENST00000496728 DEFB132Q7Z7B7 95 aa27.05■■□□□ 1.92
TSC22D4-206ENST00000496728 RGPD1P0DJD0 1748 aa27.03■■□□□ 1.92
TSC22D4-206ENST00000496728 U2AF1L5P0DN76 240 aaPredicted RBP27.03■■□□□ 1.92
TSC22D4-206ENST00000496728 U2AF1Q01081 240 aaKnown RBP eCLIP27.03■■□□□ 1.92
TSC22D4-206ENST00000496728 IFNL2Q8IZJ0 200 aa27.03■■□□□ 1.92
TSC22D4-206ENST00000496728 KCNQ2O43526 872 aa27.02■■□□□ 1.92
TSC22D4-206ENST00000496728 ZNF530Q6P9A1 599 aaPredicted RBP27.01■■□□□ 1.91
TSC22D4-206ENST00000496728 PHKG2P15735 406 aa27■■□□□ 1.91
TSC22D4-206ENST00000496728 EN1Q05925 392 aaPredicted RBP27■■□□□ 1.91
TSC22D4-206ENST00000496728 PTF1AQ7RTS3 328 aa27■■□□□ 1.91
TSC22D4-206ENST00000496728 ANP32CO43423 234 aa26.99■■□□□ 1.91
TSC22D4-206ENST00000496728 PRIM1P49642 420 aaKnown RBP26.99■■□□□ 1.91
TSC22D4-206ENST00000496728 NKX1-1Q15270 411 aaPredicted RBP26.99■■□□□ 1.91
TSC22D4-206ENST00000496728 C1orf141Q5JVX7 400 aa26.99■■□□□ 1.91
TSC22D4-206ENST00000496728 SYTL4Q96C24 671 aaPredicted RBP26.99■■□□□ 1.91
TSC22D4-206ENST00000496728 PKD1L3Q7Z443 1732 aa26.97■■□□□ 1.91
TSC22D4-206ENST00000496728 HSP90AB1P08238 724 aaKnown RBP26.97■■□□□ 1.91
TSC22D4-206ENST00000496728 FCHSD2O94868 740 aa26.96■■□□□ 1.91
TSC22D4-206ENST00000496728 SHANK3Q9BYB0 1731 aa26.96■■□□□ 1.91
TSC22D4-206ENST00000496728 PLSCR1O15162 318 aa26.95■■□□□ 1.9
TSC22D4-206ENST00000496728 RSPH6AQ9H0K4 717 aa26.95■■□□□ 1.9
TSC22D4-206ENST00000496728 PRKAR2BP31323 418 aa26.94■■□□□ 1.9
TSC22D4-206ENST00000496728 CAMKK2Q96RR4 588 aa26.94■■□□□ 1.9
TSC22D4-206ENST00000496728 EZH2Q15910 746 aaKnown RBP26.93■■□□□ 1.9
TSC22D4-206ENST00000496728 MTHFSDQ2M296 383 aaKnown RBP26.92■■□□□ 1.9
TSC22D4-206ENST00000496728 AKAP4Q5JQC9 854 aa26.92■■□□□ 1.9
TSC22D4-206ENST00000496728 DCAF5Q96JK2 942 aa26.92■■□□□ 1.9
TSC22D4-206ENST00000496728 TNS1Q9HBL0 1735 aaKnown RBP26.92■■□□□ 1.9
TSC22D4-206ENST00000496728 SBF2Q86WG5 1849 aa26.92■■□□□ 1.9
TSC22D4-206ENST00000496728 GAS2L2Q8NHY3 880 aa26.9■■□□□ 1.9
TSC22D4-206ENST00000496728 PNNQ9H307 717 aaKnown RBP26.9■■□□□ 1.9
TSC22D4-206ENST00000496728 NEFMP07197 916 aa26.89■■□□□ 1.9
TSC22D4-206ENST00000496728 MPRIPQ6WCQ1 1025 aa26.89■■□□□ 1.9
TSC22D4-206ENST00000496728 NHSQ6T4R5 1651 aa26.89■■□□□ 1.89
TSC22D4-206ENST00000496728 KAT6BQ8WYB5 2073 aa26.87■■□□□ 1.89
TSC22D4-206ENST00000496728 ERVV-2B6SEH9 535 aa26.87■■□□□ 1.89
TSC22D4-206ENST00000496728 WDR43Q15061 677 aaKnown RBP eCLIP26.87■■□□□ 1.89
TSC22D4-206ENST00000496728 PHACTR3Q96KR7 559 aa26.87■■□□□ 1.89
TSC22D4-206ENST00000496728 TMOD3Q9NYL9 352 aa26.87■■□□□ 1.89
TSC22D4-206ENST00000496728 PIGBQ92521 554 aa26.84■■□□□ 1.89
TSC22D4-206ENST00000496728 DOT1LQ8TEK3 1739 aa26.84■■□□□ 1.89
TSC22D4-206ENST00000496728 CABP4P57796 275 aa26.83■■□□□ 1.89
TSC22D4-206ENST00000496728 TXNRD1Q16881 649 aa26.83■■□□□ 1.89
TSC22D4-206ENST00000496728 GNAT3A8MTJ3 354 aa26.82■■□□□ 1.88
TSC22D4-206ENST00000496728 PROM2Q8N271 834 aa26.81■■□□□ 1.88
TSC22D4-206ENST00000496728 SMARCC1Q92922 1105 aaPredicted RBP26.81■■□□□ 1.88
TSC22D4-206ENST00000496728 KDM6AO15550 1401 aaPredicted RBP26.81■■□□□ 1.88
TSC22D4-206ENST00000496728 RNMTO43148 476 aaKnown RBP26.8■■□□□ 1.88
TSC22D4-206ENST00000496728 PLEKHF1Q96S99 279 aa26.8■■□□□ 1.88
TSC22D4-206ENST00000496728 MAPK8IP3Q9UPT6 1336 aa26.8■■□□□ 1.88
TSC22D4-206ENST00000496728 LGR6Q9HBX8 967 aa26.79■■□□□ 1.88
TSC22D4-206ENST00000496728 MAP3K5Q99683 1374 aa26.79■■□□□ 1.88
TSC22D4-206ENST00000496728 NBPF14Q5TI25 921 aa26.78■■□□□ 1.88
TSC22D4-206ENST00000496728 BTAF1O14981 1849 aa26.78■■□□□ 1.88
TSC22D4-206ENST00000496728 SLC27A3Q5K4L6 730 aa26.77■■□□□ 1.88
TSC22D4-206ENST00000496728 ADAMTS8Q9UP79 889 aa26.77■■□□□ 1.88
TSC22D4-206ENST00000496728 NFATC2IPQ8NCF5 419 aa26.76■■□□□ 1.87
TSC22D4-206ENST00000496728 RTF1Q92541 710 aaKnown RBP26.76■■□□□ 1.87
TSC22D4-206ENST00000496728 TOGARAM1Q9Y4F4 1720 aa26.76■■□□□ 1.87
TSC22D4-206ENST00000496728 CCDC184Q52MB2 194 aa26.75■■□□□ 1.87
TSC22D4-206ENST00000496728 SLC52A2Q9HAB3 445 aa26.75■■□□□ 1.87
TSC22D4-206ENST00000496728 MRS2Q9HD23 443 aa26.75■■□□□ 1.87
TSC22D4-206ENST00000496728 ASAP1Q9ULH1 1129 aa26.75■■□□□ 1.87
TSC22D4-206ENST00000496728 PALLDQ8WX93 1383 aa26.74■■□□□ 1.87
TSC22D4-206ENST00000496728 RGPD3A6NKT7 1758 aaPredicted RBP26.74■■□□□ 1.87
TSC22D4-206ENST00000496728 RGPD4Q7Z3J3 1758 aa26.74■■□□□ 1.87
TSC22D4-206ENST00000496728 IL17REQ8NFR9 667 aa26.73■■□□□ 1.87
TSC22D4-206ENST00000496728 ATG3Q9NT62 314 aa26.73■■□□□ 1.87
TSC22D4-206ENST00000496728 CCNL1Q9UK58 526 aaPredicted RBP26.73■■□□□ 1.87
TSC22D4-206ENST00000496728 HTATSF1O43719 755 aaKnown RBP26.72■■□□□ 1.87
TSC22D4-206ENST00000496728 TEFQ10587 303 aa26.72■■□□□ 1.87
TSC22D4-206ENST00000496728 NFE2L2Q16236 605 aa26.72■■□□□ 1.87
TSC22D4-206ENST00000496728 LRRC4BQ9NT99 713 aa26.72■■□□□ 1.87
TSC22D4-206ENST00000496728 HMGB2P26583 209 aaKnown RBP26.71■■□□□ 1.87
TSC22D4-206ENST00000496728 CCDC146Q8IYE0 955 aa26.71■■□□□ 1.87
TSC22D4-206ENST00000496728 RUNDC1Q96C34 613 aa26.71■■□□□ 1.87
TSC22D4-206ENST00000496728 ITGB4P16144 1822 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms