RNA–Protein interactions for RNA: ENST00000495298.1

GTF3C2-213, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 2

Gene GTF3C2, Length 1,064 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-213ENST00000495298 PELP1Q8IZL8 1130 aaKnown RBP13.43□□□□□ -0.26
GTF3C2-213ENST00000495298 IP6K1Q92551 441 aa13.43□□□□□ -0.26
GTF3C2-213ENST00000495298 YBX3P16989 372 aaKnown RBP eCLIP13.42□□□□□ -0.26
GTF3C2-213ENST00000495298 SLC27A3Q5K4L6 730 aa13.42□□□□□ -0.26
GTF3C2-213ENST00000495298 HDGFL2Q7Z4V5 671 aaPredicted RBP13.42□□□□□ -0.26
GTF3C2-213ENST00000495298 SYTL4Q96C24 671 aaPredicted RBP13.42□□□□□ -0.26
GTF3C2-213ENST00000495298 TFCP2L1Q9NZI6 479 aa13.42□□□□□ -0.26
GTF3C2-213ENST00000495298 ANKRD36BQ8N2N9 1353 aa13.42□□□□□ -0.26
GTF3C2-213ENST00000495298 MAP3K19Q56UN5 1328 aa13.41□□□□□ -0.26
GTF3C2-213ENST00000495298 SLC16A10Q8TF71 515 aa13.41□□□□□ -0.26
GTF3C2-213ENST00000495298 CARD11Q9BXL7 1154 aa13.41□□□□□ -0.26
GTF3C2-213ENST00000495298 POLD1P28340 1107 aa13.4□□□□□ -0.26
GTF3C2-213ENST00000495298 HOXC9P31274 260 aa13.4□□□□□ -0.26
GTF3C2-213ENST00000495298 GIGYF1O75420 1035 aaPredicted RBP13.39□□□□□ -0.27
GTF3C2-213ENST00000495298 MSL1Q68DK7 614 aa13.39□□□□□ -0.27
GTF3C2-213ENST00000495298 COL23A1Q86Y22 540 aaPredicted RBP13.39□□□□□ -0.27
GTF3C2-213ENST00000495298 C5P01031 1676 aa13.39□□□□□ -0.27
GTF3C2-213ENST00000495298 USHBP1Q8N6Y0 703 aa13.38□□□□□ -0.27
GTF3C2-213ENST00000495298 CCNL1Q9UK58 526 aaPredicted RBP13.38□□□□□ -0.27
GTF3C2-213ENST00000495298 TAF1LQ8IZX4 1826 aa13.38□□□□□ -0.27
GTF3C2-213ENST00000495298 TOGARAM1Q9Y4F4 1720 aa13.37□□□□□ -0.27
GTF3C2-213ENST00000495298 PIAS4Q8N2W9 510 aaPredicted RBP13.37□□□□□ -0.27
GTF3C2-213ENST00000495298 TERF2IPQ9NYB0 399 aa13.37□□□□□ -0.27
GTF3C2-213ENST00000495298 RRS1Q15050 365 aaKnown RBP13.36□□□□□ -0.27
GTF3C2-213ENST00000495298 NBPF6Q5VWK0 638 aa13.36□□□□□ -0.27
GTF3C2-213ENST00000495298 AMIGO3Q86WK7 504 aa13.36□□□□□ -0.27
GTF3C2-213ENST00000495298 ZCRB1Q8TBF4 217 aaKnown RBP13.36□□□□□ -0.27
GTF3C2-213ENST00000495298 NBPF4Q96M43 638 aa13.36□□□□□ -0.27
GTF3C2-213ENST00000495298 TESK2Q96S53 571 aa13.36□□□□□ -0.27
GTF3C2-213ENST00000495298 ATP10DQ9P241 1426 aa13.34□□□□□ -0.27
GTF3C2-213ENST00000495298 AMPHP49418 695 aa13.34□□□□□ -0.27
GTF3C2-213ENST00000495298 SMIM5Q71RC9 77 aa13.34□□□□□ -0.27
GTF3C2-213ENST00000495298 COG3Q96JB2 828 aa13.34□□□□□ -0.27
GTF3C2-213ENST00000495298 ITGB4P16144 1822 aa13.34□□□□□ -0.27
GTF3C2-213ENST00000495298 USP47Q96K76 1375 aa13.33□□□□□ -0.27
GTF3C2-213ENST00000495298 UBR3Q6ZT12 1888 aa13.32□□□□□ -0.28
GTF3C2-213ENST00000495298 ST20-MTHFSA0A0A6YYL1 179 aa13.32□□□□□ -0.28
GTF3C2-213ENST00000495298 PUS7Q96PZ0 661 aaKnown RBP13.32□□□□□ -0.28
GTF3C2-213ENST00000495298 GGNBP2Q9H3C7 697 aa13.32□□□□□ -0.28
GTF3C2-213ENST00000495298 C4BP0C0L5 1744 aa13.32□□□□□ -0.28
GTF3C2-213ENST00000495298 RTL1A6NKG5 1358 aa13.32□□□□□ -0.28
GTF3C2-213ENST00000495298 WWC3Q9ULE0 1092 aa13.31□□□□□ -0.28
GTF3C2-213ENST00000495298 ADCY9O60503 1353 aa13.31□□□□□ -0.28
GTF3C2-213ENST00000495298 PALLDQ8WX93 1383 aa13.31□□□□□ -0.28
GTF3C2-213ENST00000495298 MAP2P11137 1827 aaKnown RBP13.3□□□□□ -0.28
GTF3C2-213ENST00000495298 KIF20BQ96Q89 1820 aa13.3□□□□□ -0.28
GTF3C2-213ENST00000495298 FYB1O15117 783 aa13.3□□□□□ -0.28
GTF3C2-213ENST00000495298 GRIN3BO60391 1043 aa13.3□□□□□ -0.28
GTF3C2-213ENST00000495298 HSP90AB2PQ58FF8 381 aa13.3□□□□□ -0.28
GTF3C2-213ENST00000495298 CYP27B1O15528 508 aa13.29□□□□□ -0.28
GTF3C2-213ENST00000495298 IFFO2Q5TF58 517 aa13.29□□□□□ -0.28
GTF3C2-213ENST00000495298 ZNF526Q8TF50 670 aaPredicted RBP13.29□□□□□ -0.28
GTF3C2-213ENST00000495298 PKD1L3Q7Z443 1732 aa13.29□□□□□ -0.28
GTF3C2-213ENST00000495298 TONSLQ96HA7 1378 aa13.29□□□□□ -0.28
GTF3C2-213ENST00000495298 MPRIPQ6WCQ1 1025 aa13.28□□□□□ -0.28
GTF3C2-213ENST00000495298 RAPGEF4Q8WZA2 1011 aa13.27□□□□□ -0.29
GTF3C2-213ENST00000495298 CD2APQ9Y5K6 639 aa13.27□□□□□ -0.29
GTF3C2-213ENST00000495298 PCDH11XQ9BZA7 1347 aa13.27□□□□□ -0.29
GTF3C2-213ENST00000495298 PCDH11YQ9BZA8 1340 aa13.27□□□□□ -0.29
GTF3C2-213ENST00000495298 PHF14O94880 888 aa13.26□□□□□ -0.29
GTF3C2-213ENST00000495298 INSRP06213 1382 aa13.26□□□□□ -0.29
GTF3C2-213ENST00000495298 TATP17735 454 aaPredicted RBP13.26□□□□□ -0.29
GTF3C2-213ENST00000495298 CGNL1Q0VF96 1302 aa13.26□□□□□ -0.29
GTF3C2-213ENST00000495298 SMG6Q86US8 1419 aaKnown RBP13.26□□□□□ -0.29
GTF3C2-213ENST00000495298 KIAA1551Q9HCM1 1747 aa13.25□□□□□ -0.29
GTF3C2-213ENST00000495298 IGSF1Q8N6C5 1336 aa13.25□□□□□ -0.29
GTF3C2-213ENST00000495298 GPBP1L1Q9HC44 474 aaPredicted RBP13.25□□□□□ -0.29
GTF3C2-213ENST00000495298 NCAPD2Q15021 1401 aa13.24□□□□□ -0.29
GTF3C2-213ENST00000495298 FLT4P35916 1363 aa13.24□□□□□ -0.29
GTF3C2-213ENST00000495298 LINC00116Q8NCU8 138 aa13.24□□□□□ -0.29
GTF3C2-213ENST00000495298 PIGBQ92521 554 aa13.24□□□□□ -0.29
GTF3C2-213ENST00000495298 EMILIN1Q9Y6C2 1016 aa13.24□□□□□ -0.29
GTF3C2-213ENST00000495298 ANKRD26Q9UPS8 1709 aa13.24□□□□□ -0.29
GTF3C2-213ENST00000495298 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.23□□□□□ -0.29
GTF3C2-213ENST00000495298 AK7Q96M32 723 aa13.23□□□□□ -0.29
GTF3C2-213ENST00000495298 CICQ96RK0 1608 aaPredicted RBP13.22□□□□□ -0.29
GTF3C2-213ENST00000495298 CARD14Q9BXL6 1004 aa13.22□□□□□ -0.29
GTF3C2-213ENST00000495298 N4BP2Q86UW6 1770 aaPredicted RBP13.22□□□□□ -0.29
GTF3C2-213ENST00000495298 KIF13BQ9NQT8 1826 aa13.21□□□□□ -0.29
GTF3C2-213ENST00000495298 HSPA6P17066 643 aa13.21□□□□□ -0.29
GTF3C2-213ENST00000495298 ITPK1Q13572 414 aa13.21□□□□□ -0.29
GTF3C2-213ENST00000495298 FLAD1Q8NFF5 587 aa13.21□□□□□ -0.29
GTF3C2-213ENST00000495298 LOC102724428A0A0B4J2F2 783 aa13.2□□□□□ -0.3
GTF3C2-213ENST00000495298 KIF3CO14782 793 aa13.2□□□□□ -0.3
GTF3C2-213ENST00000495298 ADRA2BP18089 450 aa13.2□□□□□ -0.3
GTF3C2-213ENST00000495298 SIK1P57059 783 aa13.2□□□□□ -0.3
GTF3C2-213ENST00000495298 ASAP1Q9ULH1 1129 aa13.2□□□□□ -0.3
GTF3C2-213ENST00000495298 NSD3Q9BZ95 1437 aa13.2□□□□□ -0.3
GTF3C2-213ENST00000495298 PXDNLA1KZ92 1463 aa13.19□□□□□ -0.3
GTF3C2-213ENST00000495298 NKX1-1Q15270 411 aaPredicted RBP13.19□□□□□ -0.3
GTF3C2-213ENST00000495298 SMARCC1Q92922 1105 aaPredicted RBP13.19□□□□□ -0.3
GTF3C2-213ENST00000495298 KIF24Q5T7B8 1368 aa13.19□□□□□ -0.3
GTF3C2-213ENST00000495298 SSFA2P28290 1259 aa13.18□□□□□ -0.3
GTF3C2-213ENST00000495298 TMF1P82094 1093 aa13.18□□□□□ -0.3
GTF3C2-213ENST00000495298 BRCA1P38398 1863 aaKnown RBP13.17□□□□□ -0.3
GTF3C2-213ENST00000495298 GNPATO15228 680 aa13.17□□□□□ -0.3
GTF3C2-213ENST00000495298 EYA1Q99502 592 aa13.17□□□□□ -0.3
GTF3C2-213ENST00000495298 KDRP35968 1356 aa13.17□□□□□ -0.3
GTF3C2-213ENST00000495298 PPM1GO15355 546 aaPredicted RBP13.16□□□□□ -0.3
GTF3C2-213ENST00000495298 MMP10P09238 476 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms