RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 ACSBG1Q96GR2 724 aa28.25■■■□□ 2.11
COL9A2-211ENST00000496215 POLKQ9UBT6 870 aa28.25■■■□□ 2.11
COL9A2-211ENST00000496215 LRP5O75197 1615 aa28.25■■■□□ 2.11
COL9A2-211ENST00000496215 WASHC2AQ641Q2 1341 aa28.24■■■□□ 2.11
COL9A2-211ENST00000496215 NCAPD2Q15021 1401 aa28.24■■■□□ 2.11
COL9A2-211ENST00000496215 DOT1LQ8TEK3 1739 aa28.23■■■□□ 2.11
COL9A2-211ENST00000496215 MORC1Q86VD1 984 aa28.23■■■□□ 2.11
COL9A2-211ENST00000496215 PROM2Q8N271 834 aa28.23■■■□□ 2.11
COL9A2-211ENST00000496215 DDX54Q8TDD1 881 aaKnown RBP28.22■■■□□ 2.11
COL9A2-211ENST00000496215 PKD1L3Q7Z443 1732 aa28.21■■■□□ 2.11
COL9A2-211ENST00000496215 RAPGEF4Q8WZA2 1011 aa28.21■■■□□ 2.11
COL9A2-211ENST00000496215 AMER1Q5JTC6 1135 aaPredicted RBP28.19■■■□□ 2.1
COL9A2-211ENST00000496215 ZCRB1Q8TBF4 217 aaKnown RBP28.18■■■□□ 2.1
COL9A2-211ENST00000496215 ANO8Q9HCE9 1232 aaPredicted RBP28.18■■■□□ 2.1
COL9A2-211ENST00000496215 TATP17735 454 aaPredicted RBP28.17■■■□□ 2.1
COL9A2-211ENST00000496215 KAT6BQ8WYB5 2073 aa28.16■■■□□ 2.1
COL9A2-211ENST00000496215 PAPPAQ13219 1627 aa28.14■■■□□ 2.09
COL9A2-211ENST00000496215 TXNRD1Q16881 649 aa28.13■■■□□ 2.09
COL9A2-211ENST00000496215 EYA1Q99502 592 aa28.13■■■□□ 2.09
COL9A2-211ENST00000496215 PER1O15534 1290 aaPredicted RBP28.12■■■□□ 2.09
COL9A2-211ENST00000496215 EIF4A2Q14240 407 aaKnown RBP28.12■■■□□ 2.09
COL9A2-211ENST00000496215 PCDH11XQ9BZA7 1347 aa28.12■■■□□ 2.09
COL9A2-211ENST00000496215 PCDH11YQ9BZA8 1340 aa28.12■■■□□ 2.09
COL9A2-211ENST00000496215 TOGARAM1Q9Y4F4 1720 aa28.12■■■□□ 2.09
COL9A2-211ENST00000496215 CASZ1Q86V15 1759 aa28.11■■■□□ 2.09
COL9A2-211ENST00000496215 NBPF14Q5TI25 921 aa28.1■■■□□ 2.09
COL9A2-211ENST00000496215 NPC1L1Q9UHC9 1359 aa28.1■■■□□ 2.09
COL9A2-211ENST00000496215 CC2D1BQ5T0F9 858 aaKnown RBP28.08■■■□□ 2.09
COL9A2-211ENST00000496215 CYP27B1O15528 508 aa28.07■■■□□ 2.08
COL9A2-211ENST00000496215 PRIM1P49642 420 aaKnown RBP28.07■■■□□ 2.08
COL9A2-211ENST00000496215 LY75O60449 1722 aa28.06■■■□□ 2.08
COL9A2-211ENST00000496215 IGSF1Q8N6C5 1336 aa28.06■■■□□ 2.08
COL9A2-211ENST00000496215 PLEKHG2Q9H7P9 1386 aa28.05■■■□□ 2.08
COL9A2-211ENST00000496215 PDGFDQ9GZP0 370 aaPredicted RBP28.04■■■□□ 2.08
COL9A2-211ENST00000496215 LRRC4BQ9NT99 713 aa28.04■■■□□ 2.08
COL9A2-211ENST00000496215 SYTL4Q96C24 671 aaPredicted RBP28.03■■■□□ 2.08
COL9A2-211ENST00000496215 ITGB4P16144 1822 aa28.02■■■□□ 2.08
COL9A2-211ENST00000496215 SPG7Q9UQ90 795 aa28.01■■■□□ 2.07
COL9A2-211ENST00000496215 CNGB1Q14028 1251 aaPredicted RBP27.99■■■□□ 2.07
COL9A2-211ENST00000496215 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.98■■■□□ 2.07
COL9A2-211ENST00000496215 MTHFSP49914 203 aa27.97■■■□□ 2.07
COL9A2-211ENST00000496215 KCNQ4P56696 695 aa27.97■■■□□ 2.07
COL9A2-211ENST00000496215 SLC15A2Q16348 729 aa27.97■■■□□ 2.07
COL9A2-211ENST00000496215 TUBGCP6Q96RT7 1819 aa27.97■■■□□ 2.07
COL9A2-211ENST00000496215 ZNF827Q17R98 1081 aa27.96■■■□□ 2.07
COL9A2-211ENST00000496215 AEBP1Q8IUX7 1158 aa27.95■■■□□ 2.06
COL9A2-211ENST00000496215 STK32BQ9NY57 414 aa27.95■■■□□ 2.06
COL9A2-211ENST00000496215 IL13P35225 146 aa27.94■■■□□ 2.06
COL9A2-211ENST00000496215 NKX1-1Q15270 411 aaPredicted RBP27.94■■■□□ 2.06
COL9A2-211ENST00000496215 KDRP35968 1356 aa27.93■■■□□ 2.06
COL9A2-211ENST00000496215 COL3A1P02461 1466 aaPredicted RBP27.93■■■□□ 2.06
COL9A2-211ENST00000496215 QSER1Q2KHR3 1735 aa27.92■■■□□ 2.06
COL9A2-211ENST00000496215 PHKG2P15735 406 aa27.91■■■□□ 2.06
COL9A2-211ENST00000496215 SLC27A3Q5K4L6 730 aa27.91■■■□□ 2.06
COL9A2-211ENST00000496215 IFNL2Q8IZJ0 200 aa27.9■■■□□ 2.06
COL9A2-211ENST00000496215 AKT1S1Q96B36 256 aa27.9■■■□□ 2.06
COL9A2-211ENST00000496215 SULT6B1Q6IMI4 303 aa27.89■■■□□ 2.06
COL9A2-211ENST00000496215 MPRIPQ6WCQ1 1025 aa27.88■■■□□ 2.05
COL9A2-211ENST00000496215 TAF1LQ8IZX4 1826 aa27.88■■■□□ 2.05
COL9A2-211ENST00000496215 C5P01031 1676 aa27.87■■■□□ 2.05
COL9A2-211ENST00000496215 DIAPH1O60610 1272 aaKnown RBP27.87■■■□□ 2.05
COL9A2-211ENST00000496215 ZBTB7AO95365 584 aa27.87■■■□□ 2.05
COL9A2-211ENST00000496215 PLEKHO1Q53GL0 409 aaPredicted RBP27.87■■■□□ 2.05
COL9A2-211ENST00000496215 SPON1Q9HCB6 807 aa27.87■■■□□ 2.05
COL9A2-211ENST00000496215 AMOTQ4VCS5 1084 aa27.86■■■□□ 2.05
COL9A2-211ENST00000496215 PIGBQ92521 554 aa27.86■■■□□ 2.05
COL9A2-211ENST00000496215 PALLDQ8WX93 1383 aa27.86■■■□□ 2.05
COL9A2-211ENST00000496215 CCNL1Q9UK58 526 aaPredicted RBP27.85■■■□□ 2.05
COL9A2-211ENST00000496215 ZNF530Q6P9A1 599 aaPredicted RBP27.84■■■□□ 2.05
COL9A2-211ENST00000496215 KDM6AO15550 1401 aaPredicted RBP27.84■■■□□ 2.05
COL9A2-211ENST00000496215 PTGER2P43116 358 aa27.82■■■□□ 2.04
COL9A2-211ENST00000496215 HSP90AB1P08238 724 aaKnown RBP27.81■■■□□ 2.04
COL9A2-211ENST00000496215 TMOD3Q9NYL9 352 aa27.81■■■□□ 2.04
COL9A2-211ENST00000496215 PNPLA7Q6ZV29 1317 aa27.81■■■□□ 2.04
COL9A2-211ENST00000496215 HMOX1P09601 288 aa27.8■■■□□ 2.04
COL9A2-211ENST00000496215 CFAP53Q96M91 514 aa27.8■■■□□ 2.04
COL9A2-211ENST00000496215 ATF5Q9Y2D1 282 aaPredicted RBP27.8■■■□□ 2.04
COL9A2-211ENST00000496215 C1orf141Q5JVX7 400 aa27.79■■■□□ 2.04
COL9A2-211ENST00000496215 SCN11AQ9UI33 1791 aa27.78■■■□□ 2.04
COL9A2-211ENST00000496215 COL24A1Q17RW2 1714 aa27.78■■■□□ 2.04
COL9A2-211ENST00000496215 SMARCC1Q92922 1105 aaPredicted RBP27.78■■■□□ 2.04
COL9A2-211ENST00000496215 DCAF5Q96JK2 942 aa27.78■■■□□ 2.04
COL9A2-211ENST00000496215 SGIP1Q9BQI5 828 aa27.78■■■□□ 2.04
COL9A2-211ENST00000496215 PPP2R1AP30153 589 aa27.77■■■□□ 2.04
COL9A2-211ENST00000496215 C4BP0C0L5 1744 aa27.77■■■□□ 2.04
COL9A2-211ENST00000496215 VIRMAQ69YN4 1812 aaKnown RBP27.76■■■□□ 2.04
COL9A2-211ENST00000496215 U2SURPO15042 1029 aaKnown RBP27.76■■■□□ 2.03
COL9A2-211ENST00000496215 MTFR1LQ9H019 292 aa27.76■■■□□ 2.03
COL9A2-211ENST00000496215 ASAP1Q9ULH1 1129 aa27.76■■■□□ 2.03
COL9A2-211ENST00000496215 ZEB1P37275 1124 aaPredicted RBP27.75■■■□□ 2.03
COL9A2-211ENST00000496215 TFCP2L1Q9NZI6 479 aa27.74■■■□□ 2.03
COL9A2-211ENST00000496215 ERVV-2B6SEH9 535 aa27.73■■■□□ 2.03
COL9A2-211ENST00000496215 ATG3Q9NT62 314 aa27.73■■■□□ 2.03
COL9A2-211ENST00000496215 PPP1R1BQ9UD71 204 aaPredicted RBP27.72■■■□□ 2.03
COL9A2-211ENST00000496215 UBR3Q6ZT12 1888 aa27.72■■■□□ 2.03
COL9A2-211ENST00000496215 AMIGO3Q86WK7 504 aa27.71■■■□□ 2.03
COL9A2-211ENST00000496215 ZNF831Q5JPB2 1677 aa27.71■■■□□ 2.03
COL9A2-211ENST00000496215 ADAMTS7Q9UKP4 1686 aa27.71■■■□□ 2.03
COL9A2-211ENST00000496215 HMGB2P26583 209 aaKnown RBP27.7■■■□□ 2.02
COL9A2-211ENST00000496215 AKAP4Q5JQC9 854 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms