RNA–Protein interactions for RNA: ENST00000495705.5

LMO4-204, Transcript of LIM domain only 4, humanhuman

TSL 3

Gene LMO4, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-204ENST00000495705 MARCH10Q8NA82 808 aaPredicted RBP26.95■■□□□ 1.9
LMO4-204ENST00000495705 ZCRB1Q8TBF4 217 aaKnown RBP26.95■■□□□ 1.9
LMO4-204ENST00000495705 BCL9O00512 1426 aa26.95■■□□□ 1.9
LMO4-204ENST00000495705 KDRP35968 1356 aa26.95■■□□□ 1.9
LMO4-204ENST00000495705 CCDC125Q86Z20 511 aa26.94■■□□□ 1.9
LMO4-204ENST00000495705 MYBBP1AQ9BQG0 1328 aaKnown RBP26.93■■□□□ 1.9
LMO4-204ENST00000495705 PRKRIP1Q9H875 184 aaPredicted RBP26.93■■□□□ 1.9
LMO4-204ENST00000495705 SBF2Q86WG5 1849 aa26.92■■□□□ 1.9
LMO4-204ENST00000495705 SULT6B1Q6IMI4 303 aa26.91■■□□□ 1.9
LMO4-204ENST00000495705 PCDH11XQ9BZA7 1347 aa26.9■■□□□ 1.9
LMO4-204ENST00000495705 PCDH11YQ9BZA8 1340 aa26.9■■□□□ 1.9
LMO4-204ENST00000495705 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.9■■□□□ 1.9
LMO4-204ENST00000495705 NUDCQ9Y266 331 aa26.9■■□□□ 1.9
LMO4-204ENST00000495705 AEBP1Q8IUX7 1158 aa26.89■■□□□ 1.9
LMO4-204ENST00000495705 DDX54Q8TDD1 881 aaKnown RBP26.89■■□□□ 1.9
LMO4-204ENST00000495705 SPG7Q9UQ90 795 aa26.89■■□□□ 1.9
LMO4-204ENST00000495705 TNS1Q9HBL0 1735 aaKnown RBP26.88■■□□□ 1.89
LMO4-204ENST00000495705 U2SURPO15042 1029 aaKnown RBP26.87■■□□□ 1.89
LMO4-204ENST00000495705 SF3B2Q13435 895 aaKnown RBP26.87■■□□□ 1.89
LMO4-204ENST00000495705 NHSQ6T4R5 1651 aa26.85■■□□□ 1.89
LMO4-204ENST00000495705 TRIM37O94972 964 aa26.84■■□□□ 1.89
LMO4-204ENST00000495705 HMOX1P09601 288 aa26.84■■□□□ 1.89
LMO4-204ENST00000495705 AMOTQ4VCS5 1084 aa26.84■■□□□ 1.89
LMO4-204ENST00000495705 PLEKHO1Q53GL0 409 aaPredicted RBP26.83■■□□□ 1.89
LMO4-204ENST00000495705 DOT1LQ8TEK3 1739 aa26.82■■□□□ 1.88
LMO4-204ENST00000495705 KAT6BQ8WYB5 2073 aa26.81■■□□□ 1.88
LMO4-204ENST00000495705 CYP27B1O15528 508 aa26.81■■□□□ 1.88
LMO4-204ENST00000495705 ANP32CO43423 234 aa26.8■■□□□ 1.88
LMO4-204ENST00000495705 U2AF1L5P0DN76 240 aaPredicted RBP26.79■■□□□ 1.88
LMO4-204ENST00000495705 U2AF1Q01081 240 aaKnown RBP eCLIP26.79■■□□□ 1.88
LMO4-204ENST00000495705 IFNL2Q8IZJ0 200 aa26.79■■□□□ 1.88
LMO4-204ENST00000495705 BCL11BQ9C0K0 894 aaPredicted RBP26.79■■□□□ 1.88
LMO4-204ENST00000495705 BAG6P46379 1132 aa26.78■■□□□ 1.88
LMO4-204ENST00000495705 PHKG2P15735 406 aa26.76■■□□□ 1.87
LMO4-204ENST00000495705 NKX1-1Q15270 411 aaPredicted RBP26.76■■□□□ 1.87
LMO4-204ENST00000495705 ZNF530Q6P9A1 599 aaPredicted RBP26.76■■□□□ 1.87
LMO4-204ENST00000495705 ACSBG1Q96GR2 724 aa26.75■■□□□ 1.87
LMO4-204ENST00000495705 RSPH6AQ9H0K4 717 aa26.75■■□□□ 1.87
LMO4-204ENST00000495705 RGPD3A6NKT7 1758 aaPredicted RBP26.75■■□□□ 1.87
LMO4-204ENST00000495705 RGPD4Q7Z3J3 1758 aa26.75■■□□□ 1.87
LMO4-204ENST00000495705 TOGARAM1Q9Y4F4 1720 aa26.74■■□□□ 1.87
LMO4-204ENST00000495705 FCHSD2O94868 740 aa26.74■■□□□ 1.87
LMO4-204ENST00000495705 APBA3O96018 575 aa26.74■■□□□ 1.87
LMO4-204ENST00000495705 BTAF1O14981 1849 aa26.74■■□□□ 1.87
LMO4-204ENST00000495705 HSP90AB1P08238 724 aaKnown RBP26.73■■□□□ 1.87
LMO4-204ENST00000495705 C1orf141Q5JVX7 400 aa26.73■■□□□ 1.87
LMO4-204ENST00000495705 KCNQ2O43526 872 aa26.72■■□□□ 1.87
LMO4-204ENST00000495705 PRKAR2BP31323 418 aa26.72■■□□□ 1.87
LMO4-204ENST00000495705 DEFB132Q7Z7B7 95 aa26.71■■□□□ 1.87
LMO4-204ENST00000495705 ITGB4P16144 1822 aa26.7■■□□□ 1.87
LMO4-204ENST00000495705 PTF1AQ7RTS3 328 aa26.7■■□□□ 1.86
LMO4-204ENST00000495705 PRIM1P49642 420 aaKnown RBP26.69■■□□□ 1.86
LMO4-204ENST00000495705 SYTL4Q96C24 671 aaPredicted RBP26.69■■□□□ 1.86
LMO4-204ENST00000495705 MTHFSDQ2M296 383 aaKnown RBP26.68■■□□□ 1.86
LMO4-204ENST00000495705 AKAP4Q5JQC9 854 aa26.68■■□□□ 1.86
LMO4-204ENST00000495705 GAS2L2Q8NHY3 880 aa26.68■■□□□ 1.86
LMO4-204ENST00000495705 DCAF5Q96JK2 942 aa26.68■■□□□ 1.86
LMO4-204ENST00000495705 PNNQ9H307 717 aaKnown RBP26.68■■□□□ 1.86
LMO4-204ENST00000495705 PLSCR1O15162 318 aa26.67■■□□□ 1.86
LMO4-204ENST00000495705 EN1Q05925 392 aaPredicted RBP26.67■■□□□ 1.86
LMO4-204ENST00000495705 SCN11AQ9UI33 1791 aa26.66■■□□□ 1.86
LMO4-204ENST00000495705 NEFMP07197 916 aa26.66■■□□□ 1.86
LMO4-204ENST00000495705 RREB1Q92766 1687 aa26.66■■□□□ 1.86
LMO4-204ENST00000495705 KDM6AO15550 1401 aaPredicted RBP26.65■■□□□ 1.86
LMO4-204ENST00000495705 VIRMAQ69YN4 1812 aaKnown RBP26.65■■□□□ 1.86
LMO4-204ENST00000495705 WDR43Q15061 677 aaKnown RBP eCLIP26.65■■□□□ 1.86
LMO4-204ENST00000495705 CAMKK2Q96RR4 588 aa26.65■■□□□ 1.86
LMO4-204ENST00000495705 PHACTR3Q96KR7 559 aa26.63■■□□□ 1.85
LMO4-204ENST00000495705 ADAMTS7Q9UKP4 1686 aa26.63■■□□□ 1.85
LMO4-204ENST00000495705 ERVV-2B6SEH9 535 aa26.62■■□□□ 1.85
LMO4-204ENST00000495705 EZH2Q15910 746 aaKnown RBP26.62■■□□□ 1.85
LMO4-204ENST00000495705 MAP3K5Q99683 1374 aa26.61■■□□□ 1.85
LMO4-204ENST00000495705 MPRIPQ6WCQ1 1025 aa26.61■■□□□ 1.85
LMO4-204ENST00000495705 TMOD3Q9NYL9 352 aa26.61■■□□□ 1.85
LMO4-204ENST00000495705 PLEKHF1Q96S99 279 aa26.6■■□□□ 1.85
LMO4-204ENST00000495705 MAPK8IP3Q9UPT6 1336 aa26.6■■□□□ 1.85
LMO4-204ENST00000495705 GNAT3A8MTJ3 354 aa26.59■■□□□ 1.85
LMO4-204ENST00000495705 LY75O60449 1722 aa26.59■■□□□ 1.85
LMO4-204ENST00000495705 NUP188Q5SRE5 1749 aa26.59■■□□□ 1.85
LMO4-204ENST00000495705 MRC1P22897 1456 aa26.57■■□□□ 1.84
LMO4-204ENST00000495705 PIGBQ92521 554 aa26.57■■□□□ 1.84
LMO4-204ENST00000495705 MRS2Q9HD23 443 aa26.57■■□□□ 1.84
LMO4-204ENST00000495705 RNMTO43148 476 aaKnown RBP26.56■■□□□ 1.84
LMO4-204ENST00000495705 CABP4P57796 275 aa26.56■■□□□ 1.84
LMO4-204ENST00000495705 DLG5Q8TDM6 1919 aa26.55■■□□□ 1.84
LMO4-204ENST00000495705 CCDC184Q52MB2 194 aa26.55■■□□□ 1.84
LMO4-204ENST00000495705 ADAMTS8Q9UP79 889 aa26.55■■□□□ 1.84
LMO4-204ENST00000495705 TXNRD1Q16881 649 aa26.54■■□□□ 1.84
LMO4-204ENST00000495705 SMARCC1Q92922 1105 aaPredicted RBP26.54■■□□□ 1.84
LMO4-204ENST00000495705 LGR6Q9HBX8 967 aa26.53■■□□□ 1.84
LMO4-204ENST00000495705 PALLDQ8WX93 1383 aa26.53■■□□□ 1.84
LMO4-204ENST00000495705 SLC52A2Q9HAB3 445 aa26.52■■□□□ 1.84
LMO4-204ENST00000495705 HTATSF1O43719 755 aaKnown RBP26.51■■□□□ 1.83
LMO4-204ENST00000495705 NFE2L2Q16236 605 aa26.51■■□□□ 1.83
LMO4-204ENST00000495705 SLC27A3Q5K4L6 730 aa26.51■■□□□ 1.83
LMO4-204ENST00000495705 PROM2Q8N271 834 aa26.51■■□□□ 1.83
LMO4-204ENST00000495705 RTF1Q92541 710 aaKnown RBP26.51■■□□□ 1.83
LMO4-204ENST00000495705 RUNDC1Q96C34 613 aa26.51■■□□□ 1.83
LMO4-204ENST00000495705 NFATC2IPQ8NCF5 419 aa26.5■■□□□ 1.83
LMO4-204ENST00000495705 CEMIPQ8WUJ3 1361 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms