RNA–Protein interactions for RNA: ENST00000496636.1

SH3D21-204, Transcript of SH3 domain containing 21, humanhuman

TSL 3

Gene SH3D21, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-204ENST00000496636 ROCK2O75116 1388 aaKnown RBP13.83□□□□□ -0.19
SH3D21-204ENST00000496636 USP47Q96K76 1375 aa13.83□□□□□ -0.19
SH3D21-204ENST00000496636 PRIM1P49642 420 aaKnown RBP13.83□□□□□ -0.2
SH3D21-204ENST00000496636 NME9Q86XW9 330 aa13.83□□□□□ -0.2
SH3D21-204ENST00000496636 FLAD1Q8NFF5 587 aa13.83□□□□□ -0.2
SH3D21-204ENST00000496636 DOT1LQ8TEK3 1739 aa13.82□□□□□ -0.2
SH3D21-204ENST00000496636 HDGFL2Q7Z4V5 671 aaPredicted RBP13.82□□□□□ -0.2
SH3D21-204ENST00000496636 COL23A1Q86Y22 540 aaPredicted RBP13.82□□□□□ -0.2
SH3D21-204ENST00000496636 KAT6BQ8WYB5 2073 aa13.82□□□□□ -0.2
SH3D21-204ENST00000496636 KCNQ4P56696 695 aa13.81□□□□□ -0.2
SH3D21-204ENST00000496636 IP6K1Q92551 441 aa13.81□□□□□ -0.2
SH3D21-204ENST00000496636 CD163L1Q9NR16 1453 aa13.8□□□□□ -0.2
SH3D21-204ENST00000496636 MSL1Q68DK7 614 aa13.8□□□□□ -0.2
SH3D21-204ENST00000496636 ZCRB1Q8TBF4 217 aaKnown RBP13.79□□□□□ -0.2
SH3D21-204ENST00000496636 ZNF526Q8TF50 670 aaPredicted RBP13.79□□□□□ -0.2
SH3D21-204ENST00000496636 TERF2IPQ9NYB0 399 aa13.79□□□□□ -0.2
SH3D21-204ENST00000496636 CGNL1Q0VF96 1302 aa13.79□□□□□ -0.2
SH3D21-204ENST00000496636 NSD3Q9BZ95 1437 aa13.79□□□□□ -0.2
SH3D21-204ENST00000496636 APLP1P51693 650 aa13.78□□□□□ -0.2
SH3D21-204ENST00000496636 L3MBTL2Q969R5 705 aa13.78□□□□□ -0.2
SH3D21-204ENST00000496636 MEGF6O75095 1541 aa13.77□□□□□ -0.21
SH3D21-204ENST00000496636 A0A1W2PP64 1363 aa13.76□□□□□ -0.21
SH3D21-204ENST00000496636 RTL1A6NKG5 1358 aa13.76□□□□□ -0.21
SH3D21-204ENST00000496636 IGSF1Q8N6C5 1336 aa13.76□□□□□ -0.21
SH3D21-204ENST00000496636 TMC1Q8TDI8 760 aa13.76□□□□□ -0.21
SH3D21-204ENST00000496636 LTV1Q96GA3 475 aaPredicted RBP13.76□□□□□ -0.21
SH3D21-204ENST00000496636 C5P01031 1676 aa13.75□□□□□ -0.21
SH3D21-204ENST00000496636 CICQ96RK0 1608 aaPredicted RBP13.75□□□□□ -0.21
SH3D21-204ENST00000496636 PALLDQ8WX93 1383 aa13.75□□□□□ -0.21
SH3D21-204ENST00000496636 KIF3CO14782 793 aa13.75□□□□□ -0.21
SH3D21-204ENST00000496636 MAP3K19Q56UN5 1328 aa13.74□□□□□ -0.21
SH3D21-204ENST00000496636 HOXC9P31274 260 aa13.74□□□□□ -0.21
SH3D21-204ENST00000496636 SMG6Q86US8 1419 aaKnown RBP13.73□□□□□ -0.21
SH3D21-204ENST00000496636 AMPHP49418 695 aa13.73□□□□□ -0.21
SH3D21-204ENST00000496636 RAPGEF4Q8WZA2 1011 aa13.73□□□□□ -0.21
SH3D21-204ENST00000496636 AK7Q96M32 723 aa13.73□□□□□ -0.21
SH3D21-204ENST00000496636 PUS7Q96PZ0 661 aaKnown RBP13.73□□□□□ -0.21
SH3D21-204ENST00000496636 PCDH11XQ9BZA7 1347 aa13.72□□□□□ -0.21
SH3D21-204ENST00000496636 PCDH11YQ9BZA8 1340 aa13.72□□□□□ -0.21
SH3D21-204ENST00000496636 TOMM70O94826 608 aa13.72□□□□□ -0.21
SH3D21-204ENST00000496636 SMARCC1Q92922 1105 aaPredicted RBP13.72□□□□□ -0.21
SH3D21-204ENST00000496636 COG3Q96JB2 828 aa13.72□□□□□ -0.21
SH3D21-204ENST00000496636 SLC12A5Q9H2X9 1139 aa13.72□□□□□ -0.21
SH3D21-204ENST00000496636 C4BP0C0L5 1744 aa13.7□□□□□ -0.22
SH3D21-204ENST00000496636 SSFA2P28290 1259 aa13.7□□□□□ -0.22
SH3D21-204ENST00000496636 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.69□□□□□ -0.22
SH3D21-204ENST00000496636 TATP17735 454 aaPredicted RBP13.69□□□□□ -0.22
SH3D21-204ENST00000496636 DNAJC5GQ8N7S2 189 aa13.68□□□□□ -0.22
SH3D21-204ENST00000496636 CARD11Q9BXL7 1154 aa13.68□□□□□ -0.22
SH3D21-204ENST00000496636 TOGARAM1Q9Y4F4 1720 aa13.67□□□□□ -0.22
SH3D21-204ENST00000496636 PHF14O94880 888 aa13.67□□□□□ -0.22
SH3D21-204ENST00000496636 NBPF6Q5VWK0 638 aa13.67□□□□□ -0.22
SH3D21-204ENST00000496636 MPRIPQ6WCQ1 1025 aa13.67□□□□□ -0.22
SH3D21-204ENST00000496636 NBPF4Q96M43 638 aa13.67□□□□□ -0.22
SH3D21-204ENST00000496636 WWC3Q9ULE0 1092 aa13.67□□□□□ -0.22
SH3D21-204ENST00000496636 TAF1LQ8IZX4 1826 aa13.67□□□□□ -0.22
SH3D21-204ENST00000496636 KIF24Q5T7B8 1368 aa13.66□□□□□ -0.22
SH3D21-204ENST00000496636 PLEKHG2Q9H7P9 1386 aa13.66□□□□□ -0.22
SH3D21-204ENST00000496636 PXDNLA1KZ92 1463 aa13.66□□□□□ -0.22
SH3D21-204ENST00000496636 RBM46Q8TBY0 533 aaKnown RBP13.65□□□□□ -0.22
SH3D21-204ENST00000496636 UBR3Q6ZT12 1888 aa13.64□□□□□ -0.23
SH3D21-204ENST00000496636 INSRP06213 1382 aa13.64□□□□□ -0.23
SH3D21-204ENST00000496636 SLC24A1O60721 1099 aa13.64□□□□□ -0.23
SH3D21-204ENST00000496636 TGFB2P61812 414 aa13.64□□□□□ -0.23
SH3D21-204ENST00000496636 AMIGO3Q86WK7 504 aa13.64□□□□□ -0.23
SH3D21-204ENST00000496636 USHBP1Q8N6Y0 703 aa13.64□□□□□ -0.23
SH3D21-204ENST00000496636 FLT4P35916 1363 aa13.63□□□□□ -0.23
SH3D21-204ENST00000496636 C16orf71Q8IYS4 520 aaPredicted RBP13.63□□□□□ -0.23
SH3D21-204ENST00000496636 JMYQ8N9B5 988 aa13.63□□□□□ -0.23
SH3D21-204ENST00000496636 KLRG1Q96E93 195 aa13.63□□□□□ -0.23
SH3D21-204ENST00000496636 WDR90Q96KV7 1748 aa13.63□□□□□ -0.23
SH3D21-204ENST00000496636 C10orf71Q711Q0 1435 aa13.63□□□□□ -0.23
SH3D21-204ENST00000496636 LOC102724428A0A0B4J2F2 783 aa13.62□□□□□ -0.23
SH3D21-204ENST00000496636 GNPATO15228 680 aa13.62□□□□□ -0.23
SH3D21-204ENST00000496636 CYP27B1O15528 508 aa13.62□□□□□ -0.23
SH3D21-204ENST00000496636 MMP10P09238 476 aa13.62□□□□□ -0.23
SH3D21-204ENST00000496636 SIK1P57059 783 aa13.62□□□□□ -0.23
SH3D21-204ENST00000496636 FSTL1Q12841 308 aa13.62□□□□□ -0.23
SH3D21-204ENST00000496636 RRS1Q15050 365 aaKnown RBP13.62□□□□□ -0.23
SH3D21-204ENST00000496636 BCS1LQ9Y276 419 aa13.62□□□□□ -0.23
SH3D21-204ENST00000496636 RGPD2P0DJD1 1756 aa13.62□□□□□ -0.23
SH3D21-204ENST00000496636 PCNTO95613 3336 aa13.61□□□□□ -0.23
SH3D21-204ENST00000496636 SIN3AQ96ST3 1273 aa13.61□□□□□ -0.23
SH3D21-204ENST00000496636 NMRK2Q9NPI5 230 aa13.61□□□□□ -0.23
SH3D21-204ENST00000496636 NEUROD1Q13562 356 aa13.6□□□□□ -0.23
SH3D21-204ENST00000496636 NKX1-1Q15270 411 aaPredicted RBP13.6□□□□□ -0.23
SH3D21-204ENST00000496636 PKD1L3Q7Z443 1732 aa13.6□□□□□ -0.23
SH3D21-204ENST00000496636 LINC00116Q8NCU8 138 aa13.6□□□□□ -0.23
SH3D21-204ENST00000496636 PIGBQ92521 554 aa13.6□□□□□ -0.23
SH3D21-204ENST00000496636 FBLN1P23142 703 aa13.59□□□□□ -0.23
SH3D21-204ENST00000496636 COL13A1Q5TAT6 717 aaPredicted RBP13.59□□□□□ -0.23
SH3D21-204ENST00000496636 TNS4Q8IZW8 715 aa13.59□□□□□ -0.23
SH3D21-204ENST00000496636 NLGN1Q8N2Q7 840 aa13.59□□□□□ -0.23
SH3D21-204ENST00000496636 TMOD3Q9NYL9 352 aa13.59□□□□□ -0.23
SH3D21-204ENST00000496636 KIF13BQ9NQT8 1826 aa13.59□□□□□ -0.23
SH3D21-204ENST00000496636 KDM2BQ8NHM5 1336 aa13.59□□□□□ -0.23
SH3D21-204ENST00000496636 NCAPD2Q15021 1401 aa13.58□□□□□ -0.24
SH3D21-204ENST00000496636 ADRA2BP18089 450 aa13.58□□□□□ -0.24
SH3D21-204ENST00000496636 PRELPP51888 382 aa13.58□□□□□ -0.24
SH3D21-204ENST00000496636 ARHGAP27Q6ZUM4 889 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms