RNA–Protein interactions for RNA: ENST00000496222.1

TRIM59-207, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-207ENST00000496222 PPM1GO15355 546 aaPredicted RBP16.92■□□□□ 0.3
TRIM59-207ENST00000496222 PROM2Q8N271 834 aa16.92■□□□□ 0.3
TRIM59-207ENST00000496222 KNSTRNQ9Y448 316 aa16.92■□□□□ 0.3
TRIM59-207ENST00000496222 ZCRB1Q8TBF4 217 aaKnown RBP16.9■□□□□ 0.3
TRIM59-207ENST00000496222 DDX54Q8TDD1 881 aaKnown RBP16.9■□□□□ 0.3
TRIM59-207ENST00000496222 EYA1Q99502 592 aa16.9■□□□□ 0.3
TRIM59-207ENST00000496222 EIF4A2Q14240 407 aaKnown RBP16.89■□□□□ 0.29
TRIM59-207ENST00000496222 ACSBG1Q96GR2 724 aa16.89■□□□□ 0.29
TRIM59-207ENST00000496222 PSDA5PKW4 1024 aaPredicted RBP16.88■□□□□ 0.29
TRIM59-207ENST00000496222 MORC1Q86VD1 984 aa16.88■□□□□ 0.29
TRIM59-207ENST00000496222 BTAF1O14981 1849 aa16.87■□□□□ 0.29
TRIM59-207ENST00000496222 RAPGEF4Q8WZA2 1011 aa16.87■□□□□ 0.29
TRIM59-207ENST00000496222 PKD1L3Q7Z443 1732 aa16.87■□□□□ 0.29
TRIM59-207ENST00000496222 TATP17735 454 aaPredicted RBP16.86■□□□□ 0.29
TRIM59-207ENST00000496222 R3HDM1Q15032 1099 aaKnown RBP16.86■□□□□ 0.29
TRIM59-207ENST00000496222 NPC1L1Q9UHC9 1359 aa16.85■□□□□ 0.29
TRIM59-207ENST00000496222 KAT6BQ8WYB5 2073 aa16.85■□□□□ 0.29
TRIM59-207ENST00000496222 DOT1LQ8TEK3 1739 aa16.84■□□□□ 0.29
TRIM59-207ENST00000496222 CYP27B1O15528 508 aa16.84■□□□□ 0.29
TRIM59-207ENST00000496222 IGSF1Q8N6C5 1336 aa16.84■□□□□ 0.29
TRIM59-207ENST00000496222 TXNRD1Q16881 649 aa16.83■□□□□ 0.28
TRIM59-207ENST00000496222 ANO8Q9HCE9 1232 aaPredicted RBP16.83■□□□□ 0.28
TRIM59-207ENST00000496222 PRIM1P49642 420 aaKnown RBP16.82■□□□□ 0.28
TRIM59-207ENST00000496222 PCDH11XQ9BZA7 1347 aa16.81■□□□□ 0.28
TRIM59-207ENST00000496222 PCDH11YQ9BZA8 1340 aa16.81■□□□□ 0.28
TRIM59-207ENST00000496222 CC2D1BQ5T0F9 858 aaKnown RBP16.81■□□□□ 0.28
TRIM59-207ENST00000496222 LRP5O75197 1615 aa16.81■□□□□ 0.28
TRIM59-207ENST00000496222 TOGARAM1Q9Y4F4 1720 aa16.8■□□□□ 0.28
TRIM59-207ENST00000496222 IL13P35225 146 aa16.8■□□□□ 0.28
TRIM59-207ENST00000496222 NKX1-1Q15270 411 aaPredicted RBP16.8■□□□□ 0.28
TRIM59-207ENST00000496222 NBPF14Q5TI25 921 aa16.8■□□□□ 0.28
TRIM59-207ENST00000496222 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.8■□□□□ 0.28
TRIM59-207ENST00000496222 PLEKHG2Q9H7P9 1386 aa16.79■□□□□ 0.28
TRIM59-207ENST00000496222 PAPPAQ13219 1627 aa16.79■□□□□ 0.28
TRIM59-207ENST00000496222 MTHFSP49914 203 aa16.79■□□□□ 0.28
TRIM59-207ENST00000496222 LRRC4BQ9NT99 713 aa16.79■□□□□ 0.28
TRIM59-207ENST00000496222 LY75O60449 1722 aa16.77■□□□□ 0.28
TRIM59-207ENST00000496222 AEBP1Q8IUX7 1158 aa16.77■□□□□ 0.28
TRIM59-207ENST00000496222 SPG7Q9UQ90 795 aa16.77■□□□□ 0.28
TRIM59-207ENST00000496222 KDRP35968 1356 aa16.77■□□□□ 0.27
TRIM59-207ENST00000496222 ITGB4P16144 1822 aa16.76■□□□□ 0.27
TRIM59-207ENST00000496222 SYTL4Q96C24 671 aaPredicted RBP16.76■□□□□ 0.27
TRIM59-207ENST00000496222 CASZ1Q86V15 1759 aa16.76■□□□□ 0.27
TRIM59-207ENST00000496222 PHKG2P15735 406 aa16.75■□□□□ 0.27
TRIM59-207ENST00000496222 PDGFDQ9GZP0 370 aaPredicted RBP16.75■□□□□ 0.27
TRIM59-207ENST00000496222 COL3A1P02461 1466 aaPredicted RBP16.74■□□□□ 0.27
TRIM59-207ENST00000496222 SLC15A2Q16348 729 aa16.73■□□□□ 0.27
TRIM59-207ENST00000496222 KCNQ4P56696 695 aa16.72■□□□□ 0.27
TRIM59-207ENST00000496222 ZNF827Q17R98 1081 aa16.72■□□□□ 0.27
TRIM59-207ENST00000496222 SLC27A3Q5K4L6 730 aa16.72■□□□□ 0.27
TRIM59-207ENST00000496222 SULT6B1Q6IMI4 303 aa16.72■□□□□ 0.27
TRIM59-207ENST00000496222 IFNL2Q8IZJ0 200 aa16.72■□□□□ 0.27
TRIM59-207ENST00000496222 PIGBQ92521 554 aa16.71■□□□□ 0.27
TRIM59-207ENST00000496222 AKT1S1Q96B36 256 aa16.71■□□□□ 0.27
TRIM59-207ENST00000496222 CNGB1Q14028 1251 aaPredicted RBP16.7■□□□□ 0.26
TRIM59-207ENST00000496222 MPRIPQ6WCQ1 1025 aa16.7■□□□□ 0.26
TRIM59-207ENST00000496222 STK32BQ9NY57 414 aa16.7■□□□□ 0.26
TRIM59-207ENST00000496222 DIAPH1O60610 1272 aaKnown RBP16.69■□□□□ 0.26
TRIM59-207ENST00000496222 AMOTQ4VCS5 1084 aa16.69■□□□□ 0.26
TRIM59-207ENST00000496222 PLEKHO1Q53GL0 409 aaPredicted RBP16.69■□□□□ 0.26
TRIM59-207ENST00000496222 KDM6AO15550 1401 aaPredicted RBP16.68■□□□□ 0.26
TRIM59-207ENST00000496222 ZNF530Q6P9A1 599 aaPredicted RBP16.67■□□□□ 0.26
TRIM59-207ENST00000496222 TUBGCP6Q96RT7 1819 aa16.67■□□□□ 0.26
TRIM59-207ENST00000496222 QSER1Q2KHR3 1735 aa16.67■□□□□ 0.26
TRIM59-207ENST00000496222 PALLDQ8WX93 1383 aa16.66■□□□□ 0.26
TRIM59-207ENST00000496222 TAF1LQ8IZX4 1826 aa16.66■□□□□ 0.26
TRIM59-207ENST00000496222 HMOX1P09601 288 aa16.66■□□□□ 0.26
TRIM59-207ENST00000496222 PPP2R1AP30153 589 aa16.66■□□□□ 0.26
TRIM59-207ENST00000496222 CCNL1Q9UK58 526 aaPredicted RBP16.66■□□□□ 0.26
TRIM59-207ENST00000496222 ERVV-2B6SEH9 535 aa16.65■□□□□ 0.26
TRIM59-207ENST00000496222 DCAF5Q96JK2 942 aa16.65■□□□□ 0.26
TRIM59-207ENST00000496222 SPON1Q9HCB6 807 aa16.65■□□□□ 0.26
TRIM59-207ENST00000496222 ASAP1Q9ULH1 1129 aa16.65■□□□□ 0.26
TRIM59-207ENST00000496222 PTGER2P43116 358 aa16.64■□□□□ 0.25
TRIM59-207ENST00000496222 TMOD3Q9NYL9 352 aa16.64■□□□□ 0.25
TRIM59-207ENST00000496222 C5P01031 1676 aa16.64■□□□□ 0.25
TRIM59-207ENST00000496222 ZBTB7AO95365 584 aa16.63■□□□□ 0.25
TRIM59-207ENST00000496222 HSP90AB1P08238 724 aaKnown RBP16.63■□□□□ 0.25
TRIM59-207ENST00000496222 SMARCC1Q92922 1105 aaPredicted RBP16.63■□□□□ 0.25
TRIM59-207ENST00000496222 SGIP1Q9BQI5 828 aa16.63■□□□□ 0.25
TRIM59-207ENST00000496222 ATG3Q9NT62 314 aa16.63■□□□□ 0.25
TRIM59-207ENST00000496222 PNPLA7Q6ZV29 1317 aa16.63■□□□□ 0.25
TRIM59-207ENST00000496222 SCN11AQ9UI33 1791 aa16.62■□□□□ 0.25
TRIM59-207ENST00000496222 MTHFSDQ2M296 383 aaKnown RBP16.61■□□□□ 0.25
TRIM59-207ENST00000496222 ADAMTS7Q9UKP4 1686 aa16.61■□□□□ 0.25
TRIM59-207ENST00000496222 COL24A1Q17RW2 1714 aa16.61■□□□□ 0.25
TRIM59-207ENST00000496222 LOC102724428A0A0B4J2F2 783 aa16.6■□□□□ 0.25
TRIM59-207ENST00000496222 SIK1P57059 783 aa16.6■□□□□ 0.25
TRIM59-207ENST00000496222 AKAP4Q5JQC9 854 aa16.6■□□□□ 0.25
TRIM59-207ENST00000496222 C1orf141Q5JVX7 400 aa16.6■□□□□ 0.25
TRIM59-207ENST00000496222 SLC4A9Q96Q91 983 aa16.6■□□□□ 0.25
TRIM59-207ENST00000496222 MTFR1LQ9H019 292 aa16.6■□□□□ 0.25
TRIM59-207ENST00000496222 LGR6Q9HBX8 967 aa16.6■□□□□ 0.25
TRIM59-207ENST00000496222 ATF5Q9Y2D1 282 aaPredicted RBP16.6■□□□□ 0.25
TRIM59-207ENST00000496222 C4BP0C0L5 1744 aa16.59■□□□□ 0.25
TRIM59-207ENST00000496222 ITPK1Q13572 414 aa16.59■□□□□ 0.25
TRIM59-207ENST00000496222 AMIGO3Q86WK7 504 aa16.59■□□□□ 0.25
TRIM59-207ENST00000496222 TFCP2L1Q9NZI6 479 aa16.59■□□□□ 0.25
TRIM59-207ENST00000496222 ZNF831Q5JPB2 1677 aa16.59■□□□□ 0.25
TRIM59-207ENST00000496222 VIRMAQ69YN4 1812 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms