RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 FAM196AQ6ZSG2 479 aa18.35■□□□□ 0.53
FDPS-219ENST00000495308 NHSQ6T4R5 1651 aa18.34■□□□□ 0.53
FDPS-219ENST00000495308 AEBP1Q8IUX7 1158 aa18.33■□□□□ 0.52
FDPS-219ENST00000495308 DDX54Q8TDD1 881 aaKnown RBP18.33■□□□□ 0.52
FDPS-219ENST00000495308 DIAPH1O60610 1272 aaKnown RBP18.32■□□□□ 0.52
FDPS-219ENST00000495308 TRIM37O94972 964 aa18.32■□□□□ 0.52
FDPS-219ENST00000495308 ZCRB1Q8TBF4 217 aaKnown RBP18.32■□□□□ 0.52
FDPS-219ENST00000495308 TOGARAM1Q9Y4F4 1720 aa18.3■□□□□ 0.52
FDPS-219ENST00000495308 SULT6B1Q6IMI4 303 aa18.3■□□□□ 0.52
FDPS-219ENST00000495308 CCDC125Q86Z20 511 aa18.3■□□□□ 0.52
FDPS-219ENST00000495308 BCL9O00512 1426 aa18.3■□□□□ 0.52
FDPS-219ENST00000495308 BTAF1O14981 1849 aa18.29■□□□□ 0.52
FDPS-219ENST00000495308 SF3B2Q13435 895 aaKnown RBP18.29■□□□□ 0.52
FDPS-219ENST00000495308 CFAP53Q96M91 514 aa18.29■□□□□ 0.52
FDPS-219ENST00000495308 KDRP35968 1356 aa18.29■□□□□ 0.52
FDPS-219ENST00000495308 VIRMAQ69YN4 1812 aaKnown RBP18.28■□□□□ 0.52
FDPS-219ENST00000495308 U2SURPO15042 1029 aaKnown RBP18.28■□□□□ 0.52
FDPS-219ENST00000495308 HMOX1P09601 288 aa18.28■□□□□ 0.52
FDPS-219ENST00000495308 RALBP1Q15311 655 aa18.28■□□□□ 0.52
FDPS-219ENST00000495308 DEFB132Q7Z7B7 95 aa18.28■□□□□ 0.52
FDPS-219ENST00000495308 ACSBG1Q96GR2 724 aa18.28■□□□□ 0.52
FDPS-219ENST00000495308 ITGB4P16144 1822 aa18.28■□□□□ 0.52
FDPS-219ENST00000495308 PCDH11XQ9BZA7 1347 aa18.27■□□□□ 0.52
FDPS-219ENST00000495308 PCDH11YQ9BZA8 1340 aa18.27■□□□□ 0.52
FDPS-219ENST00000495308 PTF1AQ7RTS3 328 aa18.27■□□□□ 0.52
FDPS-219ENST00000495308 CYP27B1O15528 508 aa18.26■□□□□ 0.51
FDPS-219ENST00000495308 SPG7Q9UQ90 795 aa18.25■□□□□ 0.51
FDPS-219ENST00000495308 RREB1Q92766 1687 aa18.25■□□□□ 0.51
FDPS-219ENST00000495308 RGPD3A6NKT7 1758 aaPredicted RBP18.25■□□□□ 0.51
FDPS-219ENST00000495308 RGPD4Q7Z3J3 1758 aa18.25■□□□□ 0.51
FDPS-219ENST00000495308 MYBBP1AQ9BQG0 1328 aaKnown RBP18.24■□□□□ 0.51
FDPS-219ENST00000495308 KCNQ2O43526 872 aa18.24■□□□□ 0.51
FDPS-219ENST00000495308 APBA3O96018 575 aa18.24■□□□□ 0.51
FDPS-219ENST00000495308 BAG6P46379 1132 aa18.24■□□□□ 0.51
FDPS-219ENST00000495308 PRKRIP1Q9H875 184 aaPredicted RBP18.24■□□□□ 0.51
FDPS-219ENST00000495308 PLEKHG2Q9H7P9 1386 aa18.23■□□□□ 0.51
FDPS-219ENST00000495308 EN1Q05925 392 aaPredicted RBP18.23■□□□□ 0.51
FDPS-219ENST00000495308 BCL11BQ9C0K0 894 aaPredicted RBP18.22■□□□□ 0.51
FDPS-219ENST00000495308 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.22■□□□□ 0.516e-9■□□□□ 10.6
FDPS-219ENST00000495308 NUP188Q5SRE5 1749 aa18.22■□□□□ 0.51
FDPS-219ENST00000495308 PLEKHO1Q53GL0 409 aaPredicted RBP18.21■□□□□ 0.51
FDPS-219ENST00000495308 SCN11AQ9UI33 1791 aa18.2■□□□□ 0.5
FDPS-219ENST00000495308 PHKG2P15735 406 aa18.2■□□□□ 0.5
FDPS-219ENST00000495308 ZNF530Q6P9A1 599 aaPredicted RBP18.2■□□□□ 0.5
FDPS-219ENST00000495308 SYTL4Q96C24 671 aaPredicted RBP18.2■□□□□ 0.5
FDPS-219ENST00000495308 NUDCQ9Y266 331 aa18.2■□□□□ 0.5
FDPS-219ENST00000495308 U2AF1L5P0DN76 240 aaPredicted RBP18.19■□□□□ 0.5
FDPS-219ENST00000495308 U2AF1Q01081 240 aaKnown RBP eCLIP18.19■□□□□ 0.5
FDPS-219ENST00000495308 EZH2Q15910 746 aaKnown RBP18.19■□□□□ 0.5
FDPS-219ENST00000495308 IFNL2Q8IZJ0 200 aa18.19■□□□□ 0.5
FDPS-219ENST00000495308 PRIM1P49642 420 aaKnown RBP18.18■□□□□ 0.5
FDPS-219ENST00000495308 AMOTQ4VCS5 1084 aa18.18■□□□□ 0.5
FDPS-219ENST00000495308 NKX1-1Q15270 411 aaPredicted RBP18.17■□□□□ 0.5
FDPS-219ENST00000495308 CAMKK2Q96RR4 588 aa18.17■□□□□ 0.5
FDPS-219ENST00000495308 RSPH6AQ9H0K4 717 aa18.17■□□□□ 0.5
FDPS-219ENST00000495308 LY75O60449 1722 aa18.17■□□□□ 0.5
FDPS-219ENST00000495308 PRKAR2BP31323 418 aa18.16■□□□□ 0.5
FDPS-219ENST00000495308 DLG5Q8TDM6 1919 aa18.15■□□□□ 0.5
FDPS-219ENST00000495308 KDM6AO15550 1401 aaPredicted RBP18.15■□□□□ 0.5
FDPS-219ENST00000495308 MTHFSDQ2M296 383 aaKnown RBP18.15■□□□□ 0.5
FDPS-219ENST00000495308 C1orf141Q5JVX7 400 aa18.15■□□□□ 0.5
FDPS-219ENST00000495308 PLSCR1O15162 318 aa18.14■□□□□ 0.49
FDPS-219ENST00000495308 ADAMTS7Q9UKP4 1686 aa18.14■□□□□ 0.49
FDPS-219ENST00000495308 ANP32CO43423 234 aa18.13■□□□□ 0.49
FDPS-219ENST00000495308 MPRIPQ6WCQ1 1025 aa18.13■□□□□ 0.49
FDPS-219ENST00000495308 PHACTR3Q96KR7 559 aa18.13■□□□□ 0.49
FDPS-219ENST00000495308 FCHSD2O94868 740 aa18.11■□□□□ 0.49
FDPS-219ENST00000495308 HSP90AB1P08238 724 aaKnown RBP18.11■□□□□ 0.49
FDPS-219ENST00000495308 AKAP4Q5JQC9 854 aa18.11■□□□□ 0.49
FDPS-219ENST00000495308 DCAF5Q96JK2 942 aa18.11■□□□□ 0.49
FDPS-219ENST00000495308 PROM2Q8N271 834 aa18.1■□□□□ 0.49
FDPS-219ENST00000495308 SIPA1L3O60292 1781 aaPredicted RBP18.09■□□□□ 0.49
FDPS-219ENST00000495308 PIGBQ92521 554 aa18.09■□□□□ 0.49
FDPS-219ENST00000495308 TMOD3Q9NYL9 352 aa18.09■□□□□ 0.49
FDPS-219ENST00000495308 TAF1LQ8IZX4 1826 aa18.09■□□□□ 0.49
FDPS-219ENST00000495308 PAPPAQ13219 1627 aa18.09■□□□□ 0.49
FDPS-219ENST00000495308 MAP3K5Q99683 1374 aa18.08■□□□□ 0.49
FDPS-219ENST00000495308 TXNRD1Q16881 649 aa18.08■□□□□ 0.48
FDPS-219ENST00000495308 CCDC184Q52MB2 194 aa18.08■□□□□ 0.48
FDPS-219ENST00000495308 GAS2L2Q8NHY3 880 aa18.08■□□□□ 0.48
FDPS-219ENST00000495308 LGR6Q9HBX8 967 aa18.08■□□□□ 0.48
FDPS-219ENST00000495308 C5P01031 1676 aa18.07■□□□□ 0.48
FDPS-219ENST00000495308 ERVV-2B6SEH9 535 aa18.07■□□□□ 0.48
FDPS-219ENST00000495308 MRC1P22897 1456 aa18.07■□□□□ 0.48
FDPS-219ENST00000495308 WDR43Q15061 677 aaKnown RBP eCLIP18.06■□□□□ 0.483e-7■■■■□ 25.4
FDPS-219ENST00000495308 PLEKHF1Q96S99 279 aa18.06■□□□□ 0.48
FDPS-219ENST00000495308 TUBGCP6Q96RT7 1819 aa18.06■□□□□ 0.48
FDPS-219ENST00000495308 PALLDQ8WX93 1383 aa18.05■□□□□ 0.48
FDPS-219ENST00000495308 GNAT3A8MTJ3 354 aa18.05■□□□□ 0.48
FDPS-219ENST00000495308 RNMTO43148 476 aaKnown RBP18.05■□□□□ 0.48
FDPS-219ENST00000495308 KCNQ4P56696 695 aa18.05■□□□□ 0.48
FDPS-219ENST00000495308 CABP4P57796 275 aa18.05■□□□□ 0.48
FDPS-219ENST00000495308 NFATC2IPQ8NCF5 419 aa18.04■□□□□ 0.48
FDPS-219ENST00000495308 LRRC4BQ9NT99 713 aa18.04■□□□□ 0.48
FDPS-219ENST00000495308 ASAP1Q9ULH1 1129 aa18.04■□□□□ 0.48
FDPS-219ENST00000495308 SRCAPQ6ZRS2 3230 aa18.04■□□□□ 0.48
FDPS-219ENST00000495308 MAPK8IP3Q9UPT6 1336 aa18.03■□□□□ 0.48
FDPS-219ENST00000495308 PSDA5PKW4 1024 aaPredicted RBP18.03■□□□□ 0.48
FDPS-219ENST00000495308 NEFMP07197 916 aa18.03■□□□□ 0.48
FDPS-219ENST00000495308 CCDC146Q8IYE0 955 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms