RNA–Protein interactions for RNA: ENST00000495640.1

COPS3-211, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 333 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-211ENST00000495640 DZIP3Q86Y13 1208 aaKnown RBP5.39□□□□□ -1.55
COPS3-211ENST00000495640 C1QTNF2Q9BXJ5 285 aa5.39□□□□□ -1.55
COPS3-211ENST00000495640 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.39□□□□□ -1.55
COPS3-211ENST00000495640 CXXC1Q9P0U4 656 aaPredicted RBP5.39□□□□□ -1.55
COPS3-211ENST00000495640 PRMT3O60678 531 aa5.38□□□□□ -1.55
COPS3-211ENST00000495640 SEC13P55735 322 aa5.38□□□□□ -1.55
COPS3-211ENST00000495640 CCDC102BQ68D86 513 aa5.38□□□□□ -1.55
COPS3-211ENST00000495640 NPAS4Q8IUM7 802 aa5.38□□□□□ -1.55
COPS3-211ENST00000495640 FOXJ1Q92949 421 aa5.38□□□□□ -1.55
COPS3-211ENST00000495640 EMID1Q96A84 441 aaPredicted RBP5.38□□□□□ -1.55
COPS3-211ENST00000495640 CARD14Q9BXL6 1004 aa5.38□□□□□ -1.55
COPS3-211ENST00000495640 EGFL7Q9UHF1 273 aa5.38□□□□□ -1.55
COPS3-211ENST00000495640 MAGEB6P1A0A0J9YX57 407 aa5.37□□□□□ -1.55
COPS3-211ENST00000495640 LOC105371045A0A1W2PR82 267 aa5.37□□□□□ -1.55
COPS3-211ENST00000495640 SFI1A8K8P3 1242 aa5.37□□□□□ -1.55
COPS3-211ENST00000495640 ZNF16P17020 682 aaPredicted RBP5.37□□□□□ -1.55
COPS3-211ENST00000495640 MARSP56192 900 aaKnown RBP5.37□□□□□ -1.55
COPS3-211ENST00000495640 OXLD1Q5BKU9 147 aa5.37□□□□□ -1.55
COPS3-211ENST00000495640 TRIM67Q6ZTA4 783 aa5.37□□□□□ -1.55
COPS3-211ENST00000495640 ZNF511Q8NB15 262 aa5.37□□□□□ -1.55
COPS3-211ENST00000495640 BAP1Q92560 729 aa5.37□□□□□ -1.55
COPS3-211ENST00000495640 WEE1P30291 646 aa5.36□□□□□ -1.55
COPS3-211ENST00000495640 BPHLQ86WA6 291 aaPredicted RBP5.36□□□□□ -1.55
COPS3-211ENST00000495640 TRMT44Q8IYL2 757 aaKnown RBP5.36□□□□□ -1.55
COPS3-211ENST00000495640 CCDC24Q8N4L8 307 aa5.36□□□□□ -1.55
COPS3-211ENST00000495640 TPCN2Q8NHX9 752 aa5.36□□□□□ -1.55
COPS3-211ENST00000495640 SIRT1Q96EB6 747 aa5.36□□□□□ -1.55
COPS3-211ENST00000495640 PRIMPOLQ96LW4 560 aa5.36□□□□□ -1.55
COPS3-211ENST00000495640 SLC6A16Q9GZN6 736 aa5.36□□□□□ -1.55
COPS3-211ENST00000495640 M0R2N6 131 aa5.35□□□□□ -1.55
COPS3-211ENST00000495640 ICMTO60725 284 aa5.35□□□□□ -1.55
COPS3-211ENST00000495640 LINC01559Q495D7 138 aa5.35□□□□□ -1.55
COPS3-211ENST00000495640 RNF20Q5VTR2 975 aa5.35□□□□□ -1.55
COPS3-211ENST00000495640 SEPT12Q8IYM1 358 aa5.35□□□□□ -1.55
COPS3-211ENST00000495640 MRRFQ96E11 262 aaKnown RBP5.35□□□□□ -1.55
COPS3-211ENST00000495640 ANKRD33BA6NCL7 494 aa5.34□□□□□ -1.55
COPS3-211ENST00000495640 ARHGAP4P98171 946 aa5.34□□□□□ -1.55
COPS3-211ENST00000495640 USP4Q13107 963 aa5.34□□□□□ -1.55
COPS3-211ENST00000495640 ZNF211Q13398 564 aaPredicted RBP5.34□□□□□ -1.55
COPS3-211ENST00000495640 FKBP5Q13451 457 aaPredicted RBP5.34□□□□□ -1.55
COPS3-211ENST00000495640 NBPF20Q3BBV1 942 aa5.34□□□□□ -1.55
COPS3-211ENST00000495640 CAPN12Q6ZSI9 719 aa5.34□□□□□ -1.55
COPS3-211ENST00000495640 ZNF775Q96BV0 537 aaPredicted RBP5.34□□□□□ -1.55
COPS3-211ENST00000495640 SLC10A4Q96EP9 437 aa5.34□□□□□ -1.55
COPS3-211ENST00000495640 PURBQ96QR8 312 aaKnown RBP5.34□□□□□ -1.55
COPS3-211ENST00000495640 BCL2L13Q9BXK5 485 aa5.34□□□□□ -1.55
COPS3-211ENST00000495640 SEPT3Q9UH03 358 aa5.34□□□□□ -1.55
COPS3-211ENST00000495640 PDZRN3Q9UPQ7 1066 aa5.34□□□□□ -1.55
COPS3-211ENST00000495640 FCF1Q9Y324 198 aaKnown RBP5.34□□□□□ -1.55
COPS3-211ENST00000495640 H3BRB1 525 aa5.33□□□□□ -1.56
COPS3-211ENST00000495640 C21orf2O43822 256 aa5.33□□□□□ -1.56
COPS3-211ENST00000495640 LGR5O75473 907 aa5.33□□□□□ -1.56
COPS3-211ENST00000495640 SH3BP2P78314 561 aa5.33□□□□□ -1.56
COPS3-211ENST00000495640 ZNF787Q6DD87 383 aa5.33□□□□□ -1.56
COPS3-211ENST00000495640 FBXO33Q7Z6M2 555 aa5.33□□□□□ -1.56
COPS3-211ENST00000495640 TSEN2Q8NCE0 465 aaKnown RBP5.33□□□□□ -1.56
COPS3-211ENST00000495640 TUT1Q9H6E5 874 aaKnown RBP5.33□□□□□ -1.56
COPS3-211ENST00000495640 BIN2Q9UBW5 565 aaPredicted RBP5.33□□□□□ -1.56
COPS3-211ENST00000495640 PCDHB11Q9Y5F2 797 aa5.33□□□□□ -1.56
COPS3-211ENST00000495640 DNMT3AQ9Y6K1 912 aaPredicted RBP5.33□□□□□ -1.56
COPS3-211ENST00000495640 TMEM229AB2RXF0 380 aa5.32□□□□□ -1.56
COPS3-211ENST00000495640 S1PR4O95977 384 aa5.32□□□□□ -1.56
COPS3-211ENST00000495640 ABL1P00519 1130 aa5.32□□□□□ -1.56
COPS3-211ENST00000495640 SCTRP47872 440 aa5.32□□□□□ -1.56
COPS3-211ENST00000495640 CCDC125Q86Z20 511 aa5.32□□□□□ -1.56
COPS3-211ENST00000495640 GIPC2Q8TF65 315 aa5.32□□□□□ -1.56
COPS3-211ENST00000495640 GTF3C2Q8WUA4 911 aaPredicted RBP5.32□□□□□ -1.56
COPS3-211ENST00000495640 ANO2Q9NQ90 1003 aa5.32□□□□□ -1.56
COPS3-211ENST00000495640 CDV3Q9UKY7 258 aaKnown RBP5.32□□□□□ -1.56
COPS3-211ENST00000495640 AGERQ15109 404 aa5.31□□□□□ -1.56
COPS3-211ENST00000495640 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.31□□□□□ -1.56
COPS3-211ENST00000495640 COL26A1Q96A83 441 aa5.31□□□□□ -1.56
COPS3-211ENST00000495640 ASB16Q96NS5 453 aa5.31□□□□□ -1.56
COPS3-211ENST00000495640 ZNF358Q9NW07 568 aa5.31□□□□□ -1.56
COPS3-211ENST00000495640 RNF223E7ERA6 249 aa5.3□□□□□ -1.56
COPS3-211ENST00000495640 WASLO00401 505 aaPredicted RBP5.3□□□□□ -1.56
COPS3-211ENST00000495640 NPR3P17342 541 aa5.3□□□□□ -1.56
COPS3-211ENST00000495640 VAMP1P23763 118 aa5.3□□□□□ -1.56
COPS3-211ENST00000495640 SCNN1DP51172 638 aa5.3□□□□□ -1.56
COPS3-211ENST00000495640 EPHA4P54764 986 aa5.3□□□□□ -1.56
COPS3-211ENST00000495640 ERVK-9P63128 1117 aa5.3□□□□□ -1.56
COPS3-211ENST00000495640 PSME1Q06323 249 aa5.3□□□□□ -1.56
COPS3-211ENST00000495640 SF3B2Q13435 895 aaKnown RBP5.3□□□□□ -1.56
COPS3-211ENST00000495640 MTMR3Q13615 1198 aa5.3□□□□□ -1.56
COPS3-211ENST00000495640 INTS6LQ5JSJ4 861 aaKnown RBP5.3□□□□□ -1.56
COPS3-211ENST00000495640 GLYCTKQ8IVS8 523 aa5.3□□□□□ -1.56
COPS3-211ENST00000495640 KCTD15Q96SI1 283 aaPredicted RBP5.3□□□□□ -1.56
COPS3-211ENST00000495640 HINFPQ9BQA5 517 aa5.3□□□□□ -1.56
COPS3-211ENST00000495640 MKNK1Q9BUB5 465 aa5.3□□□□□ -1.56
COPS3-211ENST00000495640 RBM19Q9Y4C8 960 aaKnown RBP5.3□□□□□ -1.56
COPS3-211ENST00000495640 MAP4K5Q9Y4K4 846 aa5.3□□□□□ -1.56
COPS3-211ENST00000495640 POTECB2RU33 542 aa5.29□□□□□ -1.56
COPS3-211ENST00000495640 ERVH48-1M5A8F1 160 aa5.29□□□□□ -1.56
COPS3-211ENST00000495640 IGFBP4P22692 258 aa5.29□□□□□ -1.56
COPS3-211ENST00000495640 MYT1Q01538 1121 aa5.29□□□□□ -1.56
COPS3-211ENST00000495640 TAGLNQ01995 201 aaKnown RBP5.29□□□□□ -1.56
COPS3-211ENST00000495640 FKBP4Q02790 459 aaKnown RBP eCLIP5.29□□□□□ -1.56
COPS3-211ENST00000495640 GAS2L2Q8NHY3 880 aa5.29□□□□□ -1.56
COPS3-211ENST00000495640 HELQQ8TDG4 1101 aa5.29□□□□□ -1.56
COPS3-211ENST00000495640 DCTN4Q9UJW0 460 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms