RNA–Protein interactions for RNA: ENST00000496633.1

CDHR3-214, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 949 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-214ENST00000496633 NBPF6Q5VWK0 638 aa10.28□□□□□ -0.76
CDHR3-214ENST00000496633 NBPF4Q96M43 638 aa10.28□□□□□ -0.76
CDHR3-214ENST00000496633 PEAK1Q9H792 1746 aa10.27□□□□□ -0.76
CDHR3-214ENST00000496633 TNS1Q9HBL0 1735 aaKnown RBP10.27□□□□□ -0.76
CDHR3-214ENST00000496633 TNNT2P45379 298 aaPredicted RBP10.27□□□□□ -0.77
CDHR3-214ENST00000496633 FAM182BQ5T319 152 aa10.27□□□□□ -0.77
CDHR3-214ENST00000496633 NCAPD2Q15021 1401 aa10.26□□□□□ -0.77
CDHR3-214ENST00000496633 HSP90AB1P08238 724 aaKnown RBP10.26□□□□□ -0.77
CDHR3-214ENST00000496633 FBLN1P23142 703 aa10.26□□□□□ -0.77
CDHR3-214ENST00000496633 AMOTQ4VCS5 1084 aa10.26□□□□□ -0.77
CDHR3-214ENST00000496633 DEFB132Q7Z7B7 95 aa10.26□□□□□ -0.77
CDHR3-214ENST00000496633 DDX54Q8TDD1 881 aaKnown RBP10.26□□□□□ -0.77
CDHR3-214ENST00000496633 CFAP53Q96M91 514 aa10.26□□□□□ -0.77
CDHR3-214ENST00000496633 SBF2Q86WG5 1849 aa10.26□□□□□ -0.77
CDHR3-214ENST00000496633 EN1Q05925 392 aaPredicted RBP10.25□□□□□ -0.77
CDHR3-214ENST00000496633 CAMKK2Q96RR4 588 aa10.25□□□□□ -0.77
CDHR3-214ENST00000496633 NHSQ6T4R5 1651 aa10.25□□□□□ -0.77
CDHR3-214ENST00000496633 EIF4A2Q14240 407 aaKnown RBP10.24□□□□□ -0.77
CDHR3-214ENST00000496633 CC2D1BQ5T0F9 858 aaKnown RBP10.24□□□□□ -0.77
CDHR3-214ENST00000496633 EYA1Q99502 592 aa10.24□□□□□ -0.77
CDHR3-214ENST00000496633 IGSF1Q8N6C5 1336 aa10.24□□□□□ -0.77
CDHR3-214ENST00000496633 DIAPH1O60610 1272 aaKnown RBP10.23□□□□□ -0.77
CDHR3-214ENST00000496633 MTHFSP49914 203 aa10.23□□□□□ -0.77
CDHR3-214ENST00000496633 PLEKHO1Q53GL0 409 aaPredicted RBP10.23□□□□□ -0.77
CDHR3-214ENST00000496633 SLC27A3Q5K4L6 730 aa10.23□□□□□ -0.77
CDHR3-214ENST00000496633 IFNL2Q8IZJ0 200 aa10.23□□□□□ -0.77
CDHR3-214ENST00000496633 NUDCQ9Y266 331 aa10.23□□□□□ -0.77
CDHR3-214ENST00000496633 MEGF6O75095 1541 aa10.23□□□□□ -0.77
CDHR3-214ENST00000496633 RGPD2P0DJD1 1756 aa10.22□□□□□ -0.77
CDHR3-214ENST00000496633 EZH2Q15910 746 aaKnown RBP10.22□□□□□ -0.77
CDHR3-214ENST00000496633 PKD1L3Q7Z443 1732 aa10.21□□□□□ -0.77
CDHR3-214ENST00000496633 KAT6BQ8WYB5 2073 aa10.21□□□□□ -0.77
CDHR3-214ENST00000496633 NKX1-1Q15270 411 aaPredicted RBP10.21□□□□□ -0.77
CDHR3-214ENST00000496633 USHBP1Q8N6Y0 703 aa10.21□□□□□ -0.77
CDHR3-214ENST00000496633 SMARCC1Q92922 1105 aaPredicted RBP10.21□□□□□ -0.77
CDHR3-214ENST00000496633 KDRP35968 1356 aa10.21□□□□□ -0.78
CDHR3-214ENST00000496633 RREB1Q92766 1687 aa10.21□□□□□ -0.78
CDHR3-214ENST00000496633 IL13P35225 146 aa10.2□□□□□ -0.78
CDHR3-214ENST00000496633 TXNRD1Q16881 649 aa10.2□□□□□ -0.78
CDHR3-214ENST00000496633 C1orf141Q5JVX7 400 aa10.2□□□□□ -0.78
CDHR3-214ENST00000496633 CNKSR2Q8WXI2 1034 aa10.2□□□□□ -0.78
CDHR3-214ENST00000496633 SYTL4Q96C24 671 aaPredicted RBP10.2□□□□□ -0.78
CDHR3-214ENST00000496633 ERVV-2B6SEH9 535 aa10.19□□□□□ -0.78
CDHR3-214ENST00000496633 NEFMP07197 916 aa10.19□□□□□ -0.78
CDHR3-214ENST00000496633 PRIM1P49642 420 aaKnown RBP10.19□□□□□ -0.78
CDHR3-214ENST00000496633 SULT6B1Q6IMI4 303 aa10.19□□□□□ -0.78
CDHR3-214ENST00000496633 ACSBG1Q96GR2 724 aa10.19□□□□□ -0.78
CDHR3-214ENST00000496633 DCAF5Q96JK2 942 aa10.19□□□□□ -0.78
CDHR3-214ENST00000496633 PNNQ9H307 717 aaKnown RBP10.19□□□□□ -0.78
CDHR3-214ENST00000496633 STK32BQ9NY57 414 aa10.19□□□□□ -0.78
CDHR3-214ENST00000496633 KCNQ2O43526 872 aa10.18□□□□□ -0.78
CDHR3-214ENST00000496633 PHKG2P15735 406 aa10.18□□□□□ -0.78
CDHR3-214ENST00000496633 RALBP1Q15311 655 aa10.18□□□□□ -0.78
CDHR3-214ENST00000496633 SHANK3Q9BYB0 1731 aa10.18□□□□□ -0.78
CDHR3-214ENST00000496633 BTAF1O14981 1849 aa10.17□□□□□ -0.78
CDHR3-214ENST00000496633 CYP27B1O15528 508 aa10.17□□□□□ -0.78
CDHR3-214ENST00000496633 TMOD3Q9NYL9 352 aa10.17□□□□□ -0.78
CDHR3-214ENST00000496633 NUP188Q5SRE5 1749 aa10.16□□□□□ -0.78
CDHR3-214ENST00000496633 DOT1LQ8TEK3 1739 aa10.16□□□□□ -0.78
CDHR3-214ENST00000496633 R3HDM1Q15032 1099 aaKnown RBP10.16□□□□□ -0.78
CDHR3-214ENST00000496633 AKAP4Q5JQC9 854 aa10.16□□□□□ -0.78
CDHR3-214ENST00000496633 ZNF530Q6P9A1 599 aaPredicted RBP10.16□□□□□ -0.78
CDHR3-214ENST00000496633 U2SURPO15042 1029 aaKnown RBP10.15□□□□□ -0.78
CDHR3-214ENST00000496633 PPP2R1AP30153 589 aa10.15□□□□□ -0.78
CDHR3-214ENST00000496633 SLC15A2Q16348 729 aa10.15□□□□□ -0.78
CDHR3-214ENST00000496633 MPRIPQ6WCQ1 1025 aa10.15□□□□□ -0.78
CDHR3-214ENST00000496633 FLAD1Q8NFF5 587 aa10.15□□□□□ -0.78
CDHR3-214ENST00000496633 GAS2L2Q8NHY3 880 aa10.15□□□□□ -0.78
CDHR3-214ENST00000496633 FCHSD2O94868 740 aa10.14□□□□□ -0.79
CDHR3-214ENST00000496633 CABP4P57796 275 aa10.14□□□□□ -0.79
CDHR3-214ENST00000496633 SLC16A10Q8TF71 515 aa10.14□□□□□ -0.79
CDHR3-214ENST00000496633 SPON1Q9HCB6 807 aa10.14□□□□□ -0.79
CDHR3-214ENST00000496633 CCNL1Q9UK58 526 aaPredicted RBP10.14□□□□□ -0.79
CDHR3-214ENST00000496633 LY75O60449 1722 aa10.13□□□□□ -0.79
CDHR3-214ENST00000496633 PROM2Q8N271 834 aa10.13□□□□□ -0.79
CDHR3-214ENST00000496633 LRP5O75197 1615 aa10.13□□□□□ -0.79
CDHR3-214ENST00000496633 PALLDQ8WX93 1383 aa10.13□□□□□ -0.79
CDHR3-214ENST00000496633 COL3A1P02461 1466 aaPredicted RBP10.12□□□□□ -0.79
CDHR3-214ENST00000496633 PSDA5PKW4 1024 aaPredicted RBP10.12□□□□□ -0.79
CDHR3-214ENST00000496633 DDX10Q13206 875 aaKnown RBP10.12□□□□□ -0.79
CDHR3-214ENST00000496633 CNGB1Q14028 1251 aaPredicted RBP10.12□□□□□ -0.79
CDHR3-214ENST00000496633 SRCAPQ6ZRS2 3230 aa10.12□□□□□ -0.79
CDHR3-214ENST00000496633 ITGB4P16144 1822 aa10.12□□□□□ -0.79
CDHR3-214ENST00000496633 HMOX1P09601 288 aa10.11□□□□□ -0.79
CDHR3-214ENST00000496633 U2AF1L5P0DN76 240 aaPredicted RBP10.11□□□□□ -0.79
CDHR3-214ENST00000496633 U2AF1Q01081 240 aaKnown RBP eCLIP10.11□□□□□ -0.79
CDHR3-214ENST00000496633 PTF1AQ7RTS3 328 aa10.11□□□□□ -0.79
CDHR3-214ENST00000496633 AEBP1Q8IUX7 1158 aa10.11□□□□□ -0.79
CDHR3-214ENST00000496633 PIGBQ92521 554 aa10.11□□□□□ -0.79
CDHR3-214ENST00000496633 TFCP2L1Q9NZI6 479 aa10.11□□□□□ -0.79
CDHR3-214ENST00000496633 MYBBP1AQ9BQG0 1328 aaKnown RBP10.1□□□□□ -0.79
CDHR3-214ENST00000496633 ZNF831Q5JPB2 1677 aa10.1□□□□□ -0.79
CDHR3-214ENST00000496633 GNAT3A8MTJ3 354 aa10.1□□□□□ -0.79
CDHR3-214ENST00000496633 HTATSF1O43719 755 aaKnown RBP10.1□□□□□ -0.79
CDHR3-214ENST00000496633 RTF1Q92541 710 aaKnown RBP10.1□□□□□ -0.79
CDHR3-214ENST00000496633 MTFR1LQ9H019 292 aa10.1□□□□□ -0.79
CDHR3-214ENST00000496633 QSER1Q2KHR3 1735 aa10.1□□□□□ -0.79
CDHR3-214ENST00000496633 PAPPAQ13219 1627 aa10.09□□□□□ -0.79
CDHR3-214ENST00000496633 LOC102724428A0A0B4J2F2 783 aa10.09□□□□□ -0.79
CDHR3-214ENST00000496633 DCAF8L1A6NGE4 600 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms