RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 COL5A2P05997 1499 aaPredicted RBP31.62■■■□□ 2.65
PPP1R3F-205ENST00000495799 WDR17Q8IZU2 1322 aa31.61■■■□□ 2.65
PPP1R3F-205ENST00000495799 RAPGEF4Q8WZA2 1011 aa31.6■■■□□ 2.65
PPP1R3F-205ENST00000495799 CFAP44Q96MT7 982 aa31.6■■■□□ 2.65
PPP1R3F-205ENST00000495799 FAM83GA6ND36 823 aa31.59■■■□□ 2.65
PPP1R3F-205ENST00000495799 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.59■■■□□ 2.65
PPP1R3F-205ENST00000495799 THUMPD2Q9BTF0 503 aaKnown RBP31.59■■■□□ 2.65
PPP1R3F-205ENST00000495799 ZNF853P0CG23 659 aa31.59■■■□□ 2.65
PPP1R3F-205ENST00000495799 TSR2Q969E8 191 aaKnown RBP31.59■■■□□ 2.65
PPP1R3F-205ENST00000495799 LAS1LQ9Y4W2 734 aaKnown RBP31.59■■■□□ 2.65
PPP1R3F-205ENST00000495799 LRRC37A3O60309 1634 aa31.57■■■□□ 2.64
PPP1R3F-205ENST00000495799 DCTN1Q14203 1278 aa31.57■■■□□ 2.64
PPP1R3F-205ENST00000495799 TATP17735 454 aaPredicted RBP31.56■■■□□ 2.64
PPP1R3F-205ENST00000495799 MCM10Q7L590 875 aa31.56■■■□□ 2.64
PPP1R3F-205ENST00000495799 EVA1CP58658 441 aa31.54■■■□□ 2.64
PPP1R3F-205ENST00000495799 AKAP4Q5JQC9 854 aa31.54■■■□□ 2.64
PPP1R3F-205ENST00000495799 EXOSC9Q06265 439 aaKnown RBP31.54■■■□□ 2.64
PPP1R3F-205ENST00000495799 ZNF530Q6P9A1 599 aaPredicted RBP31.54■■■□□ 2.64
PPP1R3F-205ENST00000495799 TOM1L2Q6ZVM7 507 aa31.54■■■□□ 2.64
PPP1R3F-205ENST00000495799 CRB1P82279 1406 aa31.53■■■□□ 2.64
PPP1R3F-205ENST00000495799 C1orf141Q5JVX7 400 aa31.53■■■□□ 2.64
PPP1R3F-205ENST00000495799 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.53■■■□□ 2.64
PPP1R3F-205ENST00000495799 PARP4Q9UKK3 1724 aaKnown RBP31.52■■■□□ 2.64
PPP1R3F-205ENST00000495799 MBIPQ9NS73 344 aa31.51■■■□□ 2.63
PPP1R3F-205ENST00000495799 IRX6P78412 446 aaPredicted RBP31.5■■■□□ 2.63
PPP1R3F-205ENST00000495799 ZNF428Q96B54 188 aa31.5■■■□□ 2.63
PPP1R3F-205ENST00000495799 CARD10Q9BWT7 1032 aa31.5■■■□□ 2.63
PPP1R3F-205ENST00000495799 SPG7Q9UQ90 795 aa31.5■■■□□ 2.63
PPP1R3F-205ENST00000495799 OVOS2A0A0G2JMS6 1433 aa31.49■■■□□ 2.63
PPP1R3F-205ENST00000495799 PKD1L3Q7Z443 1732 aa31.49■■■□□ 2.63
PPP1R3F-205ENST00000495799 JCADQ9P266 1359 aa31.48■■■□□ 2.63
PPP1R3F-205ENST00000495799 MEGF6O75095 1541 aa31.48■■■□□ 2.63
PPP1R3F-205ENST00000495799 CHL1O00533 1208 aa31.48■■■□□ 2.63
PPP1R3F-205ENST00000495799 RARSP54136 660 aaKnown RBP31.48■■■□□ 2.63
PPP1R3F-205ENST00000495799 STRN4Q9NRL3 753 aa31.48■■■□□ 2.63
PPP1R3F-205ENST00000495799 BABAM1Q9NWV8 329 aa31.48■■■□□ 2.63
PPP1R3F-205ENST00000495799 BTG4Q9NY30 223 aa31.47■■■□□ 2.63
PPP1R3F-205ENST00000495799 PLCH1Q4KWH8 1693 aa31.44■■■□□ 2.62
PPP1R3F-205ENST00000495799 CEMIPQ8WUJ3 1361 aa31.44■■■□□ 2.62
PPP1R3F-205ENST00000495799 IL17REQ8NFR9 667 aa31.44■■■□□ 2.62
PPP1R3F-205ENST00000495799 LARP1Q6PKG0 1096 aaKnown RBP31.42■■■□□ 2.62
PPP1R3F-205ENST00000495799 TSPYL4Q9UJ04 414 aa31.42■■■□□ 2.62
PPP1R3F-205ENST00000495799 VIRMAQ69YN4 1812 aaKnown RBP31.41■■■□□ 2.62
PPP1R3F-205ENST00000495799 BCAR3O75815 825 aa31.41■■■□□ 2.62
PPP1R3F-205ENST00000495799 ALDH1L2Q3SY69 923 aa31.41■■■□□ 2.62
PPP1R3F-205ENST00000495799 TAF7Q15545 349 aaPredicted RBP31.4■■■□□ 2.62
PPP1R3F-205ENST00000495799 ADAMTS7Q9UKP4 1686 aa31.4■■■□□ 2.62
PPP1R3F-205ENST00000495799 NWD2Q9ULI1 1742 aa31.39■■■□□ 2.62
PPP1R3F-205ENST00000495799 ADAMTS2O95450 1211 aa31.39■■■□□ 2.61
PPP1R3F-205ENST00000495799 IL2RBP14784 551 aa31.39■■■□□ 2.61
PPP1R3F-205ENST00000495799 CANXP27824 592 aaKnown RBP31.39■■■□□ 2.61
PPP1R3F-205ENST00000495799 IFNL2Q8IZJ0 200 aa31.39■■■□□ 2.61
PPP1R3F-205ENST00000495799 NUTM2BA6NNL0 878 aaPredicted RBP31.38■■■□□ 2.61
PPP1R3F-205ENST00000495799 NUTM2EB1AL46 878 aaPredicted RBP31.38■■■□□ 2.61
PPP1R3F-205ENST00000495799 PLIN1O60240 522 aa31.38■■■□□ 2.61
PPP1R3F-205ENST00000495799 HSP90AB1P08238 724 aaKnown RBP31.38■■■□□ 2.61
PPP1R3F-205ENST00000495799 NUTM2AQ8IVF1 878 aaPredicted RBP31.38■■■□□ 2.61
PPP1R3F-205ENST00000495799 RNMTO43148 476 aaKnown RBP31.37■■■□□ 2.61
PPP1R3F-205ENST00000495799 TEFQ10587 303 aa31.37■■■□□ 2.61
PPP1R3F-205ENST00000495799 TWISTNBQ3B726 338 aaPredicted RBP31.37■■■□□ 2.61
PPP1R3F-205ENST00000495799 NRAPQ86VF7 1730 aa31.36■■■□□ 2.61
PPP1R3F-205ENST00000495799 SMC4Q9NTJ3 1288 aa31.36■■■□□ 2.61
PPP1R3F-205ENST00000495799 PHKG2P15735 406 aa31.35■■■□□ 2.61
PPP1R3F-205ENST00000495799 PPP4R2Q9NY27 417 aa31.35■■■□□ 2.61
PPP1R3F-205ENST00000495799 SPATA31A6Q5VVP1 1343 aa31.35■■■□□ 2.61
PPP1R3F-205ENST00000495799 VAMP4O75379 141 aa31.34■■■□□ 2.61
PPP1R3F-205ENST00000495799 MPRIPQ6WCQ1 1025 aa31.34■■■□□ 2.61
PPP1R3F-205ENST00000495799 SCN11AQ9UI33 1791 aa31.34■■■□□ 2.61
PPP1R3F-205ENST00000495799 PCDH11XQ9BZA7 1347 aa31.34■■■□□ 2.61
PPP1R3F-205ENST00000495799 PCDH11YQ9BZA8 1340 aa31.34■■■□□ 2.61
PPP1R3F-205ENST00000495799 SOS1Q07889 1333 aaPredicted RBP31.33■■■□□ 2.61
PPP1R3F-205ENST00000495799 ZCRB1Q8TBF4 217 aaKnown RBP31.33■■■□□ 2.61
PPP1R3F-205ENST00000495799 LGR6Q9HBX8 967 aa31.33■■■□□ 2.61
PPP1R3F-205ENST00000495799 KIF16BQ96L93 1317 aa31.32■■■□□ 2.6
PPP1R3F-205ENST00000495799 C8orf58Q8NAV2 365 aa31.32■■■□□ 2.6
PPP1R3F-205ENST00000495799 MS4A1P11836 297 aa31.31■■■□□ 2.6
PPP1R3F-205ENST00000495799 PDE3AQ14432 1141 aa31.31■■■□□ 2.6
PPP1R3F-205ENST00000495799 SSH1Q8WYL5 1049 aa31.31■■■□□ 2.6
PPP1R3F-205ENST00000495799 KDM3BQ7LBC6 1761 aa31.31■■■□□ 2.6
PPP1R3F-205ENST00000495799 TSPYL6Q8N831 410 aa31.3■■■□□ 2.6
PPP1R3F-205ENST00000495799 BCL2L13Q9BXK5 485 aa31.3■■■□□ 2.6
PPP1R3F-205ENST00000495799 SIPA1L3O60292 1781 aaPredicted RBP31.29■■■□□ 2.6
PPP1R3F-205ENST00000495799 BRPF1P55201 1214 aaPredicted RBP31.29■■■□□ 2.6
PPP1R3F-205ENST00000495799 FRAT1Q92837 279 aaPredicted RBP31.29■■■□□ 2.6
PPP1R3F-205ENST00000495799 DCAF5Q96JK2 942 aa31.29■■■□□ 2.6
PPP1R3F-205ENST00000495799 SLIT2O94813 1529 aa31.29■■■□□ 2.6
PPP1R3F-205ENST00000495799 MIS18AQ9NYP9 233 aa31.29■■■□□ 2.6
PPP1R3F-205ENST00000495799 WNK3Q9BYP7 1800 aa31.28■■■□□ 2.6
PPP1R3F-205ENST00000495799 IPO8O15397 1037 aaKnown RBP31.27■■■□□ 2.6
PPP1R3F-205ENST00000495799 ZKSCAN2Q63HK3 967 aa31.27■■■□□ 2.6
PPP1R3F-205ENST00000495799 KDM6AO15550 1401 aaPredicted RBP31.26■■■□□ 2.59
PPP1R3F-205ENST00000495799 ELL2O00472 640 aaPredicted RBP31.26■■■□□ 2.59
PPP1R3F-205ENST00000495799 CYP27B1O15528 508 aa31.26■■■□□ 2.59
PPP1R3F-205ENST00000495799 BTBD11A6QL63 1104 aa31.25■■■□□ 2.59
PPP1R3F-205ENST00000495799 USP35Q9P2H5 1018 aa31.25■■■□□ 2.59
PPP1R3F-205ENST00000495799 THRAP3Q9Y2W1 955 aaKnown RBP31.25■■■□□ 2.59
PPP1R3F-205ENST00000495799 MRC1P22897 1456 aa31.25■■■□□ 2.59
PPP1R3F-205ENST00000495799 DISP2A7MBM2 1401 aa31.25■■■□□ 2.59
PPP1R3F-205ENST00000495799 SHANK3Q9BYB0 1731 aa31.24■■■□□ 2.59
PPP1R3F-205ENST00000495799 CRBNQ96SW2 442 aa31.24■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms