RNA–Protein interactions for RNA: ENST00000495749.1

TM9SF4-207, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 3,023 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-207ENST00000495749 MED14O60244 1454 aa11.37□□□□□ -0.59
TM9SF4-207ENST00000495749 SOCS7O14512 581 aa11.36□□□□□ -0.59
TM9SF4-207ENST00000495749 ZNF853P0CG23 659 aa11.36□□□□□ -0.59
TM9SF4-207ENST00000495749 ZC3H6P61129 1189 aaKnown RBP11.36□□□□□ -0.59
TM9SF4-207ENST00000495749 TECPR2O15040 1411 aa11.36□□□□□ -0.59
TM9SF4-207ENST00000495749 AATKQ6ZMQ8 1374 aa11.36□□□□□ -0.59
TM9SF4-207ENST00000495749 ZNF142P52746 1687 aaPredicted RBP11.36□□□□□ -0.59
TM9SF4-207ENST00000495749 ZBTB7BO15156 539 aaPredicted RBP11.36□□□□□ -0.59
TM9SF4-207ENST00000495749 EIF2S2P20042 333 aaKnown RBP11.36□□□□□ -0.59
TM9SF4-207ENST00000495749 UBR1Q8IWV7 1749 aa11.36□□□□□ -0.59
TM9SF4-207ENST00000495749 HOXC9P31274 260 aa11.35□□□□□ -0.59
TM9SF4-207ENST00000495749 SMC5Q8IY18 1101 aa11.35□□□□□ -0.59
TM9SF4-207ENST00000495749 CHMP5Q9NZZ3 219 aa11.35□□□□□ -0.59
TM9SF4-207ENST00000495749 SETD1BQ9UPS6 1966 aaKnown RBP11.35□□□□□ -0.59
TM9SF4-207ENST00000495749 ALDH1L2Q3SY69 923 aa11.35□□□□□ -0.59
TM9SF4-207ENST00000495749 GOLGA6L3A6NEY3 463 aa11.35□□□□□ -0.59
TM9SF4-207ENST00000495749 C16orf71Q8IYS4 520 aaPredicted RBP11.35□□□□□ -0.59
TM9SF4-207ENST00000495749 ANXA1P04083 346 aa11.34□□□□□ -0.59
TM9SF4-207ENST00000495749 XRCC6P12956 609 aaKnown RBP eCLIP11.34□□□□□ -0.59
TM9SF4-207ENST00000495749 HSCBQ8IWL3 235 aa11.34□□□□□ -0.59
TM9SF4-207ENST00000495749 CABLES1Q8TDN4 633 aa11.34□□□□□ -0.59
TM9SF4-207ENST00000495749 ADGRB2O60241 1585 aa11.34□□□□□ -0.59
TM9SF4-207ENST00000495749 SETD1AO15047 1707 aaKnown RBP11.34□□□□□ -0.59
TM9SF4-207ENST00000495749 CDC42BPGQ6DT37 1551 aa11.34□□□□□ -0.59
TM9SF4-207ENST00000495749 SIRT2Q8IXJ6 389 aa11.34□□□□□ -0.59
TM9SF4-207ENST00000495749 CHL1O00533 1208 aa11.33□□□□□ -0.6
TM9SF4-207ENST00000495749 NBPF6Q5VWK0 638 aa11.33□□□□□ -0.6
TM9SF4-207ENST00000495749 NBPF4Q96M43 638 aa11.33□□□□□ -0.6
TM9SF4-207ENST00000495749 RRAGDQ9NQL2 400 aaPredicted RBP11.33□□□□□ -0.6
TM9SF4-207ENST00000495749 SMARCA5O60264 1052 aaPredicted RBP11.33□□□□□ -0.6
TM9SF4-207ENST00000495749 TRAK2O60296 914 aa11.33□□□□□ -0.6
TM9SF4-207ENST00000495749 LGR6Q9HBX8 967 aa11.33□□□□□ -0.6
TM9SF4-207ENST00000495749 CDK12Q9NYV4 1490 aaPredicted RBP11.33□□□□□ -0.6
TM9SF4-207ENST00000495749 MEIS3Q99687 375 aa11.33□□□□□ -0.6
TM9SF4-207ENST00000495749 PANK2Q9BZ23 570 aa11.33□□□□□ -0.6
TM9SF4-207ENST00000495749 MPRIPQ6WCQ1 1025 aa11.32□□□□□ -0.6
TM9SF4-207ENST00000495749 IL17REQ8NFR9 667 aa11.32□□□□□ -0.6
TM9SF4-207ENST00000495749 OVOS2A0A0J9YW53 1432 aa11.31□□□□□ -0.6
TM9SF4-207ENST00000495749 OVOS2Q6IE36 1432 aa11.31□□□□□ -0.6
TM9SF4-207ENST00000495749 KCNQ3O43525 872 aa11.31□□□□□ -0.6
TM9SF4-207ENST00000495749 NUCB1Q02818 461 aa11.31□□□□□ -0.6
TM9SF4-207ENST00000495749 CHD1LQ86WJ1 897 aa11.31□□□□□ -0.6
TM9SF4-207ENST00000495749 OTUD7AQ8TE49 926 aaPredicted RBP11.31□□□□□ -0.6
TM9SF4-207ENST00000495749 TTC21AQ8NDW8 1320 aa11.31□□□□□ -0.6
TM9SF4-207ENST00000495749 FLT4P35916 1363 aa11.31□□□□□ -0.6
TM9SF4-207ENST00000495749 FKBP5Q13451 457 aaPredicted RBP11.31□□□□□ -0.6
TM9SF4-207ENST00000495749 FSD2A1L4K1 749 aa11.3□□□□□ -0.6
TM9SF4-207ENST00000495749 KIF20BQ96Q89 1820 aa11.3□□□□□ -0.6
TM9SF4-207ENST00000495749 GNAT3A8MTJ3 354 aa11.3□□□□□ -0.6
TM9SF4-207ENST00000495749 API5Q9BZZ5 524 aaKnown RBP11.3□□□□□ -0.6
TM9SF4-207ENST00000495749 TSHZ3Q63HK5 1081 aa11.3□□□□□ -0.6
TM9SF4-207ENST00000495749 KLHL34Q8N239 644 aa11.3□□□□□ -0.6
TM9SF4-207ENST00000495749 CEP170BQ9Y4F5 1589 aaPredicted RBP11.29□□□□□ -0.6
TM9SF4-207ENST00000495749 CHRNA2Q15822 529 aa11.29□□□□□ -0.6
TM9SF4-207ENST00000495749 FOXD4L1Q9NU39 408 aa11.29□□□□□ -0.6
TM9SF4-207ENST00000495749 AXIN2Q9Y2T1 843 aa11.29□□□□□ -0.6
TM9SF4-207ENST00000495749 SBNO1A3KN83 1393 aa11.29□□□□□ -0.6
TM9SF4-207ENST00000495749 GCP02774 474 aa11.28□□□□□ -0.6
TM9SF4-207ENST00000495749 RBM25P49756 843 aaKnown RBP11.28□□□□□ -0.6
TM9SF4-207ENST00000495749 GAS2L2Q8NHY3 880 aa11.28□□□□□ -0.6
TM9SF4-207ENST00000495749 HSP90AB1P08238 724 aaKnown RBP11.28□□□□□ -0.6
TM9SF4-207ENST00000495749 STK31Q9BXU1 1019 aa11.28□□□□□ -0.6
TM9SF4-207ENST00000495749 PHAXQ9H814 394 aaKnown RBP11.28□□□□□ -0.6
TM9SF4-207ENST00000495749 KRT28Q7Z3Y7 464 aa11.27□□□□□ -0.6
TM9SF4-207ENST00000495749 USP31Q70CQ4 1352 aa11.27□□□□□ -0.61
TM9SF4-207ENST00000495749 IGSF1Q8N6C5 1336 aa11.27□□□□□ -0.61
TM9SF4-207ENST00000495749 DDX11L8A8MPP1 907 aa11.27□□□□□ -0.61
TM9SF4-207ENST00000495749 UBE2Q2Q8WVN8 375 aa11.27□□□□□ -0.61
TM9SF4-207ENST00000495749 HSP90AA1P07900 732 aaKnown RBP11.27□□□□□ -0.61
TM9SF4-207ENST00000495749 ZNF530Q6P9A1 599 aaPredicted RBP11.27□□□□□ -0.61
TM9SF4-207ENST00000495749 TNPO1Q92973 898 aaKnown RBP11.27□□□□□ -0.61
TM9SF4-207ENST00000495749 EXOC6BQ9Y2D4 811 aa11.27□□□□□ -0.61
TM9SF4-207ENST00000495749 RGPD8O14715 1765 aaPredicted RBP11.27□□□□□ -0.61
TM9SF4-207ENST00000495749 ARHGAP23Q9P227 1491 aa11.27□□□□□ -0.61
TM9SF4-207ENST00000495749 SSH2Q76I76 1423 aa11.26□□□□□ -0.61
TM9SF4-207ENST00000495749 DIP2AQ14689 1571 aa11.26□□□□□ -0.61
TM9SF4-207ENST00000495749 NLRP2Q9NX02 1062 aa11.26□□□□□ -0.61
TM9SF4-207ENST00000495749 ABCC4O15439 1325 aa11.26□□□□□ -0.61
TM9SF4-207ENST00000495749 PRAMEF22A3QJZ6 481 aa11.26□□□□□ -0.61
TM9SF4-207ENST00000495749 BMP2KLQ5H9B9 411 aa11.26□□□□□ -0.61
TM9SF4-207ENST00000495749 SNX21Q969T3 373 aa11.26□□□□□ -0.61
TM9SF4-207ENST00000495749 CSB-PGBD3P0DP91 1061 aa11.25□□□□□ -0.61
TM9SF4-207ENST00000495749 MRE11P49959 708 aa11.25□□□□□ -0.61
TM9SF4-207ENST00000495749 ARHGAP45Q92619 1136 aa11.25□□□□□ -0.61
TM9SF4-207ENST00000495749 CD2BP2O95400 341 aaKnown RBP11.25□□□□□ -0.61
TM9SF4-207ENST00000495749 DDIT3P35638 169 aa11.25□□□□□ -0.61
TM9SF4-207ENST00000495749 PIP4K2AP48426 406 aaPredicted RBP11.25□□□□□ -0.61
TM9SF4-207ENST00000495749 HDGFL1Q5TGJ6 251 aa11.25□□□□□ -0.61
TM9SF4-207ENST00000495749 TEFQ10587 303 aa11.25□□□□□ -0.61
TM9SF4-207ENST00000495749 FLIIQ13045 1269 aa11.25□□□□□ -0.61
TM9SF4-207ENST00000495749 TAF7Q15545 349 aaPredicted RBP11.25□□□□□ -0.61
TM9SF4-207ENST00000495749 IP6K1Q92551 441 aa11.25□□□□□ -0.61
TM9SF4-207ENST00000495749 RBM42Q9BTD8 480 aaKnown RBP11.25□□□□□ -0.61
TM9SF4-207ENST00000495749 SLIT1O75093 1534 aa11.24□□□□□ -0.61
TM9SF4-207ENST00000495749 MSH6P52701 1360 aa11.24□□□□□ -0.61
TM9SF4-207ENST00000495749 PIK3R4Q99570 1358 aa11.24□□□□□ -0.61
TM9SF4-207ENST00000495749 ATF3P18847 181 aa11.24□□□□□ -0.61
TM9SF4-207ENST00000495749 TBC1D9Q6ZT07 1266 aa11.24□□□□□ -0.61
TM9SF4-207ENST00000495749 ANKRD24Q8TF21 1146 aa11.24□□□□□ -0.61
TM9SF4-207ENST00000495749 KIF2CQ99661 725 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 703.5 ms