RNA–Protein interactions for RNA: ENST00000495099.2

HDAC11-219, Transcript of histone deacetylase 11, humanhuman

TSL 5

Gene HDAC11, Length 198 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-219ENST00000495099 AXIN2Q9Y2T1 843 aa17.17■□□□□ 0.34
HDAC11-219ENST00000495099 SLIT3O75094 1523 aa17.16■□□□□ 0.34
HDAC11-219ENST00000495099 COL23A1Q86Y22 540 aaPredicted RBP17.16■□□□□ 0.34
HDAC11-219ENST00000495099 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.16■□□□□ 0.34
HDAC11-219ENST00000495099 CSB-PGBD3P0DP91 1061 aa17.15■□□□□ 0.34
HDAC11-219ENST00000495099 KTN1Q86UP2 1357 aaKnown RBP17.15■□□□□ 0.34
HDAC11-219ENST00000495099 CICQ96RK0 1608 aaPredicted RBP17.14■□□□□ 0.33
HDAC11-219ENST00000495099 SLC27A3Q5K4L6 730 aa17.14■□□□□ 0.33
HDAC11-219ENST00000495099 TMC1Q8TDI8 760 aa17.14■□□□□ 0.33
HDAC11-219ENST00000495099 ZNF692Q9BU19 519 aaPredicted RBP17.14■□□□□ 0.33
HDAC11-219ENST00000495099 TONSLQ96HA7 1378 aa17.14■□□□□ 0.33
HDAC11-219ENST00000495099 ABCC6O95255 1503 aa17.11■□□□□ 0.33
HDAC11-219ENST00000495099 LY75O60449 1722 aa17.11■□□□□ 0.33
HDAC11-219ENST00000495099 ARHGEF25Q86VW2 580 aa17.11■□□□□ 0.33
HDAC11-219ENST00000495099 CARD10Q9BWT7 1032 aa17.11■□□□□ 0.33
HDAC11-219ENST00000495099 CPSF1Q10570 1443 aaKnown RBP17.11■□□□□ 0.33
HDAC11-219ENST00000495099 MON2Q7Z3U7 1717 aa17.1■□□□□ 0.33
HDAC11-219ENST00000495099 NME9Q86XW9 330 aa17.1■□□□□ 0.33
HDAC11-219ENST00000495099 SLC12A5Q9H2X9 1139 aa17.1■□□□□ 0.33
HDAC11-219ENST00000495099 TTC21AQ8NDW8 1320 aa17.1■□□□□ 0.33
HDAC11-219ENST00000495099 KCNH5Q8NCM2 988 aa17.09■□□□□ 0.33
HDAC11-219ENST00000495099 N4BP2Q86UW6 1770 aaPredicted RBP17.08■□□□□ 0.33
HDAC11-219ENST00000495099 MLLT1Q03111 559 aaPredicted RBP17.08■□□□□ 0.32
HDAC11-219ENST00000495099 PKD1L3Q7Z443 1732 aa17.07■□□□□ 0.32
HDAC11-219ENST00000495099 KCPQ6ZWJ8 1503 aa17.07■□□□□ 0.32
HDAC11-219ENST00000495099 NFAT5O94916 1531 aa17.06■□□□□ 0.32
HDAC11-219ENST00000495099 CD163L1Q9NR16 1453 aa17.06■□□□□ 0.32
HDAC11-219ENST00000495099 FOXN1O15353 648 aa17.06■□□□□ 0.32
HDAC11-219ENST00000495099 RRAGCQ9HB90 399 aa17.06■□□□□ 0.32
HDAC11-219ENST00000495099 SBNO2Q9Y2G9 1366 aa17.05■□□□□ 0.32
HDAC11-219ENST00000495099 TNRC6CQ9HCJ0 1690 aaKnown RBP17.05■□□□□ 0.32
HDAC11-219ENST00000495099 HDGFL2Q7Z4V5 671 aaPredicted RBP17.05■□□□□ 0.32
HDAC11-219ENST00000495099 LTN1O94822 1766 aa17.05■□□□□ 0.32
HDAC11-219ENST00000495099 ARHGAP27Q6ZUM4 889 aa17.04■□□□□ 0.32
HDAC11-219ENST00000495099 SMC1BQ8NDV3 1235 aa17.04■□□□□ 0.32
HDAC11-219ENST00000495099 SYTL4Q96C24 671 aaPredicted RBP17.04■□□□□ 0.32
HDAC11-219ENST00000495099 CCDC7Q96M83 1385 aa17.03■□□□□ 0.32
HDAC11-219ENST00000495099 ST20-MTHFSA0A0A6YYL1 179 aa17.03■□□□□ 0.32
HDAC11-219ENST00000495099 ABHD8Q96I13 439 aa17.03■□□□□ 0.32
HDAC11-219ENST00000495099 DOT1LQ8TEK3 1739 aa17.03■□□□□ 0.32
HDAC11-219ENST00000495099 C5P01031 1676 aa17.02■□□□□ 0.32
HDAC11-219ENST00000495099 NLRP2Q9NX02 1062 aa17.02■□□□□ 0.32
HDAC11-219ENST00000495099 CCNL1Q9UK58 526 aaPredicted RBP17.02■□□□□ 0.32
HDAC11-219ENST00000495099 BCS1LQ9Y276 419 aa17.02■□□□□ 0.32
HDAC11-219ENST00000495099 A0A1W2PP64 1363 aa17.02■□□□□ 0.31
HDAC11-219ENST00000495099 USP54Q70EL1 1684 aa17.01■□□□□ 0.31
HDAC11-219ENST00000495099 TRIM26Q12899 539 aaPredicted RBP17.01■□□□□ 0.31
HDAC11-219ENST00000495099 C9orf131Q5VYM1 1079 aa17■□□□□ 0.31
HDAC11-219ENST00000495099 PRDM10Q9NQV6 1147 aa17■□□□□ 0.31
HDAC11-219ENST00000495099 TERF2IPQ9NYB0 399 aa17■□□□□ 0.31
HDAC11-219ENST00000495099 USP31Q70CQ4 1352 aa17■□□□□ 0.31
HDAC11-219ENST00000495099 KDM2BQ8NHM5 1336 aa16.99■□□□□ 0.31
HDAC11-219ENST00000495099 FBLN1P23142 703 aa16.99■□□□□ 0.31
HDAC11-219ENST00000495099 SMIM5Q71RC9 77 aa16.99■□□□□ 0.31
HDAC11-219ENST00000495099 LTV1Q96GA3 475 aaPredicted RBP16.99■□□□□ 0.31
HDAC11-219ENST00000495099 TESK2Q96S53 571 aa16.99■□□□□ 0.31
HDAC11-219ENST00000495099 KIAA1551Q9HCM1 1747 aa16.99■□□□□ 0.31
HDAC11-219ENST00000495099 EDC4Q6P2E9 1401 aaKnown RBP16.98■□□□□ 0.31
HDAC11-219ENST00000495099 CCDC85CA6NKD9 419 aa16.98■□□□□ 0.31
HDAC11-219ENST00000495099 ANKRD24Q8TF21 1146 aa16.98■□□□□ 0.31
HDAC11-219ENST00000495099 MKRN1Q9UHC7 482 aaKnown RBP16.98■□□□□ 0.31
HDAC11-219ENST00000495099 TAF1LQ8IZX4 1826 aa16.98■□□□□ 0.31
HDAC11-219ENST00000495099 DDX54Q8TDD1 881 aaKnown RBP16.97■□□□□ 0.31
HDAC11-219ENST00000495099 ERBB3P21860 1342 aa16.96■□□□□ 0.31
HDAC11-219ENST00000495099 IL2RBP14784 551 aa16.96■□□□□ 0.31
HDAC11-219ENST00000495099 PRIM1P49642 420 aaKnown RBP16.96■□□□□ 0.31
HDAC11-219ENST00000495099 PLEKHG2Q9H7P9 1386 aa16.96■□□□□ 0.31
HDAC11-219ENST00000495099 C10orf71Q711Q0 1435 aa16.95■□□□□ 0.3
HDAC11-219ENST00000495099 LBX1P52954 281 aa16.94■□□□□ 0.3
HDAC11-219ENST00000495099 KIF13BQ9NQT8 1826 aa16.93■□□□□ 0.3
HDAC11-219ENST00000495099 PXDNLA1KZ92 1463 aa16.93■□□□□ 0.3
HDAC11-219ENST00000495099 SBF1O95248 1867 aa16.93■□□□□ 0.3
HDAC11-219ENST00000495099 RGPD2P0DJD1 1756 aa16.93■□□□□ 0.3
HDAC11-219ENST00000495099 CTCFP49711 727 aaPredicted RBP16.93■□□□□ 0.3
HDAC11-219ENST00000495099 AIDAQ96BJ3 306 aa16.93■□□□□ 0.3
HDAC11-219ENST00000495099 BRCA1P38398 1863 aaKnown RBP16.93■□□□□ 0.3
HDAC11-219ENST00000495099 PDE4DIPQ5VU43 2346 aa16.92■□□□□ 0.3
HDAC11-219ENST00000495099 TNRC18O15417 2968 aaPredicted RBP16.92■□□□□ 0.3
HDAC11-219ENST00000495099 COG3Q96JB2 828 aa16.92■□□□□ 0.3
HDAC11-219ENST00000495099 TOGARAM1Q9Y4F4 1720 aa16.92■□□□□ 0.3
HDAC11-219ENST00000495099 NSD2O96028 1365 aa16.91■□□□□ 0.3
HDAC11-219ENST00000495099 A0A0G2JLW4 131 aa16.91■□□□□ 0.3
HDAC11-219ENST00000495099 FCHSD2O94868 740 aa16.91■□□□□ 0.3
HDAC11-219ENST00000495099 PHF14O94880 888 aa16.91■□□□□ 0.3
HDAC11-219ENST00000495099 PUS7Q96PZ0 661 aaKnown RBP16.91■□□□□ 0.3
HDAC11-219ENST00000495099 RNF181Q9P0P0 153 aa16.91■□□□□ 0.3
HDAC11-219ENST00000495099 ARFGEF1Q9Y6D6 1849 aa16.91■□□□□ 0.3
HDAC11-219ENST00000495099 UBR3Q6ZT12 1888 aa16.9■□□□□ 0.3
HDAC11-219ENST00000495099 USP47Q96K76 1375 aa16.9■□□□□ 0.3
HDAC11-219ENST00000495099 RGS19P49795 217 aa16.9■□□□□ 0.3
HDAC11-219ENST00000495099 FLAD1Q8NFF5 587 aa16.9■□□□□ 0.3
HDAC11-219ENST00000495099 IP6K1Q92551 441 aa16.9■□□□□ 0.3
HDAC11-219ENST00000495099 CFAP44Q96MT7 982 aa16.9■□□□□ 0.3
HDAC11-219ENST00000495099 GGNBP2Q9H3C7 697 aa16.9■□□□□ 0.3
HDAC11-219ENST00000495099 MAP3K19Q56UN5 1328 aa16.9■□□□□ 0.3
HDAC11-219ENST00000495099 AMPHP49418 695 aa16.89■□□□□ 0.29
HDAC11-219ENST00000495099 AMIGO3Q86WK7 504 aa16.89■□□□□ 0.29
HDAC11-219ENST00000495099 PCGF6Q9BYE7 350 aa16.89■□□□□ 0.29
HDAC11-219ENST00000495099 ANKRD36BQ8N2N9 1353 aa16.89■□□□□ 0.29
HDAC11-219ENST00000495099 TMF1P82094 1093 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms