RNA–Protein interactions for RNA: ENST00000496239.5

NECAP2-207, Transcript of NECAP endocytosis associated 2, humanhuman

TSL 2

Gene NECAP2, Length 4,619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP2-207ENST00000496239 BAG6P46379 1132 aa13.44□□□□□ -0.26
NECAP2-207ENST00000496239 RUFY2Q8WXA3 655 aa13.44□□□□□ -0.26
NECAP2-207ENST00000496239 DCAF5Q96JK2 942 aa13.44□□□□□ -0.26
NECAP2-207ENST00000496239 CEP126Q9P2H0 1117 aa13.44□□□□□ -0.26
NECAP2-207ENST00000496239 CDC42BPAQ5VT25 1732 aa13.44□□□□□ -0.26
NECAP2-207ENST00000496239 LNPKQ9C0E8 428 aa13.44□□□□□ -0.26
NECAP2-207ENST00000496239 PIK3C2GO75747 1445 aa13.44□□□□□ -0.26
NECAP2-207ENST00000496239 EDC4Q6P2E9 1401 aaKnown RBP13.44□□□□□ -0.26
NECAP2-207ENST00000496239 A0A087WZG4 1122 aa13.44□□□□□ -0.26
NECAP2-207ENST00000496239 HYPKQ9NX55 129 aa13.44□□□□□ -0.26
NECAP2-207ENST00000496239 ATF7IPQ6VMQ6 1270 aa13.43□□□□□ -0.26
NECAP2-207ENST00000496239 PCDH11XQ9BZA7 1347 aa13.43□□□□□ -0.26
NECAP2-207ENST00000496239 PCDH11YQ9BZA8 1340 aa13.43□□□□□ -0.26
NECAP2-207ENST00000496239 RXRBP28702 533 aa13.43□□□□□ -0.26
NECAP2-207ENST00000496239 BRINP3Q76B58 766 aa13.43□□□□□ -0.26
NECAP2-207ENST00000496239 RPGRQ92834 1020 aaKnown RBP13.43□□□□□ -0.26
NECAP2-207ENST00000496239 C1orf115Q9H7X2 142 aa13.43□□□□□ -0.26
NECAP2-207ENST00000496239 CENPQQ7L2Z9 268 aaPredicted RBP13.43□□□□□ -0.26
NECAP2-207ENST00000496239 TBC1D2BQ9UPU7 963 aa13.43□□□□□ -0.26
NECAP2-207ENST00000496239 CTDP1Q9Y5B0 961 aaPredicted RBP13.43□□□□□ -0.26
NECAP2-207ENST00000496239 MTHFSDQ2M296 383 aaKnown RBP13.43□□□□□ -0.26
NECAP2-207ENST00000496239 RTCBQ9Y3I0 505 aaKnown RBP13.43□□□□□ -0.26
NECAP2-207ENST00000496239 POLD1P28340 1107 aa13.42□□□□□ -0.26
NECAP2-207ENST00000496239 STK32BQ9NY57 414 aa13.42□□□□□ -0.26
NECAP2-207ENST00000496239 APBA3O96018 575 aa13.42□□□□□ -0.26
NECAP2-207ENST00000496239 ANXA1P04083 346 aa13.42□□□□□ -0.26
NECAP2-207ENST00000496239 ZNF622Q969S3 477 aaKnown RBP eCLIP13.42□□□□□ -0.26
NECAP2-207ENST00000496239 SRGAP3O43295 1099 aa13.41□□□□□ -0.26
NECAP2-207ENST00000496239 PRIM1P49642 420 aaKnown RBP13.41□□□□□ -0.26
NECAP2-207ENST00000496239 NBPF6Q5VWK0 638 aa13.41□□□□□ -0.26
NECAP2-207ENST00000496239 NBPF5PQ86XG9 351 aaPredicted RBP13.41□□□□□ -0.26
NECAP2-207ENST00000496239 NBPF4Q96M43 638 aa13.41□□□□□ -0.26
NECAP2-207ENST00000496239 DIP2BQ9P265 1576 aa13.41□□□□□ -0.26
NECAP2-207ENST00000496239 CCDC158Q5M9N0 1113 aa13.41□□□□□ -0.26
NECAP2-207ENST00000496239 SAMD1Q6SPF0 538 aaPredicted RBP13.41□□□□□ -0.26
NECAP2-207ENST00000496239 CCNL1Q9UK58 526 aaPredicted RBP13.41□□□□□ -0.26
NECAP2-207ENST00000496239 GOLGA6L4A6NEF3 574 aa13.4□□□□□ -0.26
NECAP2-207ENST00000496239 PTPRMP28827 1452 aa13.4□□□□□ -0.26
NECAP2-207ENST00000496239 RBM5P52756 815 aaKnown RBP eCLIP13.4□□□□□ -0.26
NECAP2-207ENST00000496239 PTPRTO14522 1441 aa13.4□□□□□ -0.26
NECAP2-207ENST00000496239 ERC1Q8IUD2 1116 aa13.4□□□□□ -0.26
NECAP2-207ENST00000496239 ASXL1Q8IXJ9 1541 aa13.4□□□□□ -0.27
NECAP2-207ENST00000496239 SBNO1A3KN83 1393 aa13.39□□□□□ -0.27
NECAP2-207ENST00000496239 ATP5J2-PTCD1G3V325 749 aa13.39□□□□□ -0.27
NECAP2-207ENST00000496239 SLFN5Q08AF3 891 aa13.39□□□□□ -0.27
NECAP2-207ENST00000496239 TRDNQ13061 729 aa13.39□□□□□ -0.27
NECAP2-207ENST00000496239 NOL8Q76FK4 1167 aaKnown RBP13.39□□□□□ -0.27
NECAP2-207ENST00000496239 SETDB2Q96T68 719 aa13.39□□□□□ -0.27
NECAP2-207ENST00000496239 PPP1R42Q7Z4L9 355 aa13.39□□□□□ -0.27
NECAP2-207ENST00000496239 DNAAF4Q8WXU2 420 aa13.39□□□□□ -0.27
NECAP2-207ENST00000496239 DNAJC2Q99543 621 aaKnown RBP13.39□□□□□ -0.27
NECAP2-207ENST00000496239 WWC3Q9ULE0 1092 aa13.39□□□□□ -0.27
NECAP2-207ENST00000496239 ANKIB1Q9P2G1 1089 aa13.38□□□□□ -0.27
NECAP2-207ENST00000496239 KIAA0232Q92628 1395 aa13.38□□□□□ -0.27
NECAP2-207ENST00000496239 F6X3S4 739 aa13.38□□□□□ -0.27
NECAP2-207ENST00000496239 SPATA31E1Q6ZUB1 1445 aa13.38□□□□□ -0.27
NECAP2-207ENST00000496239 AAMPQ13685 434 aa13.38□□□□□ -0.27
NECAP2-207ENST00000496239 PDE3AQ14432 1141 aa13.38□□□□□ -0.27
NECAP2-207ENST00000496239 NCBP3Q53F19 620 aaKnown RBP13.38□□□□□ -0.27
NECAP2-207ENST00000496239 SYNE3Q6ZMZ3 975 aa13.38□□□□□ -0.27
NECAP2-207ENST00000496239 CWC22Q9HCG8 908 aaKnown RBP13.38□□□□□ -0.27
NECAP2-207ENST00000496239 C6orf229H3BNL8 230 aa13.38□□□□□ -0.27
NECAP2-207ENST00000496239 GNPATO15228 680 aa13.38□□□□□ -0.27
NECAP2-207ENST00000496239 CDK11BP21127 795 aaKnown RBP13.38□□□□□ -0.27
NECAP2-207ENST00000496239 TTC39AQ5SRH9 613 aa13.38□□□□□ -0.27
NECAP2-207ENST00000496239 DHX16O60231 1041 aaKnown RBP13.37□□□□□ -0.27
NECAP2-207ENST00000496239 METTL24Q5JXM2 366 aa13.37□□□□□ -0.27
NECAP2-207ENST00000496239 SPRYD3Q8NCJ5 442 aa13.37□□□□□ -0.27
NECAP2-207ENST00000496239 SSH1Q8WYL5 1049 aa13.37□□□□□ -0.27
NECAP2-207ENST00000496239 KDM4FA0A1W2PPD8 638 aa13.37□□□□□ -0.27
NECAP2-207ENST00000496239 HTATSF1O43719 755 aaKnown RBP13.37□□□□□ -0.27
NECAP2-207ENST00000496239 FLIIQ13045 1269 aa13.37□□□□□ -0.27
NECAP2-207ENST00000496239 IFIT5Q13325 482 aaKnown RBP13.37□□□□□ -0.27
NECAP2-207ENST00000496239 ANKRD13DQ6ZTN6 518 aa13.37□□□□□ -0.27
NECAP2-207ENST00000496239 FSD1Q9BTV5 496 aa13.37□□□□□ -0.27
NECAP2-207ENST00000496239 FANCIQ9NVI1 1328 aa13.37□□□□□ -0.27
NECAP2-207ENST00000496239 PIP4K2AP48426 406 aaPredicted RBP13.37□□□□□ -0.27
NECAP2-207ENST00000496239 FAM161AQ3B820 660 aa13.37□□□□□ -0.27
NECAP2-207ENST00000496239 DDX46Q7L014 1031 aaKnown RBP13.37□□□□□ -0.27
NECAP2-207ENST00000496239 ZKSCAN1P17029 563 aaPredicted RBP13.36□□□□□ -0.27
NECAP2-207ENST00000496239 ST5P78524 1137 aa13.36□□□□□ -0.27
NECAP2-207ENST00000496239 MBIPQ9NS73 344 aa13.36□□□□□ -0.27
NECAP2-207ENST00000496239 PI4KAP2A4QPH2 592 aa13.36□□□□□ -0.27
NECAP2-207ENST00000496239 COPS6Q7L5N1 327 aa13.36□□□□□ -0.27
NECAP2-207ENST00000496239 PI4KAP1Q8N8J0 262 aa13.36□□□□□ -0.27
NECAP2-207ENST00000496239 VPS53Q5VIR6 699 aa13.36□□□□□ -0.27
NECAP2-207ENST00000496239 GLI2P10070 1586 aa13.35□□□□□ -0.27
NECAP2-207ENST00000496239 RNMTO43148 476 aaKnown RBP13.35□□□□□ -0.27
NECAP2-207ENST00000496239 CHAF1AQ13111 956 aaPredicted RBP13.35□□□□□ -0.27
NECAP2-207ENST00000496239 AKAP17AQ02040 695 aaKnown RBP13.35□□□□□ -0.27
NECAP2-207ENST00000496239 XAGE3Q8WTP9 111 aa13.35□□□□□ -0.27
NECAP2-207ENST00000496239 PHACTR3Q96KR7 559 aa13.35□□□□□ -0.27
NECAP2-207ENST00000496239 ANO2Q9NQ90 1003 aa13.35□□□□□ -0.27
NECAP2-207ENST00000496239 NIP7Q9Y221 180 aaKnown RBP eCLIP13.35□□□□□ -0.27
NECAP2-207ENST00000496239 KDM5CP41229 1560 aa13.35□□□□□ -0.27
NECAP2-207ENST00000496239 TRAPPC3LQ5T215 181 aa13.35□□□□□ -0.27
NECAP2-207ENST00000496239 MAP3K4Q9Y6R4 1608 aa13.35□□□□□ -0.27
NECAP2-207ENST00000496239 ZFYVE9O95405 1425 aa13.35□□□□□ -0.27
NECAP2-207ENST00000496239 PRR36Q9H6K5 1346 aa13.34□□□□□ -0.27
NECAP2-207ENST00000496239 PLXNC1O60486 1568 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms