RNA–Protein interactions for RNA: ENST00000495553.1

ACTN4-207, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-207ENST00000495553 ZCRB1Q8TBF4 217 aaKnown RBP12.58□□□□□ -0.4
ACTN4-207ENST00000495553 DDX54Q8TDD1 881 aaKnown RBP12.58□□□□□ -0.4
ACTN4-207ENST00000495553 RGPD5Q99666 1765 aa12.57□□□□□ -0.4
ACTN4-207ENST00000495553 IL13P35225 146 aa12.57□□□□□ -0.4
ACTN4-207ENST00000495553 CCDC184Q52MB2 194 aa12.57□□□□□ -0.4
ACTN4-207ENST00000495553 MARCH10Q8NA82 808 aaPredicted RBP12.57□□□□□ -0.4
ACTN4-207ENST00000495553 TNS2Q63HR2 1409 aa12.56□□□□□ -0.4
ACTN4-207ENST00000495553 IGSF1Q8N6C5 1336 aa12.56□□□□□ -0.4
ACTN4-207ENST00000495553 OVOS2A0A0G2JMS6 1433 aa12.55□□□□□ -0.4
ACTN4-207ENST00000495553 TRIM37O94972 964 aa12.55□□□□□ -0.4
ACTN4-207ENST00000495553 SULT6B1Q6IMI4 303 aa12.55□□□□□ -0.4
ACTN4-207ENST00000495553 SPG7Q9UQ90 795 aa12.55□□□□□ -0.4
ACTN4-207ENST00000495553 MAPK8IP3Q9UPT6 1336 aa12.55□□□□□ -0.4
ACTN4-207ENST00000495553 COL3A1P02461 1466 aaPredicted RBP12.54□□□□□ -0.4
ACTN4-207ENST00000495553 MEGF6O75095 1541 aa12.54□□□□□ -0.4
ACTN4-207ENST00000495553 FCHSD2O94868 740 aa12.54□□□□□ -0.4
ACTN4-207ENST00000495553 ADAMTS8Q9UP79 889 aa12.54□□□□□ -0.4
ACTN4-207ENST00000495553 FAM208AQ9UK61 1670 aaKnown RBP12.54□□□□□ -0.4
ACTN4-207ENST00000495553 AEBP1Q8IUX7 1158 aa12.53□□□□□ -0.4
ACTN4-207ENST00000495553 HMOX1P09601 288 aa12.52□□□□□ -0.41
ACTN4-207ENST00000495553 BAG6P46379 1132 aa12.52□□□□□ -0.41
ACTN4-207ENST00000495553 PLEKHO1Q53GL0 409 aaPredicted RBP12.52□□□□□ -0.41
ACTN4-207ENST00000495553 NGEFQ8N5V2 710 aa12.52□□□□□ -0.41
ACTN4-207ENST00000495553 RUNDC1Q96C34 613 aa12.52□□□□□ -0.41
ACTN4-207ENST00000495553 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.52□□□□□ -0.41
ACTN4-207ENST00000495553 PCDH11XQ9BZA7 1347 aa12.52□□□□□ -0.41
ACTN4-207ENST00000495553 PCDH11YQ9BZA8 1340 aa12.52□□□□□ -0.41
ACTN4-207ENST00000495553 NCAPD2Q15021 1401 aa12.52□□□□□ -0.41
ACTN4-207ENST00000495553 PARP4Q9UKK3 1724 aaKnown RBP12.51□□□□□ -0.41
ACTN4-207ENST00000495553 APBA3O96018 575 aa12.51□□□□□ -0.41
ACTN4-207ENST00000495553 AMOTQ4VCS5 1084 aa12.51□□□□□ -0.41
ACTN4-207ENST00000495553 LRRC37A3O60309 1634 aa12.51□□□□□ -0.41
ACTN4-207ENST00000495553 BRWD3Q6RI45 1802 aa12.51□□□□□ -0.41
ACTN4-207ENST00000495553 ACSBG1Q96GR2 724 aa12.5□□□□□ -0.41
ACTN4-207ENST00000495553 BCL11BQ9C0K0 894 aaPredicted RBP12.5□□□□□ -0.41
ACTN4-207ENST00000495553 BCL9O00512 1426 aa12.5□□□□□ -0.41
ACTN4-207ENST00000495553 KDRP35968 1356 aa12.49□□□□□ -0.41
ACTN4-207ENST00000495553 CYP27B1O15528 508 aa12.49□□□□□ -0.41
ACTN4-207ENST00000495553 PRKAR2BP31323 418 aa12.49□□□□□ -0.41
ACTN4-207ENST00000495553 HNRNPUQ00839 825 aaKnown RBP eCLIP12.49□□□□□ -0.412e-6■■■□□ 15.5
ACTN4-207ENST00000495553 DEFB132Q7Z7B7 95 aa12.49□□□□□ -0.41
ACTN4-207ENST00000495553 IFNL2Q8IZJ0 200 aa12.49□□□□□ -0.41
ACTN4-207ENST00000495553 SYTL4Q96C24 671 aaPredicted RBP12.49□□□□□ -0.41
ACTN4-207ENST00000495553 YTHDC1Q96MU7 727 aaKnown RBP12.49□□□□□ -0.41
ACTN4-207ENST00000495553 PLEKHG2Q9H7P9 1386 aa12.48□□□□□ -0.41
ACTN4-207ENST00000495553 C1orf141Q5JVX7 400 aa12.48□□□□□ -0.41
ACTN4-207ENST00000495553 ZNF530Q6P9A1 599 aaPredicted RBP12.48□□□□□ -0.41
ACTN4-207ENST00000495553 CCDC146Q8IYE0 955 aa12.48□□□□□ -0.41
ACTN4-207ENST00000495553 RSPH6AQ9H0K4 717 aa12.48□□□□□ -0.41
ACTN4-207ENST00000495553 KCNQ2O43526 872 aa12.47□□□□□ -0.41
ACTN4-207ENST00000495553 PHKG2P15735 406 aa12.47□□□□□ -0.41
ACTN4-207ENST00000495553 PRIM1P49642 420 aaKnown RBP12.47□□□□□ -0.41
ACTN4-207ENST00000495553 EN1Q05925 392 aaPredicted RBP12.47□□□□□ -0.41
ACTN4-207ENST00000495553 RGPD2P0DJD1 1756 aa12.46□□□□□ -0.41
ACTN4-207ENST00000495553 HSP90AB1P08238 724 aaKnown RBP12.46□□□□□ -0.41
ACTN4-207ENST00000495553 LMOD3Q0VAK6 560 aa12.46□□□□□ -0.41
ACTN4-207ENST00000495553 PTF1AQ7RTS3 328 aa12.46□□□□□ -0.41
ACTN4-207ENST00000495553 GAS2L2Q8NHY3 880 aa12.46□□□□□ -0.41
ACTN4-207ENST00000495553 WNK3Q9BYP7 1800 aa12.46□□□□□ -0.42
ACTN4-207ENST00000495553 RGPD1P0DJD0 1748 aa12.45□□□□□ -0.42
ACTN4-207ENST00000495553 NKX1-1Q15270 411 aaPredicted RBP12.45□□□□□ -0.42
ACTN4-207ENST00000495553 APAF1O14727 1248 aa12.44□□□□□ -0.42
ACTN4-207ENST00000495553 EZH2Q15910 746 aaKnown RBP12.44□□□□□ -0.42
ACTN4-207ENST00000495553 NCBP3Q53F19 620 aaKnown RBP12.44□□□□□ -0.42
ACTN4-207ENST00000495553 PLEKHF1Q96S99 279 aa12.44□□□□□ -0.42
ACTN4-207ENST00000495553 PLSCR1O15162 318 aa12.43□□□□□ -0.42
ACTN4-207ENST00000495553 CALD1Q05682 793 aaKnown RBP12.43□□□□□ -0.42
ACTN4-207ENST00000495553 NFE2L2Q16236 605 aa12.43□□□□□ -0.42
ACTN4-207ENST00000495553 MTHFSDQ2M296 383 aaKnown RBP12.43□□□□□ -0.42
ACTN4-207ENST00000495553 AKAP4Q5JQC9 854 aa12.43□□□□□ -0.42
ACTN4-207ENST00000495553 MPRIPQ6WCQ1 1025 aa12.43□□□□□ -0.42
ACTN4-207ENST00000495553 RTF1Q92541 710 aaKnown RBP12.43□□□□□ -0.42
ACTN4-207ENST00000495553 DCAF5Q96JK2 942 aa12.43□□□□□ -0.42
ACTN4-207ENST00000495553 CAMKK2Q96RR4 588 aa12.43□□□□□ -0.42
ACTN4-207ENST00000495553 TMPOP42166 694 aaKnown RBP12.42□□□□□ -0.42
ACTN4-207ENST00000495553 RIPK4P57078 832 aa12.42□□□□□ -0.42
ACTN4-207ENST00000495553 NEUROD2Q15784 382 aa12.42□□□□□ -0.42
ACTN4-207ENST00000495553 TMOD3Q9NYL9 352 aa12.42□□□□□ -0.42
ACTN4-207ENST00000495553 ZBED9Q6R2W3 1325 aa12.41□□□□□ -0.42
ACTN4-207ENST00000495553 ERVV-2B6SEH9 535 aa12.4□□□□□ -0.42
ACTN4-207ENST00000495553 CABP4P57796 275 aa12.4□□□□□ -0.42
ACTN4-207ENST00000495553 CCDC27Q2M243 656 aa12.4□□□□□ -0.42
ACTN4-207ENST00000495553 PHACTR3Q96KR7 559 aa12.4□□□□□ -0.42
ACTN4-207ENST00000495553 SALL2Q9Y467 1007 aaPredicted RBP12.4□□□□□ -0.42
ACTN4-207ENST00000495553 GNAT3A8MTJ3 354 aa12.39□□□□□ -0.43
ACTN4-207ENST00000495553 HTATSF1O43719 755 aaKnown RBP12.39□□□□□ -0.43
ACTN4-207ENST00000495553 CENPBP07199 599 aaPredicted RBP12.39□□□□□ -0.43
ACTN4-207ENST00000495553 TXNRD1Q16881 649 aa12.39□□□□□ -0.43
ACTN4-207ENST00000495553 PIGBQ92521 554 aa12.39□□□□□ -0.43
ACTN4-207ENST00000495553 SMARCC1Q92922 1105 aaPredicted RBP12.39□□□□□ -0.43
ACTN4-207ENST00000495553 RRP7AQ9Y3A4 280 aaKnown RBP12.39□□□□□ -0.43
ACTN4-207ENST00000495553 PKD1L3Q7Z443 1732 aa12.38□□□□□ -0.43
ACTN4-207ENST00000495553 NBPF14Q5TI25 921 aa12.38□□□□□ -0.43
ACTN4-207ENST00000495553 RNMTO43148 476 aaKnown RBP12.37□□□□□ -0.43
ACTN4-207ENST00000495553 WDR63Q8IWG1 891 aa12.37□□□□□ -0.43
ACTN4-207ENST00000495553 PROM2Q8N271 834 aa12.37□□□□□ -0.43
ACTN4-207ENST00000495553 LGR6Q9HBX8 967 aa12.37□□□□□ -0.43
ACTN4-207ENST00000495553 MAP3K5Q99683 1374 aa12.37□□□□□ -0.43
ACTN4-207ENST00000495553 GOLGA2Q08379 1002 aa12.36□□□□□ -0.43
ACTN4-207ENST00000495553 SLC27A3Q5K4L6 730 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms