RNA–Protein interactions for RNA: ENST00000496345.1

GSE1-211, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 2

Gene GSE1, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-211ENST00000496345 BTAF1O14981 1849 aa16.89■□□□□ 0.29
GSE1-211ENST00000496345 HSPA5P11021 654 aaKnown RBP16.89■□□□□ 0.29
GSE1-211ENST00000496345 LRRC4BQ9NT99 713 aa16.89■□□□□ 0.29
GSE1-211ENST00000496345 ATF5Q9Y2D1 282 aaPredicted RBP16.89■□□□□ 0.29
GSE1-211ENST00000496345 INSRP06213 1382 aa16.89■□□□□ 0.29
GSE1-211ENST00000496345 PPM1GO15355 546 aaPredicted RBP16.88■□□□□ 0.29
GSE1-211ENST00000496345 EIF4G2P78344 907 aaKnown RBP eCLIP16.88■□□□□ 0.29
GSE1-211ENST00000496345 RAPGEF4Q8WZA2 1011 aa16.88■□□□□ 0.29
GSE1-211ENST00000496345 FLT4P35916 1363 aa16.88■□□□□ 0.29
GSE1-211ENST00000496345 SMG6Q86US8 1419 aaKnown RBP16.87■□□□□ 0.29
GSE1-211ENST00000496345 CASZ1Q86V15 1759 aa16.87■□□□□ 0.29
GSE1-211ENST00000496345 KCNQ4P56696 695 aa16.87■□□□□ 0.29
GSE1-211ENST00000496345 TATP17735 454 aaPredicted RBP16.86■□□□□ 0.29
GSE1-211ENST00000496345 CGNL1Q0VF96 1302 aa16.86■□□□□ 0.29
GSE1-211ENST00000496345 PTGER2P43116 358 aa16.85■□□□□ 0.29
GSE1-211ENST00000496345 ZNF827Q17R98 1081 aa16.85■□□□□ 0.29
GSE1-211ENST00000496345 TNNT2P45379 298 aaPredicted RBP16.84■□□□□ 0.29
GSE1-211ENST00000496345 KIF24Q5T7B8 1368 aa16.84■□□□□ 0.29
GSE1-211ENST00000496345 SHANK3Q9BYB0 1731 aa16.84■□□□□ 0.29
GSE1-211ENST00000496345 NSD2O96028 1365 aa16.83■□□□□ 0.28
GSE1-211ENST00000496345 DOT1LQ8TEK3 1739 aa16.82■□□□□ 0.28
GSE1-211ENST00000496345 SLC27A3Q5K4L6 730 aa16.82■□□□□ 0.28
GSE1-211ENST00000496345 AKT1S1Q96B36 256 aa16.82■□□□□ 0.28
GSE1-211ENST00000496345 PANK3Q9H999 370 aa16.82■□□□□ 0.28
GSE1-211ENST00000496345 POLKQ9UBT6 870 aa16.82■□□□□ 0.28
GSE1-211ENST00000496345 PAPPAQ13219 1627 aa16.81■□□□□ 0.28
GSE1-211ENST00000496345 WASHC2AQ641Q2 1341 aa16.81■□□□□ 0.28
GSE1-211ENST00000496345 MTFR1LQ9H019 292 aa16.81■□□□□ 0.28
GSE1-211ENST00000496345 CYP27B1O15528 508 aa16.8■□□□□ 0.28
GSE1-211ENST00000496345 EYA1Q99502 592 aa16.8■□□□□ 0.28
GSE1-211ENST00000496345 PCDH11XQ9BZA7 1347 aa16.79■□□□□ 0.28
GSE1-211ENST00000496345 PCDH11YQ9BZA8 1340 aa16.79■□□□□ 0.28
GSE1-211ENST00000496345 MAP2P11137 1827 aaKnown RBP16.78■□□□□ 0.28
GSE1-211ENST00000496345 SGIP1Q9BQI5 828 aa16.78■□□□□ 0.28
GSE1-211ENST00000496345 CCNL1Q9UK58 526 aaPredicted RBP16.78■□□□□ 0.28
GSE1-211ENST00000496345 MPRIPQ6WCQ1 1025 aa16.77■□□□□ 0.28
GSE1-211ENST00000496345 FHDC1Q9C0D6 1143 aaPredicted RBP16.77■□□□□ 0.28
GSE1-211ENST00000496345 TFCP2L1Q9NZI6 479 aa16.77■□□□□ 0.28
GSE1-211ENST00000496345 PNPLA7Q6ZV29 1317 aa16.76■□□□□ 0.27
GSE1-211ENST00000496345 DCAF8L1A6NGE4 600 aa16.75■□□□□ 0.27
GSE1-211ENST00000496345 EIF4A2Q14240 407 aaKnown RBP16.75■□□□□ 0.27
GSE1-211ENST00000496345 SYT17Q9BSW7 474 aa16.75■□□□□ 0.27
GSE1-211ENST00000496345 SPG7Q9UQ90 795 aa16.75■□□□□ 0.27
GSE1-211ENST00000496345 ANKRD26Q9UPS8 1709 aa16.75■□□□□ 0.27
GSE1-211ENST00000496345 LY75O60449 1722 aa16.74■□□□□ 0.27
GSE1-211ENST00000496345 NCAPD2Q15021 1401 aa16.74■□□□□ 0.27
GSE1-211ENST00000496345 ARXQ96QS3 562 aa16.74■□□□□ 0.27
GSE1-211ENST00000496345 MSH5O43196 834 aa16.72■□□□□ 0.27
GSE1-211ENST00000496345 YY1P25490 414 aa16.72■□□□□ 0.27
GSE1-211ENST00000496345 MORC1Q86VD1 984 aa16.72■□□□□ 0.27
GSE1-211ENST00000496345 SLC16A10Q8TF71 515 aa16.72■□□□□ 0.27
GSE1-211ENST00000496345 PIGBQ92521 554 aa16.72■□□□□ 0.27
GSE1-211ENST00000496345 NKX1-1Q15270 411 aaPredicted RBP16.71■□□□□ 0.27
GSE1-211ENST00000496345 PALLDQ8WX93 1383 aa16.71■□□□□ 0.27
GSE1-211ENST00000496345 PKD1L3Q7Z443 1732 aa16.7■□□□□ 0.26
GSE1-211ENST00000496345 COL23A1Q86Y22 540 aaPredicted RBP16.7■□□□□ 0.26
GSE1-211ENST00000496345 KLHL34Q8N239 644 aa16.7■□□□□ 0.26
GSE1-211ENST00000496345 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.7■□□□□ 0.261e-8■□□□□ 9.2
GSE1-211ENST00000496345 KNSTRNQ9Y448 316 aa16.7■□□□□ 0.26
GSE1-211ENST00000496345 TOGARAM1Q9Y4F4 1720 aa16.7■□□□□ 0.26
GSE1-211ENST00000496345 TUBGCP6Q96RT7 1819 aa16.69■□□□□ 0.26
GSE1-211ENST00000496345 PHKG2P15735 406 aa16.69■□□□□ 0.26
GSE1-211ENST00000496345 IFNL2Q8IZJ0 200 aa16.69■□□□□ 0.26
GSE1-211ENST00000496345 POLD1P28340 1107 aa16.68■□□□□ 0.26
GSE1-211ENST00000496345 SMARCC1Q92922 1105 aaPredicted RBP16.68■□□□□ 0.26
GSE1-211ENST00000496345 ITGB4P16144 1822 aa16.68■□□□□ 0.26
GSE1-211ENST00000496345 KIF7Q2M1P5 1343 aa16.68■□□□□ 0.26
GSE1-211ENST00000496345 IGSF1Q8N6C5 1336 aa16.68■□□□□ 0.26
GSE1-211ENST00000496345 QSER1Q2KHR3 1735 aa16.67■□□□□ 0.26
GSE1-211ENST00000496345 TMOD3Q9NYL9 352 aa16.67■□□□□ 0.26
GSE1-211ENST00000496345 MSL1Q68DK7 614 aa16.66■□□□□ 0.26
GSE1-211ENST00000496345 SMIM5Q71RC9 77 aa16.66■□□□□ 0.26
GSE1-211ENST00000496345 ASAP1Q9ULH1 1129 aa16.66■□□□□ 0.26
GSE1-211ENST00000496345 AEBP1Q8IUX7 1158 aa16.65■□□□□ 0.26
GSE1-211ENST00000496345 AMER1Q5JTC6 1135 aaPredicted RBP16.64■□□□□ 0.25
GSE1-211ENST00000496345 AMIGO3Q86WK7 504 aa16.64■□□□□ 0.25
GSE1-211ENST00000496345 C5P01031 1676 aa16.64■□□□□ 0.25
GSE1-211ENST00000496345 LOC102724428A0A0B4J2F2 783 aa16.63■□□□□ 0.25
GSE1-211ENST00000496345 SIK1P57059 783 aa16.63■□□□□ 0.25
GSE1-211ENST00000496345 PLEKHO1Q53GL0 409 aaPredicted RBP16.63■□□□□ 0.25
GSE1-211ENST00000496345 ATG3Q9NT62 314 aa16.63■□□□□ 0.25
GSE1-211ENST00000496345 MAP3K5Q99683 1374 aa16.63■□□□□ 0.25
GSE1-211ENST00000496345 ZNF530Q6P9A1 599 aaPredicted RBP16.62■□□□□ 0.25
GSE1-211ENST00000496345 LINC00116Q8NCU8 138 aa16.62■□□□□ 0.25
GSE1-211ENST00000496345 NLGN2Q8NFZ4 835 aa16.62■□□□□ 0.25
GSE1-211ENST00000496345 AK7Q96M32 723 aa16.62■□□□□ 0.25
GSE1-211ENST00000496345 COL24A1Q17RW2 1714 aa16.62■□□□□ 0.25
GSE1-211ENST00000496345 TAF1LQ8IZX4 1826 aa16.61■□□□□ 0.25
GSE1-211ENST00000496345 PHF14O94880 888 aa16.61■□□□□ 0.25
GSE1-211ENST00000496345 IL13P35225 146 aa16.61■□□□□ 0.25
GSE1-211ENST00000496345 ATP6V1AP38606 617 aa16.61■□□□□ 0.25
GSE1-211ENST00000496345 ITPK1Q13572 414 aa16.61■□□□□ 0.25
GSE1-211ENST00000496345 GPR162Q16538 588 aa16.61■□□□□ 0.25
GSE1-211ENST00000496345 SULT6B1Q6IMI4 303 aa16.61■□□□□ 0.25
GSE1-211ENST00000496345 FLAD1Q8NFF5 587 aa16.61■□□□□ 0.25
GSE1-211ENST00000496345 UTRNP46939 3433 aa16.6■□□□□ 0.25
GSE1-211ENST00000496345 C4BP0C0L5 1744 aa16.6■□□□□ 0.25
GSE1-211ENST00000496345 PER1O15534 1290 aaPredicted RBP16.6■□□□□ 0.25
GSE1-211ENST00000496345 HMGB2P26583 209 aaKnown RBP16.6■□□□□ 0.25
GSE1-211ENST00000496345 CNGB1Q14028 1251 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms