RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 C8orf58Q8NAV2 365 aa13.64□□□□□ -0.23
PRPF4B-209ENST00000494674 KCNH5Q8NCM2 988 aa13.64□□□□□ -0.23
PRPF4B-209ENST00000494674 NOB1Q9ULX3 412 aaKnown RBP13.64□□□□□ -0.23
PRPF4B-209ENST00000494674 LMO7Q8WWI1 1683 aa13.63□□□□□ -0.23
PRPF4B-209ENST00000494674 MSH6P52701 1360 aa13.63□□□□□ -0.23
PRPF4B-209ENST00000494674 COL18A1P39060 1754 aa13.62□□□□□ -0.23
PRPF4B-209ENST00000494674 MS4A1P11836 297 aa13.62□□□□□ -0.23
PRPF4B-209ENST00000494674 KRT28Q7Z3Y7 464 aa13.62□□□□□ -0.23
PRPF4B-209ENST00000494674 MRPL50Q8N5N7 158 aaKnown RBP13.62□□□□□ -0.23
PRPF4B-209ENST00000494674 PCDHB15Q9Y5E8 787 aa13.62□□□□□ -0.23
PRPF4B-209ENST00000494674 PXDNQ92626 1479 aa13.62□□□□□ -0.23
PRPF4B-209ENST00000494674 ARHGEF25Q86VW2 580 aa13.61□□□□□ -0.23
PRPF4B-209ENST00000494674 KIAA0232Q92628 1395 aa13.61□□□□□ -0.23
PRPF4B-209ENST00000494674 GCP02774 474 aa13.61□□□□□ -0.23
PRPF4B-209ENST00000494674 ATF3P18847 181 aa13.61□□□□□ -0.23
PRPF4B-209ENST00000494674 TWISTNBQ3B726 338 aaPredicted RBP13.61□□□□□ -0.23
PRPF4B-209ENST00000494674 GAS2L2Q8NHY3 880 aa13.61□□□□□ -0.23
PRPF4B-209ENST00000494674 LTV1Q96GA3 475 aaPredicted RBP13.61□□□□□ -0.23
PRPF4B-209ENST00000494674 FTSJ3Q8IY81 847 aaKnown RBP13.6□□□□□ -0.23
PRPF4B-209ENST00000494674 FAM208AQ9UK61 1670 aaKnown RBP13.59□□□□□ -0.23
PRPF4B-209ENST00000494674 NBPF6Q5VWK0 638 aa13.59□□□□□ -0.23
PRPF4B-209ENST00000494674 NBPF4Q96M43 638 aa13.59□□□□□ -0.23
PRPF4B-209ENST00000494674 ELL2O00472 640 aaPredicted RBP13.59□□□□□ -0.23
PRPF4B-209ENST00000494674 IPO8O15397 1037 aaKnown RBP13.59□□□□□ -0.23
PRPF4B-209ENST00000494674 HTATSF1O43719 755 aaKnown RBP13.59□□□□□ -0.23
PRPF4B-209ENST00000494674 KRT24Q2M2I5 525 aa13.59□□□□□ -0.23
PRPF4B-209ENST00000494674 TMEM57Q8N5G2 664 aa13.59□□□□□ -0.23
PRPF4B-209ENST00000494674 USHBP1Q8N6Y0 703 aa13.59□□□□□ -0.23
PRPF4B-209ENST00000494674 MAP3K5Q99683 1374 aa13.58□□□□□ -0.23
PRPF4B-209ENST00000494674 CADPS2Q86UW7 1296 aa13.58□□□□□ -0.24
PRPF4B-209ENST00000494674 ARHGAP45Q92619 1136 aa13.58□□□□□ -0.24
PRPF4B-209ENST00000494674 KDM3BQ7LBC6 1761 aa13.58□□□□□ -0.24
PRPF4B-209ENST00000494674 RGS12O14924 1447 aa13.57□□□□□ -0.24
PRPF4B-209ENST00000494674 ABCC4O15439 1325 aa13.57□□□□□ -0.24
PRPF4B-209ENST00000494674 TNS3Q68CZ2 1445 aa13.57□□□□□ -0.24
PRPF4B-209ENST00000494674 DDX17Q92841 729 aaKnown RBP13.57□□□□□ -0.24
PRPF4B-209ENST00000494674 DDX19BQ9UMR2 479 aa13.57□□□□□ -0.24
PRPF4B-209ENST00000494674 CACNA1FO60840 1977 aa13.57□□□□□ -0.24
PRPF4B-209ENST00000494674 BACH2Q9BYV9 841 aa13.56□□□□□ -0.24
PRPF4B-209ENST00000494674 ADAMTS7Q9UKP4 1686 aa13.56□□□□□ -0.24
PRPF4B-209ENST00000494674 ABCC6O95255 1503 aa13.56□□□□□ -0.24
PRPF4B-209ENST00000494674 GNAT3A8MTJ3 354 aa13.56□□□□□ -0.24
PRPF4B-209ENST00000494674 PDE4AP27815 886 aa13.56□□□□□ -0.24
PRPF4B-209ENST00000494674 ITPRIPQ8IWB1 547 aa13.56□□□□□ -0.24
PRPF4B-209ENST00000494674 LRRC59Q96AG4 307 aaKnown RBP13.56□□□□□ -0.24
PRPF4B-209ENST00000494674 ZBTB40Q9NUA8 1239 aa13.56□□□□□ -0.24
PRPF4B-209ENST00000494674 SIPA1L3O60292 1781 aaPredicted RBP13.55□□□□□ -0.24
PRPF4B-209ENST00000494674 CEMIPQ8WUJ3 1361 aa13.55□□□□□ -0.24
PRPF4B-209ENST00000494674 NPHP3Q7Z494 1330 aa13.55□□□□□ -0.24
PRPF4B-209ENST00000494674 IL17REQ8NFR9 667 aa13.55□□□□□ -0.24
PRPF4B-209ENST00000494674 RTF1Q92541 710 aaKnown RBP13.55□□□□□ -0.24
PRPF4B-209ENST00000494674 AXIN2Q9Y2T1 843 aa13.55□□□□□ -0.24
PRPF4B-209ENST00000494674 ABCA3Q99758 1704 aa13.54□□□□□ -0.24
PRPF4B-209ENST00000494674 ZNF335Q9H4Z2 1342 aaPredicted RBP13.54□□□□□ -0.24
PRPF4B-209ENST00000494674 LMOD2Q6P5Q4 547 aa13.54□□□□□ -0.24
PRPF4B-209ENST00000494674 MIS18AQ9NYP9 233 aa13.54□□□□□ -0.24
PRPF4B-209ENST00000494674 N4BP2Q86UW6 1770 aaPredicted RBP13.54□□□□□ -0.24
PRPF4B-209ENST00000494674 ZBTB7CA1YPR0 619 aa13.53□□□□□ -0.24
PRPF4B-209ENST00000494674 ANKRD24Q8TF21 1146 aa13.53□□□□□ -0.24
PRPF4B-209ENST00000494674 TSPYL4Q9UJ04 414 aa13.53□□□□□ -0.24
PRPF4B-209ENST00000494674 SPATA31A3Q5VYP0 1347 aa13.52□□□□□ -0.25
PRPF4B-209ENST00000494674 HDAC1Q13547 482 aaPredicted RBP13.52□□□□□ -0.25
PRPF4B-209ENST00000494674 BRINP3Q76B58 766 aa13.52□□□□□ -0.25
PRPF4B-209ENST00000494674 NHSL1Q5SYE7 1610 aa13.52□□□□□ -0.25
PRPF4B-209ENST00000494674 ERBB3P21860 1342 aa13.51□□□□□ -0.25
PRPF4B-209ENST00000494674 PLEKHG5O94827 1062 aa13.51□□□□□ -0.25
PRPF4B-209ENST00000494674 RWDD1Q9H446 243 aaPredicted RBP13.51□□□□□ -0.25
PRPF4B-209ENST00000494674 ZBTB7BO15156 539 aaPredicted RBP13.5□□□□□ -0.25
PRPF4B-209ENST00000494674 RGS3P49796 1198 aa13.5□□□□□ -0.25
PRPF4B-209ENST00000494674 HAP1P54257 671 aaPredicted RBP13.5□□□□□ -0.25
PRPF4B-209ENST00000494674 API5Q9BZZ5 524 aaKnown RBP13.5□□□□□ -0.25
PRPF4B-209ENST00000494674 BABAM1Q9NWV8 329 aa13.5□□□□□ -0.25
PRPF4B-209ENST00000494674 OVOS2A0A0G2JMS6 1433 aa13.5□□□□□ -0.25
PRPF4B-209ENST00000494674 C8orf34Q49A92 452 aa13.5□□□□□ -0.25
PRPF4B-209ENST00000494674 SCN11AQ9UI33 1791 aa13.5□□□□□ -0.25
PRPF4B-209ENST00000494674 PKD1L3Q7Z443 1732 aa13.49□□□□□ -0.25
PRPF4B-209ENST00000494674 ZC3H6P61129 1189 aaKnown RBP13.49□□□□□ -0.25
PRPF4B-209ENST00000494674 PDZRN3Q9UPQ7 1066 aa13.49□□□□□ -0.25
PRPF4B-209ENST00000494674 CPDO75976 1380 aa13.49□□□□□ -0.25
PRPF4B-209ENST00000494674 TAF7Q15545 349 aaPredicted RBP13.48□□□□□ -0.25
PRPF4B-209ENST00000494674 INTS3Q68E01 1043 aaKnown RBP13.47□□□□□ -0.25
PRPF4B-209ENST00000494674 SMC5Q8IY18 1101 aa13.47□□□□□ -0.25
PRPF4B-209ENST00000494674 CABLES1Q8TDN4 633 aa13.47□□□□□ -0.25
PRPF4B-209ENST00000494674 PTPRCP08575 1304 aa13.47□□□□□ -0.25
PRPF4B-209ENST00000494674 SOS2Q07890 1332 aaPredicted RBP13.47□□□□□ -0.25
PRPF4B-209ENST00000494674 AKAP4Q5JQC9 854 aa13.47□□□□□ -0.25
PRPF4B-209ENST00000494674 ZNF530Q6P9A1 599 aaPredicted RBP13.47□□□□□ -0.25
PRPF4B-209ENST00000494674 LGR6Q9HBX8 967 aa13.47□□□□□ -0.25
PRPF4B-209ENST00000494674 SOS1Q07889 1333 aaPredicted RBP13.46□□□□□ -0.25
PRPF4B-209ENST00000494674 FAM161AQ3B820 660 aa13.46□□□□□ -0.25
PRPF4B-209ENST00000494674 AMOTQ4VCS5 1084 aa13.46□□□□□ -0.25
PRPF4B-209ENST00000494674 PLEKHO1Q53GL0 409 aaPredicted RBP13.46□□□□□ -0.25
PRPF4B-209ENST00000494674 MEGF6O75095 1541 aa13.46□□□□□ -0.25
PRPF4B-209ENST00000494674 G2E3Q7L622 706 aa13.45□□□□□ -0.26
PRPF4B-209ENST00000494674 SLAIN2Q9P270 581 aa13.45□□□□□ -0.26
PRPF4B-209ENST00000494674 ATP10DQ9P241 1426 aa13.45□□□□□ -0.26
PRPF4B-209ENST00000494674 SLC4A2P04920 1241 aa13.44□□□□□ -0.26
PRPF4B-209ENST00000494674 PLEKHG2Q9H7P9 1386 aa13.44□□□□□ -0.26
PRPF4B-209ENST00000494674 SIRT2Q8IXJ6 389 aa13.44□□□□□ -0.26
PRPF4B-209ENST00000494674 CHMP4BQ9H444 224 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms