RNA–Protein interactions for RNA: ENST00000496310.1

UBP1-213, Transcript of upstream binding protein 1, humanhuman

TSL 4

Gene UBP1, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-213ENST00000496310 TTC21AQ8NDW8 1320 aa10.25□□□□□ -0.77
UBP1-213ENST00000496310 C5P01031 1676 aa10.25□□□□□ -0.77
UBP1-213ENST00000496310 SLC27A3Q5K4L6 730 aa10.24□□□□□ -0.77
UBP1-213ENST00000496310 GPBP1L1Q9HC44 474 aaPredicted RBP10.24□□□□□ -0.77
UBP1-213ENST00000496310 USP54Q70EL1 1684 aa10.24□□□□□ -0.77
UBP1-213ENST00000496310 ITGB4P16144 1822 aa10.23□□□□□ -0.77
UBP1-213ENST00000496310 GRIN3BO60391 1043 aa10.23□□□□□ -0.77
UBP1-213ENST00000496310 TMC1Q8TDI8 760 aa10.23□□□□□ -0.77
UBP1-213ENST00000496310 L3MBTL2Q969R5 705 aa10.23□□□□□ -0.77
UBP1-213ENST00000496310 CCNL1Q9UK58 526 aaPredicted RBP10.23□□□□□ -0.77
UBP1-213ENST00000496310 NSD2O96028 1365 aa10.23□□□□□ -0.77
UBP1-213ENST00000496310 HSPA6P17066 643 aa10.22□□□□□ -0.77
UBP1-213ENST00000496310 FAM208AQ9UK61 1670 aaKnown RBP10.22□□□□□ -0.77
UBP1-213ENST00000496310 N4BP2Q86UW6 1770 aaPredicted RBP10.21□□□□□ -0.77
UBP1-213ENST00000496310 SIN3AQ96ST3 1273 aa10.21□□□□□ -0.77
UBP1-213ENST00000496310 SLC12A5Q9H2X9 1139 aa10.21□□□□□ -0.77
UBP1-213ENST00000496310 SBNO2Q9Y2G9 1366 aa10.21□□□□□ -0.78
UBP1-213ENST00000496310 CD163L1Q9NR16 1453 aa10.21□□□□□ -0.78
UBP1-213ENST00000496310 UBR3Q6ZT12 1888 aa10.2□□□□□ -0.78
UBP1-213ENST00000496310 USP31Q70CQ4 1352 aa10.2□□□□□ -0.78
UBP1-213ENST00000496310 AMIGO3Q86WK7 504 aa10.2□□□□□ -0.78
UBP1-213ENST00000496310 ANKRD36BQ8N2N9 1353 aa10.2□□□□□ -0.78
UBP1-213ENST00000496310 USHBP1Q8N6Y0 703 aa10.2□□□□□ -0.78
UBP1-213ENST00000496310 TOGARAM1Q9Y4F4 1720 aa10.19□□□□□ -0.78
UBP1-213ENST00000496310 ROCK2O75116 1388 aaKnown RBP10.19□□□□□ -0.78
UBP1-213ENST00000496310 NEUROD1Q13562 356 aa10.19□□□□□ -0.78
UBP1-213ENST00000496310 MEGF6O75095 1541 aa10.18□□□□□ -0.78
UBP1-213ENST00000496310 ADCY9O60503 1353 aa10.18□□□□□ -0.78
UBP1-213ENST00000496310 ZCRB1Q8TBF4 217 aaKnown RBP10.18□□□□□ -0.78
UBP1-213ENST00000496310 IP6K1Q92551 441 aa10.18□□□□□ -0.78
UBP1-213ENST00000496310 IGSF1Q8N6C5 1336 aa10.17□□□□□ -0.78
UBP1-213ENST00000496310 C4BP0C0L5 1744 aa10.17□□□□□ -0.78
UBP1-213ENST00000496310 KIF3CO14782 793 aa10.17□□□□□ -0.78
UBP1-213ENST00000496310 CAPN15O75808 1086 aa10.17□□□□□ -0.78
UBP1-213ENST00000496310 PHF14O94880 888 aa10.17□□□□□ -0.78
UBP1-213ENST00000496310 USP47Q96K76 1375 aa10.16□□□□□ -0.78
UBP1-213ENST00000496310 HTRA3P83110 453 aa10.16□□□□□ -0.78
UBP1-213ENST00000496310 CD2APQ9Y5K6 639 aa10.16□□□□□ -0.78
UBP1-213ENST00000496310 MAP3K19Q56UN5 1328 aa10.15□□□□□ -0.78
UBP1-213ENST00000496310 HOXC9P31274 260 aa10.15□□□□□ -0.78
UBP1-213ENST00000496310 AMPHP49418 695 aa10.15□□□□□ -0.78
UBP1-213ENST00000496310 MPRIPQ6WCQ1 1025 aa10.15□□□□□ -0.78
UBP1-213ENST00000496310 PPP4R3CPQ6ZMV5 832 aa10.15□□□□□ -0.78
UBP1-213ENST00000496310 HDGFL2Q7Z4V5 671 aaPredicted RBP10.15□□□□□ -0.78
UBP1-213ENST00000496310 A0A1W2PP64 1363 aa10.14□□□□□ -0.79
UBP1-213ENST00000496310 WDR90Q96KV7 1748 aa10.14□□□□□ -0.79
UBP1-213ENST00000496310 RRS1Q15050 365 aaKnown RBP10.14□□□□□ -0.79
UBP1-213ENST00000496310 NBPF6Q5VWK0 638 aa10.14□□□□□ -0.79
UBP1-213ENST00000496310 NBPF4Q96M43 638 aa10.14□□□□□ -0.79
UBP1-213ENST00000496310 MAP2P11137 1827 aaKnown RBP10.14□□□□□ -0.79
UBP1-213ENST00000496310 KIAA1551Q9HCM1 1747 aa10.13□□□□□ -0.79
UBP1-213ENST00000496310 EDC4Q6P2E9 1401 aaKnown RBP10.13□□□□□ -0.79
UBP1-213ENST00000496310 DNAJC5GQ8N7S2 189 aa10.12□□□□□ -0.79
UBP1-213ENST00000496310 NMRK2Q9NPI5 230 aa10.12□□□□□ -0.79
UBP1-213ENST00000496310 CCDC88AQ3V6T2 1871 aa10.12□□□□□ -0.79
UBP1-213ENST00000496310 PALLDQ8WX93 1383 aa10.12□□□□□ -0.79
UBP1-213ENST00000496310 KIF13BQ9NQT8 1826 aa10.12□□□□□ -0.79
UBP1-213ENST00000496310 SBF1O95248 1867 aa10.11□□□□□ -0.79
UBP1-213ENST00000496310 BRCA1P38398 1863 aaKnown RBP10.11□□□□□ -0.79
UBP1-213ENST00000496310 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.11□□□□□ -0.79
UBP1-213ENST00000496310 COL13A1Q5TAT6 717 aaPredicted RBP10.11□□□□□ -0.79
UBP1-213ENST00000496310 AK7Q96M32 723 aa10.11□□□□□ -0.79
UBP1-213ENST00000496310 APLP1P51693 650 aa10.1□□□□□ -0.79
UBP1-213ENST00000496310 LINC00116Q8NCU8 138 aa10.1□□□□□ -0.79
UBP1-213ENST00000496310 COG3Q96JB2 828 aa10.1□□□□□ -0.79
UBP1-213ENST00000496310 CARD11Q9BXL7 1154 aa10.1□□□□□ -0.79
UBP1-213ENST00000496310 TERF2IPQ9NYB0 399 aa10.1□□□□□ -0.79
UBP1-213ENST00000496310 A0A0G2JLW4 131 aa10.09□□□□□ -0.79
UBP1-213ENST00000496310 CYP27B1O15528 508 aa10.09□□□□□ -0.79
UBP1-213ENST00000496310 TATP17735 454 aaPredicted RBP10.09□□□□□ -0.79
UBP1-213ENST00000496310 ARHGAP27Q6ZUM4 889 aa10.09□□□□□ -0.79
UBP1-213ENST00000496310 RAPGEF4Q8WZA2 1011 aa10.09□□□□□ -0.79
UBP1-213ENST00000496310 GGNBP2Q9H3C7 697 aa10.09□□□□□ -0.79
UBP1-213ENST00000496310 BCS1LQ9Y276 419 aa10.09□□□□□ -0.79
UBP1-213ENST00000496310 KIF20BQ96Q89 1820 aa10.09□□□□□ -0.79
UBP1-213ENST00000496310 HSP90AB2PQ58FF8 381 aa10.08□□□□□ -0.8
UBP1-213ENST00000496310 FLAD1Q8NFF5 587 aa10.08□□□□□ -0.8
UBP1-213ENST00000496310 PIGBQ92521 554 aa10.08□□□□□ -0.8
UBP1-213ENST00000496310 MYH14Q7Z406 1995 aaKnown RBP10.08□□□□□ -0.8
UBP1-213ENST00000496310 CICQ96RK0 1608 aaPredicted RBP10.07□□□□□ -0.8
UBP1-213ENST00000496310 PKD1L3Q7Z443 1732 aa10.07□□□□□ -0.8
UBP1-213ENST00000496310 ARFGEF1Q9Y6D6 1849 aa10.07□□□□□ -0.8
UBP1-213ENST00000496310 GNPATO15228 680 aa10.07□□□□□ -0.8
UBP1-213ENST00000496310 TOMM70O94826 608 aa10.07□□□□□ -0.8
UBP1-213ENST00000496310 MMP10P09238 476 aa10.07□□□□□ -0.8
UBP1-213ENST00000496310 ITPK1Q13572 414 aa10.07□□□□□ -0.8
UBP1-213ENST00000496310 PXDNLA1KZ92 1463 aa10.06□□□□□ -0.8
UBP1-213ENST00000496310 KCNA4P22459 653 aa10.06□□□□□ -0.8
UBP1-213ENST00000496310 ASAP1Q9ULH1 1129 aa10.06□□□□□ -0.8
UBP1-213ENST00000496310 PCDH11XQ9BZA7 1347 aa10.06□□□□□ -0.8
UBP1-213ENST00000496310 PCDH11YQ9BZA8 1340 aa10.06□□□□□ -0.8
UBP1-213ENST00000496310 LOC102724428A0A0B4J2F2 783 aa10.05□□□□□ -0.8
UBP1-213ENST00000496310 DPEP1P16444 411 aa10.05□□□□□ -0.8
UBP1-213ENST00000496310 SIK1P57059 783 aa10.05□□□□□ -0.8
UBP1-213ENST00000496310 C4AP0C0L4 1744 aa10.04□□□□□ -0.8
UBP1-213ENST00000496310 KCPQ6ZWJ8 1503 aa10.04□□□□□ -0.8
UBP1-213ENST00000496310 FYB1O15117 783 aa10.04□□□□□ -0.8
UBP1-213ENST00000496310 FCHSD2O94868 740 aa10.04□□□□□ -0.8
UBP1-213ENST00000496310 ATP6V1AP38606 617 aa10.04□□□□□ -0.8
UBP1-213ENST00000496310 SMARCC1Q92922 1105 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms