RNA–Protein interactions for RNA: ENST00000496569.1

HDLBP-246, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-246ENST00000496569 PARD3Q8TEW0 1356 aa16.84■□□□□ 0.29
HDLBP-246ENST00000496569 PKD1L3Q7Z443 1732 aa16.83■□□□□ 0.28
HDLBP-246ENST00000496569 ANO8Q9HCE9 1232 aaPredicted RBP16.83■□□□□ 0.28
HDLBP-246ENST00000496569 TOGARAM1Q9Y4F4 1720 aa16.82■□□□□ 0.28
HDLBP-246ENST00000496569 POLKQ9UBT6 870 aa16.82■□□□□ 0.28
HDLBP-246ENST00000496569 KIF24Q5T7B8 1368 aa16.81■□□□□ 0.28
HDLBP-246ENST00000496569 PROM2Q8N271 834 aa16.81■□□□□ 0.28
HDLBP-246ENST00000496569 ITGB4P16144 1822 aa16.8■□□□□ 0.28
HDLBP-246ENST00000496569 ZCRB1Q8TBF4 217 aaKnown RBP16.79■□□□□ 0.28
HDLBP-246ENST00000496569 CASZ1Q86V15 1759 aa16.79■□□□□ 0.28
HDLBP-246ENST00000496569 PAPPAQ13219 1627 aa16.78■□□□□ 0.28
HDLBP-246ENST00000496569 TUBGCP6Q96RT7 1819 aa16.78■□□□□ 0.28
HDLBP-246ENST00000496569 PLSCR1O15162 318 aa16.78■□□□□ 0.28
HDLBP-246ENST00000496569 TXNRD1Q16881 649 aa16.78■□□□□ 0.28
HDLBP-246ENST00000496569 NCAPD2Q15021 1401 aa16.78■□□□□ 0.28
HDLBP-246ENST00000496569 WASHC2AQ641Q2 1341 aa16.77■□□□□ 0.28
HDLBP-246ENST00000496569 TATP17735 454 aaPredicted RBP16.77■□□□□ 0.28
HDLBP-246ENST00000496569 CNGB1Q14028 1251 aaPredicted RBP16.77■□□□□ 0.28
HDLBP-246ENST00000496569 RAPGEF4Q8WZA2 1011 aa16.77■□□□□ 0.28
HDLBP-246ENST00000496569 LY75O60449 1722 aa16.76■□□□□ 0.27
HDLBP-246ENST00000496569 EIF4A2Q14240 407 aaKnown RBP16.76■□□□□ 0.27
HDLBP-246ENST00000496569 MORC1Q86VD1 984 aa16.76■□□□□ 0.27
HDLBP-246ENST00000496569 SYTL4Q96C24 671 aaPredicted RBP16.76■□□□□ 0.27
HDLBP-246ENST00000496569 EYA1Q99502 592 aa16.76■□□□□ 0.27
HDLBP-246ENST00000496569 NSD2O96028 1365 aa16.76■□□□□ 0.27
HDLBP-246ENST00000496569 PDGFDQ9GZP0 370 aaPredicted RBP16.75■□□□□ 0.27
HDLBP-246ENST00000496569 KNSTRNQ9Y448 316 aa16.75■□□□□ 0.27
HDLBP-246ENST00000496569 PRIM1P49642 420 aaKnown RBP16.74■□□□□ 0.27
HDLBP-246ENST00000496569 AMER1Q5JTC6 1135 aaPredicted RBP16.74■□□□□ 0.27
HDLBP-246ENST00000496569 NBPF14Q5TI25 921 aa16.74■□□□□ 0.27
HDLBP-246ENST00000496569 KCNQ4P56696 695 aa16.73■□□□□ 0.27
HDLBP-246ENST00000496569 CYP27B1O15528 508 aa16.72■□□□□ 0.27
HDLBP-246ENST00000496569 CC2D1BQ5T0F9 858 aaKnown RBP16.71■□□□□ 0.27
HDLBP-246ENST00000496569 LRRC4BQ9NT99 713 aa16.71■□□□□ 0.27
HDLBP-246ENST00000496569 PCDH11XQ9BZA7 1347 aa16.7■□□□□ 0.26
HDLBP-246ENST00000496569 PCDH11YQ9BZA8 1340 aa16.7■□□□□ 0.26
HDLBP-246ENST00000496569 PER1O15534 1290 aaPredicted RBP16.7■□□□□ 0.26
HDLBP-246ENST00000496569 VIRMAQ69YN4 1812 aaKnown RBP16.7■□□□□ 0.26
HDLBP-246ENST00000496569 TAF1LQ8IZX4 1826 aa16.7■□□□□ 0.26
HDLBP-246ENST00000496569 ZNF827Q17R98 1081 aa16.69■□□□□ 0.26
HDLBP-246ENST00000496569 IGSF1Q8N6C5 1336 aa16.69■□□□□ 0.26
HDLBP-246ENST00000496569 AEBP1Q8IUX7 1158 aa16.68■□□□□ 0.26
HDLBP-246ENST00000496569 C5P01031 1676 aa16.67■□□□□ 0.26
HDLBP-246ENST00000496569 STK32BQ9NY57 414 aa16.67■□□□□ 0.26
HDLBP-246ENST00000496569 QSER1Q2KHR3 1735 aa16.67■□□□□ 0.26
HDLBP-246ENST00000496569 ZBTB7AO95365 584 aa16.66■□□□□ 0.26
HDLBP-246ENST00000496569 SLC15A2Q16348 729 aa16.66■□□□□ 0.26
HDLBP-246ENST00000496569 MPRIPQ6WCQ1 1025 aa16.65■□□□□ 0.26
HDLBP-246ENST00000496569 MTHFSP49914 203 aa16.64■□□□□ 0.25
HDLBP-246ENST00000496569 SPG7Q9UQ90 795 aa16.64■□□□□ 0.25
HDLBP-246ENST00000496569 ATF5Q9Y2D1 282 aaPredicted RBP16.63■□□□□ 0.25
HDLBP-246ENST00000496569 PHKG2P15735 406 aa16.62■□□□□ 0.25
HDLBP-246ENST00000496569 IL13P35225 146 aa16.62■□□□□ 0.25
HDLBP-246ENST00000496569 COL3A1P02461 1466 aaPredicted RBP16.61■□□□□ 0.25
HDLBP-246ENST00000496569 SULT6B1Q6IMI4 303 aa16.61■□□□□ 0.25
HDLBP-246ENST00000496569 SPON1Q9HCB6 807 aa16.61■□□□□ 0.25
HDLBP-246ENST00000496569 CCNL1Q9UK58 526 aaPredicted RBP16.61■□□□□ 0.25
HDLBP-246ENST00000496569 PALLDQ8WX93 1383 aa16.61■□□□□ 0.25
HDLBP-246ENST00000496569 SCN11AQ9UI33 1791 aa16.61■□□□□ 0.25
HDLBP-246ENST00000496569 PIGBQ92521 554 aa16.6■□□□□ 0.25
HDLBP-246ENST00000496569 AKT1S1Q96B36 256 aa16.6■□□□□ 0.25
HDLBP-246ENST00000496569 KDM6AO15550 1401 aaPredicted RBP16.6■□□□□ 0.25
HDLBP-246ENST00000496569 HMOX1P09601 288 aa16.59■□□□□ 0.25
HDLBP-246ENST00000496569 NKX1-1Q15270 411 aaPredicted RBP16.59■□□□□ 0.25
HDLBP-246ENST00000496569 SLC27A3Q5K4L6 730 aa16.59■□□□□ 0.25
HDLBP-246ENST00000496569 ZNF530Q6P9A1 599 aaPredicted RBP16.59■□□□□ 0.25
HDLBP-246ENST00000496569 IFNL2Q8IZJ0 200 aa16.59■□□□□ 0.25
HDLBP-246ENST00000496569 C4BP0C0L5 1744 aa16.59■□□□□ 0.25
HDLBP-246ENST00000496569 UBR3Q6ZT12 1888 aa16.59■□□□□ 0.25
HDLBP-246ENST00000496569 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.58■□□□□ 0.24
HDLBP-246ENST00000496569 PPP1R1BQ9UD71 204 aaPredicted RBP16.58■□□□□ 0.24
HDLBP-246ENST00000496569 PNPLA7Q6ZV29 1317 aa16.58■□□□□ 0.24
HDLBP-246ENST00000496569 NPC1L1Q9UHC9 1359 aa16.58■□□□□ 0.24
HDLBP-246ENST00000496569 KDRP35968 1356 aa16.57■□□□□ 0.24
HDLBP-246ENST00000496569 PTGER2P43116 358 aa16.57■□□□□ 0.24
HDLBP-246ENST00000496569 COL24A1Q17RW2 1714 aa16.56■□□□□ 0.24
HDLBP-246ENST00000496569 SMIM5Q71RC9 77 aa16.56■□□□□ 0.24
HDLBP-246ENST00000496569 TMOD3Q9NYL9 352 aa16.56■□□□□ 0.24
HDLBP-246ENST00000496569 ASAP1Q9ULH1 1129 aa16.56■□□□□ 0.24
HDLBP-246ENST00000496569 PLEKHO1Q53GL0 409 aaPredicted RBP16.55■□□□□ 0.24
HDLBP-246ENST00000496569 AMIGO3Q86WK7 504 aa16.54■□□□□ 0.24
HDLBP-246ENST00000496569 TFCP2L1Q9NZI6 479 aa16.54■□□□□ 0.24
HDLBP-246ENST00000496569 COL5A3P25940 1745 aaPredicted RBP16.53■□□□□ 0.24
HDLBP-246ENST00000496569 DIAPH1O60610 1272 aaKnown RBP16.53■□□□□ 0.24
HDLBP-246ENST00000496569 MTFR1LQ9H019 292 aa16.53■□□□□ 0.24
HDLBP-246ENST00000496569 MYH14Q7Z406 1995 aaKnown RBP16.52■□□□□ 0.24
HDLBP-246ENST00000496569 SGIP1Q9BQI5 828 aa16.52■□□□□ 0.24
HDLBP-246ENST00000496569 ATG3Q9NT62 314 aa16.52■□□□□ 0.24
HDLBP-246ENST00000496569 PLEKHG2Q9H7P9 1386 aa16.51■□□□□ 0.23
HDLBP-246ENST00000496569 U2SURPO15042 1029 aaKnown RBP16.51■□□□□ 0.23
HDLBP-246ENST00000496569 ITPK1Q13572 414 aa16.51■□□□□ 0.23
HDLBP-246ENST00000496569 LINC00116Q8NCU8 138 aa16.51■□□□□ 0.23
HDLBP-246ENST00000496569 TJP1Q07157 1748 aa16.5■□□□□ 0.23
HDLBP-246ENST00000496569 LOC102724428A0A0B4J2F2 783 aa16.5■□□□□ 0.23
HDLBP-246ENST00000496569 MSH5O43196 834 aa16.5■□□□□ 0.23
HDLBP-246ENST00000496569 SIK1P57059 783 aa16.5■□□□□ 0.23
HDLBP-246ENST00000496569 AMOTQ4VCS5 1084 aa16.5■□□□□ 0.23
HDLBP-246ENST00000496569 C1orf141Q5JVX7 400 aa16.5■□□□□ 0.23
HDLBP-246ENST00000496569 MSL1Q68DK7 614 aa16.5■□□□□ 0.23
HDLBP-246ENST00000496569 COL23A1Q86Y22 540 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 419.6 ms