RNA–Protein interactions for RNA: ENST00000494841.1

RPGR-210, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 1 (best)

Gene RPGR, Length 653 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-210ENST00000494841 CFAP99D6REC4 459 aa11.16□□□□□ -0.62
RPGR-210ENST00000494841 FAM160A2Q8N612 972 aaPredicted RBP11.16□□□□□ -0.62
RPGR-210ENST00000494841 ANKRD50Q9ULJ7 1429 aa11.16□□□□□ -0.62
RPGR-210ENST00000494841 REREQ9P2R6 1566 aa11.16□□□□□ -0.62
RPGR-210ENST00000494841 MSS51Q4VC12 460 aa11.15□□□□□ -0.62
RPGR-210ENST00000494841 PRR7Q8TB68 274 aa11.15□□□□□ -0.62
RPGR-210ENST00000494841 AGLP35573 1532 aa11.14□□□□□ -0.63
RPGR-210ENST00000494841 PRDM9Q9NQV7 894 aa11.14□□□□□ -0.63
RPGR-210ENST00000494841 PLSCR2Q9NRY7 297 aa11.14□□□□□ -0.63
RPGR-210ENST00000494841 HFM1A2PYH4 1435 aa11.14□□□□□ -0.63
RPGR-210ENST00000494841 BCORL1Q5H9F3 1711 aa11.13□□□□□ -0.63
RPGR-210ENST00000494841 ERBINQ96RT1 1412 aa11.13□□□□□ -0.63
RPGR-210ENST00000494841 SETD5Q9C0A6 1442 aa11.13□□□□□ -0.63
RPGR-210ENST00000494841 GCC2Q8IWJ2 1684 aa11.13□□□□□ -0.63
RPGR-210ENST00000494841 EIF2AK4Q9P2K8 1649 aaKnown RBP11.11□□□□□ -0.63
RPGR-210ENST00000494841 TRIM52Q96A61 297 aa11.11□□□□□ -0.63
RPGR-210ENST00000494841 WASHC2CQ9Y4E1 1318 aa11.1□□□□□ -0.63
RPGR-210ENST00000494841 ESF1Q9H501 851 aaKnown RBP11.1□□□□□ -0.63
RPGR-210ENST00000494841 RAB3GAP2Q9H2M9 1393 aa11.1□□□□□ -0.63
RPGR-210ENST00000494841 MROH1Q8NDA8 1641 aa11.09□□□□□ -0.63
RPGR-210ENST00000494841 ADAMTSL3P82987 1691 aa11.09□□□□□ -0.63
RPGR-210ENST00000494841 DXOO77932 396 aaKnown RBP11.09□□□□□ -0.63
RPGR-210ENST00000494841 S1PR4O95977 384 aa11.09□□□□□ -0.63
RPGR-210ENST00000494841 JUNDP17535 347 aa11.09□□□□□ -0.63
RPGR-210ENST00000494841 MMP16P51512 607 aa11.09□□□□□ -0.63
RPGR-210ENST00000494841 DESI1Q6ICB0 168 aa11.09□□□□□ -0.63
RPGR-210ENST00000494841 SLC6A16Q9GZN6 736 aa11.09□□□□□ -0.63
RPGR-210ENST00000494841 RNF17Q9BXT8 1623 aaKnown RBP11.09□□□□□ -0.63
RPGR-210ENST00000494841 CLTCQ00610 1675 aaKnown RBP11.08□□□□□ -0.64
RPGR-210ENST00000494841 NUP155O75694 1391 aa11.08□□□□□ -0.64
RPGR-210ENST00000494841 CFAP65Q6ZU64 1925 aaKnown RBP11.08□□□□□ -0.64
RPGR-210ENST00000494841 AP1G2O75843 785 aa11.08□□□□□ -0.64
RPGR-210ENST00000494841 CEBPAP49715 358 aaPredicted RBP11.08□□□□□ -0.64
RPGR-210ENST00000494841 TMEM259Q4ZIN3 620 aa11.08□□□□□ -0.64
RPGR-210ENST00000494841 IFFO2Q5TF58 517 aa11.08□□□□□ -0.64
RPGR-210ENST00000494841 HELBQ8NG08 1087 aaPredicted RBP11.08□□□□□ -0.64
RPGR-210ENST00000494841 TSC1Q92574 1164 aa11.08□□□□□ -0.64
RPGR-210ENST00000494841 PLA2G2EQ9NZK7 142 aa11.08□□□□□ -0.64
RPGR-210ENST00000494841 DEPDC5O75140 1603 aa11.08□□□□□ -0.64
RPGR-210ENST00000494841 MADDQ8WXG6 1647 aa11.08□□□□□ -0.64
RPGR-210ENST00000494841 FER1L4A9Z1Z3 1794 aa11.08□□□□□ -0.64
RPGR-210ENST00000494841 CEP152O94986 1710 aa11.07□□□□□ -0.64
RPGR-210ENST00000494841 GTF3C3Q9Y5Q9 886 aa11.07□□□□□ -0.64
RPGR-210ENST00000494841 RIMS1Q86UR5 1692 aaKnown RBP11.07□□□□□ -0.64
RPGR-210ENST00000494841 KANK1Q14678 1352 aa11.06□□□□□ -0.64
RPGR-210ENST00000494841 USP17L8P0C7I0 530 aa11.06□□□□□ -0.64
RPGR-210ENST00000494841 CTDSPL2Q05D32 466 aa11.06□□□□□ -0.64
RPGR-210ENST00000494841 UNC13BO14795 1591 aa11.06□□□□□ -0.64
RPGR-210ENST00000494841 ZMYM3Q14202 1370 aa11.05□□□□□ -0.64
RPGR-210ENST00000494841 PRDM15P57071 1507 aaPredicted RBP11.05□□□□□ -0.64
RPGR-210ENST00000494841 PER1O15534 1290 aaPredicted RBP11.05□□□□□ -0.64
RPGR-210ENST00000494841 BANK1Q8NDB2 785 aa11.05□□□□□ -0.64
RPGR-210ENST00000494841 LYPD8Q6UX82 237 aa11.04□□□□□ -0.64
RPGR-210ENST00000494841 ABCC3O15438 1527 aa11.04□□□□□ -0.64
RPGR-210ENST00000494841 KDM5DQ9BY66 1539 aa11.04□□□□□ -0.64
RPGR-210ENST00000494841 VWDEQ8N2E2 1590 aa11.03□□□□□ -0.64
RPGR-210ENST00000494841 MPHOSPH9Q99550 1183 aa11.03□□□□□ -0.64
RPGR-210ENST00000494841 C3P01024 1663 aa11.02□□□□□ -0.64
RPGR-210ENST00000494841 PTPRMP28827 1452 aa11.02□□□□□ -0.65
RPGR-210ENST00000494841 PTPRNQ16849 979 aa11.02□□□□□ -0.65
RPGR-210ENST00000494841 LRRN4Q8WUT4 740 aa11.02□□□□□ -0.65
RPGR-210ENST00000494841 FAM135AQ9P2D6 1515 aa11.02□□□□□ -0.65
RPGR-210ENST00000494841 IQGAP3Q86VI3 1631 aa11.02□□□□□ -0.65
RPGR-210ENST00000494841 CNTLNQ9NXG0 1405 aa11.01□□□□□ -0.65
RPGR-210ENST00000494841 PZPP20742 1482 aa11.01□□□□□ -0.65
RPGR-210ENST00000494841 RNF223E7ERA6 249 aa11.01□□□□□ -0.65
RPGR-210ENST00000494841 MCM6Q14566 821 aa11.01□□□□□ -0.65
RPGR-210ENST00000494841 PPP1R18Q6NYC8 613 aa11.01□□□□□ -0.65
RPGR-210ENST00000494841 SNRKQ9NRH2 765 aa11.01□□□□□ -0.65
RPGR-210ENST00000494841 CAMSAP1Q5T5Y3 1602 aa11.01□□□□□ -0.65
RPGR-210ENST00000494841 MTMR14Q8NCE2 650 aa11□□□□□ -0.65
RPGR-210ENST00000494841 NUDT12Q9BQG2 462 aa11□□□□□ -0.65
RPGR-210ENST00000494841 HMX1Q9NP08 348 aaPredicted RBP11□□□□□ -0.65
RPGR-210ENST00000494841 MROH2AA6NES4 1674 aa11□□□□□ -0.65
RPGR-210ENST00000494841 ZC3H13Q5T200 1668 aaKnown RBP11□□□□□ -0.65
RPGR-210ENST00000494841 LMTK2Q8IWU2 1503 aa10.99□□□□□ -0.65
RPGR-210ENST00000494841 E9PCH4 1651 aa10.99□□□□□ -0.65
RPGR-210ENST00000494841 TET3O43151 1660 aa10.99□□□□□ -0.65
RPGR-210ENST00000494841 PPEF1O14829 653 aaPredicted RBP10.99□□□□□ -0.65
RPGR-210ENST00000494841 CCNYL3P0C7X3 344 aa10.99□□□□□ -0.65
RPGR-210ENST00000494841 GGCXP38435 758 aa10.99□□□□□ -0.65
RPGR-210ENST00000494841 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.99□□□□□ -0.65
RPGR-210ENST00000494841 FCF1Q9Y324 198 aaKnown RBP10.99□□□□□ -0.65
RPGR-210ENST00000494841 NPATQ14207 1427 aa10.99□□□□□ -0.65
RPGR-210ENST00000494841 A0A0G2JS52 829 aa10.98□□□□□ -0.65
RPGR-210ENST00000494841 F12P00748 615 aaPredicted RBP10.98□□□□□ -0.65
RPGR-210ENST00000494841 EFCAB6Q5THR3 1501 aa10.98□□□□□ -0.65
RPGR-210ENST00000494841 SOCS7O14512 581 aa10.97□□□□□ -0.65
RPGR-210ENST00000494841 ANKLE1Q8NAG6 615 aa10.97□□□□□ -0.65
RPGR-210ENST00000494841 ACIN1Q9UKV3 1341 aaKnown RBP10.97□□□□□ -0.65
RPGR-210ENST00000494841 ARHGAP31Q2M1Z3 1444 aa10.97□□□□□ -0.65
RPGR-210ENST00000494841 FLIIQ13045 1269 aa10.96□□□□□ -0.65
RPGR-210ENST00000494841 GJD4Q96KN9 370 aaPredicted RBP10.96□□□□□ -0.65
RPGR-210ENST00000494841 MAP10Q9P2G4 905 aa10.96□□□□□ -0.65
RPGR-210ENST00000494841 PREX1Q8TCU6 1659 aa10.95□□□□□ -0.66
RPGR-210ENST00000494841 PLA2G2CQ5R387 149 aa10.95□□□□□ -0.66
RPGR-210ENST00000494841 TRIM34Q9BYJ4 488 aa10.95□□□□□ -0.66
RPGR-210ENST00000494841 EVA1BQ9NVM1 165 aa10.95□□□□□ -0.66
RPGR-210ENST00000494841 CCDC24Q8N4L8 307 aa10.94□□□□□ -0.66
RPGR-210ENST00000494841 SETD1BQ9UPS6 1966 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms