RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 HTATSF1O43719 755 aaKnown RBP21.13■□□□□ 0.97
HLA-A-208ENST00000496081 CRB1P82279 1406 aa21.13■□□□□ 0.97
HLA-A-208ENST00000496081 FRAT1Q92837 279 aaPredicted RBP21.13■□□□□ 0.97
HLA-A-208ENST00000496081 CPDO75976 1380 aa21.12■□□□□ 0.97
HLA-A-208ENST00000496081 PDE3AQ14432 1141 aa21.12■□□□□ 0.97
HLA-A-208ENST00000496081 GNAT3A8MTJ3 354 aa21.11■□□□□ 0.97
HLA-A-208ENST00000496081 CHL1O00533 1208 aa21.11■□□□□ 0.97
HLA-A-208ENST00000496081 CANXP27824 592 aaKnown RBP21.11■□□□□ 0.97
HLA-A-208ENST00000496081 SSH1Q8WYL5 1049 aa21.11■□□□□ 0.97
HLA-A-208ENST00000496081 ROBO1Q9Y6N7 1651 aa21.11■□□□□ 0.97
HLA-A-208ENST00000496081 ABCC6O95255 1503 aa21.11■□□□□ 0.97
HLA-A-208ENST00000496081 KIAA0232Q92628 1395 aa21.11■□□□□ 0.97
HLA-A-208ENST00000496081 SMC4Q9NTJ3 1288 aa21.1■□□□□ 0.97
HLA-A-208ENST00000496081 LMO7Q8WWI1 1683 aa21.09■□□□□ 0.97
HLA-A-208ENST00000496081 MAP3K5Q99683 1374 aa21.09■□□□□ 0.97
HLA-A-208ENST00000496081 VAMP4O75379 141 aa21.09■□□□□ 0.97
HLA-A-208ENST00000496081 CHRNA2Q15822 529 aa21.09■□□□□ 0.97
HLA-A-208ENST00000496081 TSPYL6Q8N831 410 aa21.09■□□□□ 0.97
HLA-A-208ENST00000496081 ZNF428Q96B54 188 aa21.09■□□□□ 0.97
HLA-A-208ENST00000496081 ALDH1L2Q3SY69 923 aa21.08■□□□□ 0.96
HLA-A-208ENST00000496081 LRRC37A3O60309 1634 aa21.07■□□□□ 0.96
HLA-A-208ENST00000496081 C8orf58Q8NAV2 365 aa21.07■□□□□ 0.96
HLA-A-208ENST00000496081 PANK1Q8TE04 598 aa21.07■□□□□ 0.96
HLA-A-208ENST00000496081 ABCA3Q99758 1704 aa21.07■□□□□ 0.96
HLA-A-208ENST00000496081 IL17REQ8NFR9 667 aa21.06■□□□□ 0.96
HLA-A-208ENST00000496081 ELL2O00472 640 aaPredicted RBP21.05■□□□□ 0.96
HLA-A-208ENST00000496081 TWISTNBQ3B726 338 aaPredicted RBP21.05■□□□□ 0.96
HLA-A-208ENST00000496081 TNNQ9UQP3 1299 aa21.05■□□□□ 0.96
HLA-A-208ENST00000496081 AMOTQ4VCS5 1084 aa21.05■□□□□ 0.96
HLA-A-208ENST00000496081 PLEKHO1Q53GL0 409 aaPredicted RBP21.05■□□□□ 0.96
HLA-A-208ENST00000496081 ZKSCAN2Q63HK3 967 aa21.05■□□□□ 0.96
HLA-A-208ENST00000496081 FAM208AQ9UK61 1670 aaKnown RBP21.04■□□□□ 0.96
HLA-A-208ENST00000496081 NLRP2Q9NX02 1062 aa21.04■□□□□ 0.96
HLA-A-208ENST00000496081 MIS18AQ9NYP9 233 aa21.03■□□□□ 0.96
HLA-A-208ENST00000496081 RLBP1P12271 317 aa21.02■□□□□ 0.96
HLA-A-208ENST00000496081 HAP1P54257 671 aaPredicted RBP21.02■□□□□ 0.96
HLA-A-208ENST00000496081 BRPF1P55201 1214 aaPredicted RBP21.02■□□□□ 0.96
HLA-A-208ENST00000496081 PRDM11Q9NQV5 511 aa21.02■□□□□ 0.96
HLA-A-208ENST00000496081 COG6Q9Y2V7 657 aa21.02■□□□□ 0.96
HLA-A-208ENST00000496081 CSB-PGBD3P0DP91 1061 aa21.02■□□□□ 0.96
HLA-A-208ENST00000496081 NOB1Q9ULX3 412 aaKnown RBP21.02■□□□□ 0.96
HLA-A-208ENST00000496081 KIF16BQ96L93 1317 aa21.01■□□□□ 0.95
HLA-A-208ENST00000496081 AHDC1Q5TGY3 1603 aaPredicted RBP21.01■□□□□ 0.95
HLA-A-208ENST00000496081 KRT24Q2M2I5 525 aa21.01■□□□□ 0.95
HLA-A-208ENST00000496081 ZNF530Q6P9A1 599 aaPredicted RBP21.01■□□□□ 0.95
HLA-A-208ENST00000496081 CLUAP1Q96AJ1 413 aa21.01■□□□□ 0.95
HLA-A-208ENST00000496081 TSPYL4Q9UJ04 414 aa21.01■□□□□ 0.95
HLA-A-208ENST00000496081 CEMIPQ8WUJ3 1361 aa21.01■□□□□ 0.95
HLA-A-208ENST00000496081 AKAP4Q5JQC9 854 aa21■□□□□ 0.95
HLA-A-208ENST00000496081 TRIM27P14373 513 aa21■□□□□ 0.95
HLA-A-208ENST00000496081 MRPL50Q8N5N7 158 aaKnown RBP21■□□□□ 0.95
HLA-A-208ENST00000496081 FBXO41Q8TF61 875 aa21■□□□□ 0.95
HLA-A-208ENST00000496081 ATF7IPQ6VMQ6 1270 aa20.99■□□□□ 0.95
HLA-A-208ENST00000496081 DZIP1LQ8IYY4 767 aaKnown RBP20.99■□□□□ 0.95
HLA-A-208ENST00000496081 MS4A1P11836 297 aa20.98■□□□□ 0.95
HLA-A-208ENST00000496081 RAPGEF4Q8WZA2 1011 aa20.98■□□□□ 0.95
HLA-A-208ENST00000496081 LGR6Q9HBX8 967 aa20.98■□□□□ 0.95
HLA-A-208ENST00000496081 PHLPP1O60346 1717 aa20.98■□□□□ 0.95
HLA-A-208ENST00000496081 IPO8O15397 1037 aaKnown RBP20.97■□□□□ 0.95
HLA-A-208ENST00000496081 HSPA1LP34931 641 aa20.97■□□□□ 0.95
HLA-A-208ENST00000496081 TAF7Q15545 349 aaPredicted RBP20.97■□□□□ 0.95
HLA-A-208ENST00000496081 BABAM1Q9NWV8 329 aa20.97■□□□□ 0.95
HLA-A-208ENST00000496081 TCERG1O14776 1098 aaKnown RBP20.96■□□□□ 0.95
HLA-A-208ENST00000496081 C1orf141Q5JVX7 400 aa20.96■□□□□ 0.95
HLA-A-208ENST00000496081 FTSJ3Q8IY81 847 aaKnown RBP20.96■□□□□ 0.95
HLA-A-208ENST00000496081 MEGF6O75095 1541 aa20.95■□□□□ 0.94
HLA-A-208ENST00000496081 TATP17735 454 aaPredicted RBP20.95■□□□□ 0.94
HLA-A-208ENST00000496081 WDR17Q8IZU2 1322 aa20.95■□□□□ 0.94
HLA-A-208ENST00000496081 COL5A2P05997 1499 aaPredicted RBP20.95■□□□□ 0.94
HLA-A-208ENST00000496081 VIRMAQ69YN4 1812 aaKnown RBP20.95■□□□□ 0.94
HLA-A-208ENST00000496081 MVPQ14764 893 aaKnown RBP20.95■□□□□ 0.94
HLA-A-208ENST00000496081 MPRIPQ6WCQ1 1025 aa20.95■□□□□ 0.94
HLA-A-208ENST00000496081 PLEKHG2Q9H7P9 1386 aa20.93■□□□□ 0.94
HLA-A-208ENST00000496081 RNMTO43148 476 aaKnown RBP20.93■□□□□ 0.94
HLA-A-208ENST00000496081 ARHGAP45Q92619 1136 aa20.93■□□□□ 0.94
HLA-A-208ENST00000496081 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.93■□□□□ 0.94
HLA-A-208ENST00000496081 COL22A1Q8NFW1 1626 aaPredicted RBP20.93■□□□□ 0.94
HLA-A-208ENST00000496081 OVOS2A0A0G2JMS6 1433 aa20.92■□□□□ 0.94
HLA-A-208ENST00000496081 AAMPQ13685 434 aa20.92■□□□□ 0.94
HLA-A-208ENST00000496081 SPG7Q9UQ90 795 aa20.92■□□□□ 0.94
HLA-A-208ENST00000496081 COL16A1Q07092 1604 aaPredicted RBP20.91■□□□□ 0.94
HLA-A-208ENST00000496081 KDM2BQ8NHM5 1336 aa20.91■□□□□ 0.94
HLA-A-208ENST00000496081 ADAMTS7Q9UKP4 1686 aa20.91■□□□□ 0.94
HLA-A-208ENST00000496081 TEFQ10587 303 aa20.9■□□□□ 0.94
HLA-A-208ENST00000496081 TOM1L2Q6ZVM7 507 aa20.9■□□□□ 0.94
HLA-A-208ENST00000496081 PKD1L3Q7Z443 1732 aa20.9■□□□□ 0.94
HLA-A-208ENST00000496081 TMEM57Q8N5G2 664 aa20.9■□□□□ 0.94
HLA-A-208ENST00000496081 KDM3BQ7LBC6 1761 aa20.89■□□□□ 0.93
HLA-A-208ENST00000496081 PHKG2P15735 406 aa20.88■□□□□ 0.93
HLA-A-208ENST00000496081 CENPQQ7L2Z9 268 aaPredicted RBP20.87■□□□□ 0.93
HLA-A-208ENST00000496081 ITPRIPQ8IWB1 547 aa20.87■□□□□ 0.93
HLA-A-208ENST00000496081 CARD10Q9BWT7 1032 aa20.87■□□□□ 0.93
HLA-A-208ENST00000496081 STRN4Q9NRL3 753 aa20.87■□□□□ 0.93
HLA-A-208ENST00000496081 DDX19BQ9UMR2 479 aa20.87■□□□□ 0.93
HLA-A-208ENST00000496081 SOS1Q07889 1333 aaPredicted RBP20.87■□□□□ 0.93
HLA-A-208ENST00000496081 EVA1CP58658 441 aa20.87■□□□□ 0.93
HLA-A-208ENST00000496081 TSHZ2Q9NRE2 1034 aa20.87■□□□□ 0.93
HLA-A-208ENST00000496081 SIPA1L3O60292 1781 aaPredicted RBP20.87■□□□□ 0.93
HLA-A-208ENST00000496081 BTBD11A6QL63 1104 aa20.86■□□□□ 0.93
HLA-A-208ENST00000496081 LARP1Q6PKG0 1096 aaKnown RBP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms