RNA–Protein interactions for RNA: ENST00000494891.5

NEPRO-222, Transcript of nucleolus and neural progenitor protein, human

TSL 4

Gene NEPRO, Length 547 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEPRO-222	ENST00000494891	RAPGEF4	Q8WZA2	1011 aa		14.12	□□□□□ -0.15
NEPRO-222	ENST00000494891	BTAF1	O14981	1849 aa		14.11	□□□□□ -0.15
NEPRO-222	ENST00000494891	PER1	O15534	1290 aa	Predicted RBP	14.11	□□□□□ -0.15
NEPRO-222	ENST00000494891	KCNQ2	O43526	872 aa		14.11	□□□□□ -0.15
NEPRO-222	ENST00000494891	R3HDM1	Q15032	1099 aa	Known RBP	14.11	□□□□□ -0.15
NEPRO-222	ENST00000494891	AMER1	Q5JTC6	1135 aa	Predicted RBP	14.11	□□□□□ -0.15
NEPRO-222	ENST00000494891	PKD1L3	Q7Z443	1732 aa		14.11	□□□□□ -0.15
NEPRO-222	ENST00000494891	PSD	A5PKW4	1024 aa	Predicted RBP	14.1	□□□□□ -0.15
NEPRO-222	ENST00000494891	TAT	P17735	454 aa	Predicted RBP	14.1	□□□□□ -0.15
NEPRO-222	ENST00000494891	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	14.1	□□□□□ -0.15
NEPRO-222	ENST00000494891	KNSTRN	Q9Y448	316 aa		14.1	□□□□□ -0.15
NEPRO-222	ENST00000494891	NPC1L1	Q9UHC9	1359 aa		14.09	□□□□□ -0.15
NEPRO-222	ENST00000494891	TXNRD1	Q16881	649 aa		14.09	□□□□□ -0.15
NEPRO-222	ENST00000494891	PCDH11X	Q9BZA7	1347 aa		14.09	□□□□□ -0.15
NEPRO-222	ENST00000494891	PCDH11Y	Q9BZA8	1340 aa		14.09	□□□□□ -0.15
NEPRO-222	ENST00000494891	DDX54	Q8TDD1	881 aa	Known RBP	14.08	□□□□□ -0.16
NEPRO-222	ENST00000494891	PAPPA	Q13219	1627 aa		14.08	□□□□□ -0.16
NEPRO-222	ENST00000494891	DOT1L	Q8TEK3	1739 aa		14.07	□□□□□ -0.16
NEPRO-222	ENST00000494891	USHBP1	Q8N6Y0	703 aa		14.07	□□□□□ -0.16
NEPRO-222	ENST00000494891	ACSBG1	Q96GR2	724 aa		14.07	□□□□□ -0.16
NEPRO-222	ENST00000494891	EYA1	Q99502	592 aa		14.07	□□□□□ -0.16
NEPRO-222	ENST00000494891	IGSF1	Q8N6C5	1336 aa		14.07	□□□□□ -0.16
NEPRO-222	ENST00000494891	PPM1G	O15355	546 aa	Predicted RBP	14.06	□□□□□ -0.16
NEPRO-222	ENST00000494891	EIF4A2	Q14240	407 aa	Known RBP	14.06	□□□□□ -0.16
NEPRO-222	ENST00000494891	NKX1-1	Q15270	411 aa	Predicted RBP	14.06	□□□□□ -0.16
NEPRO-222	ENST00000494891	MORC1	Q86VD1	984 aa		14.06	□□□□□ -0.16
NEPRO-222	ENST00000494891	KAT6B	Q8WYB5	2073 aa		14.06	□□□□□ -0.16
NEPRO-222	ENST00000494891	LY75	O60449	1722 aa		14.05	□□□□□ -0.16
NEPRO-222	ENST00000494891	CASZ1	Q86V15	1759 aa		14.05	□□□□□ -0.16
NEPRO-222	ENST00000494891	SLC27A3	Q5K4L6	730 aa		14.05	□□□□□ -0.16
NEPRO-222	ENST00000494891	ANO8	Q9HCE9	1232 aa	Predicted RBP	14.05	□□□□□ -0.16
NEPRO-222	ENST00000494891	CYP27B1	O15528	508 aa		14.04	□□□□□ -0.16
NEPRO-222	ENST00000494891	SPG7	Q9UQ90	795 aa		14.04	□□□□□ -0.16
NEPRO-222	ENST00000494891	TNNT2	P45379	298 aa	Predicted RBP	14.03	□□□□□ -0.16
NEPRO-222	ENST00000494891	PRIM1	P49642	420 aa	Known RBP	14.03	□□□□□ -0.16
NEPRO-222	ENST00000494891	SLC15A2	Q16348	729 aa		14.03	□□□□□ -0.16
NEPRO-222	ENST00000494891	QSER1	Q2KHR3	1735 aa		14.02	□□□□□ -0.16
NEPRO-222	ENST00000494891	KDR	P35968	1356 aa		14.02	□□□□□ -0.17
NEPRO-222	ENST00000494891	HMGB2	P26583	209 aa	Known RBP	14.02	□□□□□ -0.17
NEPRO-222	ENST00000494891	LRRC4B	Q9NT99	713 aa		14.01	□□□□□ -0.17
NEPRO-222	ENST00000494891	STK32B	Q9NY57	414 aa		14.01	□□□□□ -0.17
NEPRO-222	ENST00000494891	TOGARAM1	Q9Y4F4	1720 aa		14.01	□□□□□ -0.17
NEPRO-222	ENST00000494891	ITGB4	P16144	1822 aa		13.99	□□□□□ -0.17
NEPRO-222	ENST00000494891	IL13	P35225	146 aa		13.99	□□□□□ -0.17
NEPRO-222	ENST00000494891	IFNL2	Q8IZJ0	200 aa		13.99	□□□□□ -0.17
NEPRO-222	ENST00000494891	AKT1S1	Q96B36	256 aa		13.99	□□□□□ -0.17
NEPRO-222	ENST00000494891	SPON1	Q9HCB6	807 aa		13.99	□□□□□ -0.17
NEPRO-222	ENST00000494891	PHKG2	P15735	406 aa		13.98	□□□□□ -0.17
NEPRO-222	ENST00000494891	AMOT	Q4VCS5	1084 aa		13.98	□□□□□ -0.17
NEPRO-222	ENST00000494891	SYTL4	Q96C24	671 aa	Predicted RBP	13.98	□□□□□ -0.17
NEPRO-222	ENST00000494891	MTHFS	P49914	203 aa		13.97	□□□□□ -0.17
NEPRO-222	ENST00000494891	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.96	□□□□□ -0.17
NEPRO-222	ENST00000494891	SMARCC1	Q92922	1105 aa	Predicted RBP	13.96	□□□□□ -0.17
NEPRO-222	ENST00000494891	COL24A1	Q17RW2	1714 aa		13.95	□□□□□ -0.18
NEPRO-222	ENST00000494891	HSP90AB1	P08238	724 aa	Known RBP	13.95	□□□□□ -0.18
NEPRO-222	ENST00000494891	ZNF827	Q17R98	1081 aa		13.95	□□□□□ -0.18
NEPRO-222	ENST00000494891	SLC16A10	Q8TF71	515 aa		13.95	□□□□□ -0.18
NEPRO-222	ENST00000494891	ERVV-2	B6SEH9	535 aa		13.94	□□□□□ -0.18
NEPRO-222	ENST00000494891	PIGB	Q92521	554 aa		13.94	□□□□□ -0.18
NEPRO-222	ENST00000494891	DCAF5	Q96JK2	942 aa		13.94	□□□□□ -0.18
NEPRO-222	ENST00000494891	SGIP1	Q9BQI5	828 aa		13.94	□□□□□ -0.18
NEPRO-222	ENST00000494891	PDGFD	Q9GZP0	370 aa	Predicted RBP	13.94	□□□□□ -0.18
NEPRO-222	ENST00000494891	MTFR1L	Q9H019	292 aa		13.94	□□□□□ -0.18
NEPRO-222	ENST00000494891	CCNL1	Q9UK58	526 aa	Predicted RBP	13.94	□□□□□ -0.18
NEPRO-222	ENST00000494891	TAF1L	Q8IZX4	1826 aa		13.94	□□□□□ -0.18
NEPRO-222	ENST00000494891	ZNF831	Q5JPB2	1677 aa		13.94	□□□□□ -0.18
NEPRO-222	ENST00000494891	PALLD	Q8WX93	1383 aa		13.94	□□□□□ -0.18
NEPRO-222	ENST00000494891	COL3A1	P02461	1466 aa	Predicted RBP	13.93	□□□□□ -0.18
NEPRO-222	ENST00000494891	PTGER2	P43116	358 aa		13.93	□□□□□ -0.18
NEPRO-222	ENST00000494891	CC2D1B	Q5T0F9	858 aa	Known RBP	13.93	□□□□□ -0.18
NEPRO-222	ENST00000494891	MPRIP	Q6WCQ1	1025 aa		13.93	□□□□□ -0.18
NEPRO-222	ENST00000494891	TUBGCP6	Q96RT7	1819 aa		13.92	□□□□□ -0.18
NEPRO-222	ENST00000494891	C5	P01031	1676 aa		13.92	□□□□□ -0.18
NEPRO-222	ENST00000494891	SULT6B1	Q6IMI4	303 aa		13.92	□□□□□ -0.18
NEPRO-222	ENST00000494891	AEBP1	Q8IUX7	1158 aa		13.92	□□□□□ -0.18
NEPRO-222	ENST00000494891	PNPLA7	Q6ZV29	1317 aa		13.91	□□□□□ -0.18
NEPRO-222	ENST00000494891	DIAPH1	O60610	1272 aa	Known RBP	13.91	□□□□□ -0.18
NEPRO-222	ENST00000494891	TMOD3	Q9NYL9	352 aa		13.91	□□□□□ -0.18
NEPRO-222	ENST00000494891	KDM6A	O15550	1401 aa	Predicted RBP	13.9	□□□□□ -0.18
NEPRO-222	ENST00000494891	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.9	□□□□□ -0.18
NEPRO-222	ENST00000494891	ADAMTS7	Q9UKP4	1686 aa		13.89	□□□□□ -0.19
NEPRO-222	ENST00000494891	MAP3K5	Q99683	1374 aa		13.89	□□□□□ -0.19
NEPRO-222	ENST00000494891	ZBTB7A	O95365	584 aa		13.89	□□□□□ -0.19
NEPRO-222	ENST00000494891	FLAD1	Q8NFF5	587 aa		13.89	□□□□□ -0.19
NEPRO-222	ENST00000494891	TFCP2L1	Q9NZI6	479 aa		13.89	□□□□□ -0.19
NEPRO-222	ENST00000494891	SCN11A	Q9UI33	1791 aa		13.88	□□□□□ -0.19
NEPRO-222	ENST00000494891	C4B	P0C0L5	1744 aa		13.88	□□□□□ -0.19
NEPRO-222	ENST00000494891	LOC102724428	A0A0B4J2F2	783 aa		13.88	□□□□□ -0.19
NEPRO-222	ENST00000494891	KCNQ4	P56696	695 aa		13.88	□□□□□ -0.19
NEPRO-222	ENST00000494891	SIK1	P57059	783 aa		13.88	□□□□□ -0.19
NEPRO-222	ENST00000494891	AKAP4	Q5JQC9	854 aa		13.88	□□□□□ -0.19
NEPRO-222	ENST00000494891	C1orf141	Q5JVX7	400 aa		13.88	□□□□□ -0.19
NEPRO-222	ENST00000494891	ATG3	Q9NT62	314 aa		13.88	□□□□□ -0.19
NEPRO-222	ENST00000494891	CIC	Q96RK0	1608 aa	Predicted RBP	13.87	□□□□□ -0.19
NEPRO-222	ENST00000494891	PPP1R1B	Q9UD71	204 aa	Predicted RBP	13.87	□□□□□ -0.19
NEPRO-222	ENST00000494891	ASAP1	Q9ULH1	1129 aa		13.87	□□□□□ -0.19
NEPRO-222	ENST00000494891	MRC1	P22897	1456 aa		13.87	□□□□□ -0.19
NEPRO-222	ENST00000494891	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.86	□□□□□ -0.19
NEPRO-222	ENST00000494891	UBR3	Q6ZT12	1888 aa		13.86	□□□□□ -0.19
NEPRO-222	ENST00000494891	SSFA2	P28290	1259 aa		13.84	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms