RNA–Protein interactions for RNA: ENST00000495082.5

SLC13A3-211, Transcript of solute carrier family 13 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC13A3, Length 1,887 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-211ENST00000495082 PLEKHO1Q53GL0 409 aaPredicted RBP15.07■□□□□ 0
SLC13A3-211ENST00000495082 ILDR1Q86SU0 546 aaPredicted RBP15.07■□□□□ 0
SLC13A3-211ENST00000495082 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.07■□□□□ 01e-9■□□□□ 8.3
SLC13A3-211ENST00000495082 NWD2Q9ULI1 1742 aa15.07■□□□□ 0
SLC13A3-211ENST00000495082 TRMT2AQ8IZ69 625 aaKnown RBP15.06■□□□□ 0
SLC13A3-211ENST00000495082 TATP17735 454 aaPredicted RBP15.06■□□□□ 0
SLC13A3-211ENST00000495082 CALD1Q05682 793 aaKnown RBP15.06■□□□□ 0
SLC13A3-211ENST00000495082 MEGF6O75095 1541 aa15.05■□□□□ 0
SLC13A3-211ENST00000495082 NRAPQ86VF7 1730 aa15.05■□□□□ 0
SLC13A3-211ENST00000495082 MAP3K5Q99683 1374 aa15.04■□□□□ -0
SLC13A3-211ENST00000495082 DUSP27Q5VZP5 1158 aa15.04■□□□□ -0
SLC13A3-211ENST00000495082 FNBP4Q8N3X1 1017 aaPredicted RBP15.04■□□□□ -0
SLC13A3-211ENST00000495082 SPINK5Q9NQ38 1064 aaPredicted RBP15.04■□□□□ -0
SLC13A3-211ENST00000495082 OVOS2A0A0G2JMS6 1433 aa15.04■□□□□ -0
SLC13A3-211ENST00000495082 GNAT3A8MTJ3 354 aa15.03■□□□□ -0
SLC13A3-211ENST00000495082 DLG5Q8TDM6 1919 aa15.03■□□□□ -0
SLC13A3-211ENST00000495082 IL2RBP14784 551 aa15.03■□□□□ -0
SLC13A3-211ENST00000495082 AKAP4Q5JQC9 854 aa15.03■□□□□ -0
SLC13A3-211ENST00000495082 NGLY1Q96IV0 654 aa15.03■□□□□ -0
SLC13A3-211ENST00000495082 SPG7Q9UQ90 795 aa15.03■□□□□ -0
SLC13A3-211ENST00000495082 ZNF530Q6P9A1 599 aaPredicted RBP15.02■□□□□ -0
SLC13A3-211ENST00000495082 UNC5CLQ8IV45 518 aa15.02■□□□□ -0
SLC13A3-211ENST00000495082 RTF1Q92541 710 aaKnown RBP15.02■□□□□ -0
SLC13A3-211ENST00000495082 C8orf37Q96NL8 207 aa15.02■□□□□ -0
SLC13A3-211ENST00000495082 MYH16Q9H6N6 1097 aa15.02■□□□□ -0
SLC13A3-211ENST00000495082 FBXO41Q8TF61 875 aa15.01□□□□□ -0.01
SLC13A3-211ENST00000495082 THRAP3Q9Y2W1 955 aaKnown RBP15.01□□□□□ -0.01
SLC13A3-211ENST00000495082 PKD1L3Q7Z443 1732 aa15.01□□□□□ -0.01
SLC13A3-211ENST00000495082 PARP4Q9UKK3 1724 aaKnown RBP15.01□□□□□ -0.01
SLC13A3-211ENST00000495082 BCL9LQ86UU0 1499 aa15.01□□□□□ -0.01
SLC13A3-211ENST00000495082 SPATA31A1Q5TZJ5 1347 aa15.01□□□□□ -0.01
SLC13A3-211ENST00000495082 DISP2A7MBM2 1401 aa15.01□□□□□ -0.01
SLC13A3-211ENST00000495082 THUMPD2Q9BTF0 503 aaKnown RBP15.01□□□□□ -0.01
SLC13A3-211ENST00000495082 IFT57Q9NWB7 429 aa15.01□□□□□ -0.01
SLC13A3-211ENST00000495082 SPATA31A5Q5VU36 1347 aa15□□□□□ -0.01
SLC13A3-211ENST00000495082 SPATA31A7Q8IWB4 1347 aa15□□□□□ -0.01
SLC13A3-211ENST00000495082 DCTN1Q14203 1278 aa15□□□□□ -0.01
SLC13A3-211ENST00000495082 C1orf141Q5JVX7 400 aa15□□□□□ -0.01
SLC13A3-211ENST00000495082 MCM10Q7L590 875 aa15□□□□□ -0.01
SLC13A3-211ENST00000495082 CEMIPQ8WUJ3 1361 aa14.99□□□□□ -0.01
SLC13A3-211ENST00000495082 ZNF853P0CG23 659 aa14.99□□□□□ -0.01
SLC13A3-211ENST00000495082 MEX3CQ5U5Q3 659 aaKnown RBP14.99□□□□□ -0.01
SLC13A3-211ENST00000495082 GNAI1P63096 354 aa14.99□□□□□ -0.01
SLC13A3-211ENST00000495082 VPS72Q15906 364 aa14.99□□□□□ -0.01
SLC13A3-211ENST00000495082 ZCRB1Q8TBF4 217 aaKnown RBP14.99□□□□□ -0.01
SLC13A3-211ENST00000495082 CFAP44Q96MT7 982 aa14.99□□□□□ -0.01
SLC13A3-211ENST00000495082 CDCA7Q9BWT1 371 aaPredicted RBP14.99□□□□□ -0.01
SLC13A3-211ENST00000495082 USP35Q9P2H5 1018 aa14.99□□□□□ -0.01
SLC13A3-211ENST00000495082 LRRC37A3O60309 1634 aa14.99□□□□□ -0.01
SLC13A3-211ENST00000495082 IL17REQ8NFR9 667 aa14.98□□□□□ -0.01
SLC13A3-211ENST00000495082 PCDH11XQ9BZA7 1347 aa14.98□□□□□ -0.01
SLC13A3-211ENST00000495082 PCDH11YQ9BZA8 1340 aa14.98□□□□□ -0.01
SLC13A3-211ENST00000495082 FANCIQ9NVI1 1328 aa14.98□□□□□ -0.01
SLC13A3-211ENST00000495082 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.98□□□□□ -0.01
SLC13A3-211ENST00000495082 PHKG2P15735 406 aa14.97□□□□□ -0.01
SLC13A3-211ENST00000495082 IFNL2Q8IZJ0 200 aa14.97□□□□□ -0.01
SLC13A3-211ENST00000495082 CHL1O00533 1208 aa14.97□□□□□ -0.01
SLC13A3-211ENST00000495082 BARGINQ6ZT62 677 aa14.97□□□□□ -0.01
SLC13A3-211ENST00000495082 USP21Q9UK80 565 aa14.97□□□□□ -0.01
SLC13A3-211ENST00000495082 ADAMTS7Q9UKP4 1686 aa14.96□□□□□ -0.01
SLC13A3-211ENST00000495082 CYP27B1O15528 508 aa14.96□□□□□ -0.01
SLC13A3-211ENST00000495082 HSP90AB1P08238 724 aaKnown RBP14.96□□□□□ -0.01
SLC13A3-211ENST00000495082 BABAM1Q9NWV8 329 aa14.96□□□□□ -0.01
SLC13A3-211ENST00000495082 RNMTO43148 476 aaKnown RBP14.95□□□□□ -0.02
SLC13A3-211ENST00000495082 TSR2Q969E8 191 aaKnown RBP14.95□□□□□ -0.02
SLC13A3-211ENST00000495082 LGR6Q9HBX8 967 aa14.95□□□□□ -0.02
SLC13A3-211ENST00000495082 AFF2P51816 1311 aa14.95□□□□□ -0.02
SLC13A3-211ENST00000495082 WNK3Q9BYP7 1800 aa14.94□□□□□ -0.02
SLC13A3-211ENST00000495082 CT47B1P0C2W7 299 aaPredicted RBP14.94□□□□□ -0.02
SLC13A3-211ENST00000495082 NKX1-1Q15270 411 aaPredicted RBP14.94□□□□□ -0.02
SLC13A3-211ENST00000495082 MPRIPQ6WCQ1 1025 aa14.94□□□□□ -0.02
SLC13A3-211ENST00000495082 DCAF5Q96JK2 942 aa14.94□□□□□ -0.02
SLC13A3-211ENST00000495082 MBIPQ9NS73 344 aa14.94□□□□□ -0.02
SLC13A3-211ENST00000495082 KDM6AO15550 1401 aaPredicted RBP14.94□□□□□ -0.02
SLC13A3-211ENST00000495082 RCAN3Q9UKA8 241 aa14.93□□□□□ -0.02
SLC13A3-211ENST00000495082 CCDC9Q9Y3X0 531 aaKnown RBP14.93□□□□□ -0.02
SLC13A3-211ENST00000495082 LAS1LQ9Y4W2 734 aaKnown RBP14.93□□□□□ -0.02
SLC13A3-211ENST00000495082 TAF7Q15545 349 aaPredicted RBP14.93□□□□□ -0.02
SLC13A3-211ENST00000495082 TNS2Q63HR2 1409 aa14.92□□□□□ -0.02
SLC13A3-211ENST00000495082 SHANK3Q9BYB0 1731 aa14.92□□□□□ -0.02
SLC13A3-211ENST00000495082 ATRNO75882 1429 aa14.92□□□□□ -0.02
SLC13A3-211ENST00000495082 EXOC5O00471 708 aa14.91□□□□□ -0.02
SLC13A3-211ENST00000495082 MRC1P22897 1456 aa14.91□□□□□ -0.02
SLC13A3-211ENST00000495082 TEFQ10587 303 aa14.91□□□□□ -0.02
SLC13A3-211ENST00000495082 EXOSC9Q06265 439 aaKnown RBP14.91□□□□□ -0.02
SLC13A3-211ENST00000495082 TRPC5Q9UL62 973 aaPredicted RBP14.91□□□□□ -0.02
SLC13A3-211ENST00000495082 RNF123Q5XPI4 1314 aa14.9□□□□□ -0.02
SLC13A3-211ENST00000495082 TSPYL4Q9UJ04 414 aa14.9□□□□□ -0.02
SLC13A3-211ENST00000495082 SCN11AQ9UI33 1791 aa14.89□□□□□ -0.03
SLC13A3-211ENST00000495082 DDX54Q8TDD1 881 aaKnown RBP14.89□□□□□ -0.03
SLC13A3-211ENST00000495082 GJD4Q96KN9 370 aaPredicted RBP14.89□□□□□ -0.03
SLC13A3-211ENST00000495082 SLC52A2Q9HAB3 445 aa14.89□□□□□ -0.03
SLC13A3-211ENST00000495082 SUPT16HQ9Y5B9 1047 aaKnown RBP14.89□□□□□ -0.03
SLC13A3-211ENST00000495082 ERVV-2B6SEH9 535 aa14.89□□□□□ -0.03
SLC13A3-211ENST00000495082 DDB1Q16531 1140 aa14.89□□□□□ -0.03
SLC13A3-211ENST00000495082 ZNF428Q96B54 188 aa14.89□□□□□ -0.03
SLC13A3-211ENST00000495082 FAM98CQ17RN3 349 aaKnown RBP14.88□□□□□ -0.03
SLC13A3-211ENST00000495082 MIS18AQ9NYP9 233 aa14.88□□□□□ -0.03
SLC13A3-211ENST00000495082 SIPA1L3O60292 1781 aaPredicted RBP14.87□□□□□ -0.03
SLC13A3-211ENST00000495082 GLI3P10071 1580 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 142.1 ms